Dhop031719.1
Basic Information
- Insect
- Dorcus hopei
- Gene Symbol
- Arid5a
- Assembly
- GCA_033060865.1
- Location
- CM065425.1:17009118-17011974[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-25 1.2e-21 78.4 0.0 2 89 124 209 123 209 0.94
Sequence Information
- Coding Sequence
- ATGAAGCGGCTCGAAGGTGTAGAAGACGAATACCTGAAGCACAGAATCGCGAACGCTCTGGGGGGCTTCAGCGTCTCCTCGGATAACACGCGAATACTGTTCTGCAGGGACACCTTCGACTACCCCGAATTAGAGGGCCACGAACTTCTGTGCAATCACCTCGCGCCTAAACTCAAAGGACGACCGAGGGGCAAACGAAAAAAGCGGAGCCTCTCCCCCGGCTCCGAGAGCAACGAGTCTGAGTGTTCGATTACGATTATTACTTCGATTTCAAAAACTAAAATATTAAGCGAGGGGGCCATCAACGGCCTTCGAAGTGATGGGGGAATAGCCCCAAGGAGGAGCACGAGGACTATAGAGAATACCGAAAGCAAGGCGTTCCTCAAAAGGCTCTCGACGTTCATGAAGGCGAATCACACCCCCATAGGACGCATACCCTCACTGGGATACAAAGAGCtGGATTTGTTCTCGTTCTACGTAAAGGTACAGAAGTTAGGTGGTTATGATGCTGTGACGACGAATCGGCTTTGGAAGTCGATTTTTGATGATCTTAGTGGAAATCATGCAAGCACGAGCGCCGCCACTGTTATTAGGAGACACTACGAAAGATTTTTATTGGCATACGAACGTCATGAGAAAGGAGAAGAAAATAAGCCATTACCAGTGTCGGAAAGACGTAGACTTAAGAACAAATCCAATAGAAGCAGTGCAAGTGATGCTGAAACAAGTGAGGGTACATCAAGAAGTGGAAACAGCACCCCCGTCCCCCAGTTAGTTGCATGCACTTCTGCAAGAGCCTCTCCCCAACCATCGTGTTCATCCGCATCTGACTACAAAGAGCCTACCACGCCTGAGAAGGTAAAACCTGAAGCGAAAACATCATCTTTGAGGAGTGTGCGTGTGAAACCAGAGCGGTTGCGAGATCAATTATCAAAAACagaatcaaaattgaaaaacgaCATGGTAGTAGAAAATAACAatgtttttacaaatatttctgAATCTGTTGCTGAAAGTAACGAGGAGAATCAACCCCCCTCTACACCCGAAGACGTGGAATTTAGTGCGCCAGTTCTGGACATTGTTCAAACTAGTAAAATATTTGTGGATGTAAAACATGTAACTATCATCGAAAAGGATAATGAACCAATAACAAGTGCTGCGACGCCAGTGCAAAAAACCGTCGCAGAAAAAGCCCCTAGCCCCGTGGAAGGCAAAGAAAGCCTCCCACTTTTCGACGCAAGCAACGGCAAGCAAAATGATCCCCACGACGATTTAACAGAAACCCCCTTCAGACCTGCCACACCTGAAATCATAGACCTAGACTcagatatttacaaaaatataacatCTTCGAGCAGTAATTTTAACGAAACAATCATAGTCGAAGTTAAAAAGCAAAAGCTAGATATTTTGAAGCAAGGCGGATTGGAAGTAACACCCGTTTGCAATGCTAGTACATCCCCCCAAAGTAAAGAAGTGAGACCCTCAGTTATACACCAGGCCATAAACTCGAGCCGGGTGGAAATCATTCCGAATGAAAAACGCCAGATGCCGCCCCCTCTCAACCCTGCACTTCCAAAACGTTCAGTGCCACAACCAAAAACCCCTAAGCACGTGAATAACTTCGAAATTAGAAACATTTTCTCGCAGTCACCTCCAAAAGTGGTCCAATCCAAATCCATTTATTCACCATCAGAAAAGACGGTATACGGAGACCCAAAAGAAATATTTACCGTGGTACCACCACGCGTGCAAGCCCCGAAATTCATCGACCAACATATAAACAGACAAACGGGGGGTGGTATACTAGACCTAACGGTGAAAAGCCCCCAGAAACCGACAGTGGAAGTCATGCAAATTCCGCACTCCTCATACATCCCATTCAACATGCAAGATACAATGCAAAAACCAACGTTTAAATCACCCCCTTTGCCCCTACTTGACGGAAGGAAAGTCGGATCGAATTTAGAAATCACCCTGGTGGGGTCTAACGACCATGGTAAACAACACTTAACGAAACCATATCCTTACGACAAATATTTCTCAATGGACCACAGTAAAAACCATCATATGAGTAACAATAAAATGCCTCCTCAAAAAAGAAGTTTCACCGAAAACTTTATGGCTCATAAAATGCCAAGGGTTGAAGAGAAAACACGACCCACCTACTCCACGCAGATATACCCACCGAAGGACCACCACAAAAAGTCTGATTTCGAATCGAATGTTTCTACTTCATACTTCCACAACAAAAGTTCTAATGCGAGAGATCCTGTTGGGAAAAATCAATCGCATATACCTGCTTTGGGGGGTAAGCAATATCTGAACGTACCCCCTATGGTTGGAATGTCGAATTATCTCCCACATTTATCGGGGGTAGGCAAAGGAATACCGCCTTACATGCCAACGGTCGAAGCTCTATATTACTCCACCCTCCAAAGAATGTACTCTCCCAGTTTACCCCTGGTTCCTCAATTAATTCCAGTTCCCACACAAGAACAGTTGAAGTTCTACCAGGATCTCATGGTCAATAACTCTAGAATTAGGCTGCCCTTTTTCGCACAGGATGGAAATTCGGTGGACAGTAATTTGAAGAAACAATAA
- Protein Sequence
- MKRLEGVEDEYLKHRIANALGGFSVSSDNTRILFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSPGSESNESECSITIITSISKTKILSEGAINGLRSDGGIAPRRSTRTIENTESKAFLKRLSTFMKANHTPIGRIPSLGYKELDLFSFYVKVQKLGGYDAVTTNRLWKSIFDDLSGNHASTSAATVIRRHYERFLLAYERHEKGEENKPLPVSERRRLKNKSNRSSASDAETSEGTSRSGNSTPVPQLVACTSARASPQPSCSSASDYKEPTTPEKVKPEAKTSSLRSVRVKPERLRDQLSKTESKLKNDMVVENNNVFTNISESVAESNEENQPPSTPEDVEFSAPVLDIVQTSKIFVDVKHVTIIEKDNEPITSAATPVQKTVAEKAPSPVEGKESLPLFDASNGKQNDPHDDLTETPFRPATPEIIDLDSDIYKNITSSSSNFNETIIVEVKKQKLDILKQGGLEVTPVCNASTSPQSKEVRPSVIHQAINSSRVEIIPNEKRQMPPPLNPALPKRSVPQPKTPKHVNNFEIRNIFSQSPPKVVQSKSIYSPSEKTVYGDPKEIFTVVPPRVQAPKFIDQHINRQTGGGILDLTVKSPQKPTVEVMQIPHSSYIPFNMQDTMQKPTFKSPPLPLLDGRKVGSNLEITLVGSNDHGKQHLTKPYPYDKYFSMDHSKNHHMSNNKMPPQKRSFTENFMAHKMPRVEEKTRPTYSTQIYPPKDHHKKSDFESNVSTSYFHNKSSNARDPVGKNQSHIPALGGKQYLNVPPMVGMSNYLPHLSGVGKGIPPYMPTVEALYYSTLQRMYSPSLPLVPQLIPVPTQEQLKFYQDLMVNNSRIRLPFFAQDGNSVDSNLKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00465769; iTF_01257754;
- 90% Identity
- iTF_00465769; iTF_01257754;
- 80% Identity
- -