Dvas035320.1
Basic Information
- Insect
- Dolichoris vasculosae
- Gene Symbol
- nfxl1
- Assembly
- GCA_018907195.1
- Location
- JACCHY010000026.1:496821-499652[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2 4.9e+04 -5.0 1.9 15 19 123 127 123 127 0.85 2 16 0.35 8.7e+03 -1.7 0.4 4 10 158 164 158 164 0.91 3 16 4e-08 0.00099 20.5 13.7 1 19 172 189 172 189 0.99 4 16 1.5e-06 0.037 15.4 15.9 3 19 227 243 225 243 0.93 5 16 0.018 4.5e+02 2.4 14.1 1 19 278 297 272 297 0.89 6 16 9.4e-05 2.3 9.7 10.6 1 18 332 349 332 350 0.97 7 16 0.0068 1.7e+02 3.8 7.6 1 12 384 395 384 395 0.94 8 16 0.5 1.2e+04 -2.2 1.0 6 10 405 409 404 409 0.90 9 16 1.4e-07 0.0035 18.7 14.8 1 19 415 433 415 433 0.93 10 16 0.00031 7.6 8.1 7.0 9 19 481 491 479 491 0.90 11 16 0.0025 62 5.2 6.2 1 12 501 511 501 511 0.95 12 16 0.85 2.1e+04 -2.9 5.8 14 18 542 546 542 547 0.89 13 16 9.4e-05 2.3 9.7 6.6 1 12 583 594 577 594 0.91 14 16 2 4.9e+04 -4.8 3.2 6 10 609 613 606 613 0.87 15 16 0.0011 28 6.2 12.0 4 19 623 638 621 638 0.91 16 16 0.00017 4.2 8.9 13.2 1 15 683 696 683 698 0.98
Sequence Information
- Coding Sequence
- ATGAGAAAGTTTCGAAGAGCTCAAGCACAAAATCAAGCATCGATTGAAAAATATTTAGAAATAAATGTTATTGAATCTTCTAGTAGTGACGATGAAACTAAAGAAGTATTAGATACAGCAGTGGAGAAAGTTTTATTTAACTATCAATATGAAGGTGGTAATGTTAATAAAACCTTGTCATATTTAACTGAAACTTTTCAGTCTGGTGGAGCAGTTTGTTTGATATGCATTTCTTCAATAAAAAAAATTGATGCAATTTGGAGCTGCACCAAATGTTATACTTTTTTGCATTTATCTTGTATTCAACATTGGGTGAAAGATAGTTTAAGCTATAAACATGAAAAACAATTTACACCGGTATGGGGGTGTCCAAAATGTAGAGCAGAATATCAAGAAGATCAAATACCAAGAAATTATACTTGTTTTTGTGGTAAAATCAAAGATCCACCTTATCAACCATGGTTAATTCCCCATTCTTGTGGAAATATATGTGAAAAGTTTTTACAACCAAAATGTGGTCATAAGTGTATGCTTTTATGTCACCCAGGTTATTGCCCTCCATGTCCAAAAATGGTATCAGTTGCCTGTTTTTGTGGAAAACAAGCACCTTGTCCTCGAAGATGCAATGCTAAAGACTGGATTTGTGGAAAAATTTGTGATAAGAAATATATAACTTGTGAACATAGGTGTACAGAAAAATGTCATCCAGGTACCTGTCCACCTTGTACAAAAAATATAATTAGTGCCTGCAACTGCAATAATAAATCTGAGTTAAGAAAATGTAATGAATCATTTTGGTTGTGTGATAATCTTTGTGGAAGGTGCTTTTCCTGTAATGTTCATGTTTGCAAAGAATTTTGTCATAAACCAGGAGATTGTAATGGTTGTCCATTAGAGCATAATAGAACATGTCCATGTGGTAAAAAAAAATTTACAATATCATGTAAACAACAAGTACCAACATGTAGAGATACTTGTGGTAAATTATTAGACTGTGGGACTCATTATTGTAATATGAGATGCCATACAGAACAATGTGGACAATGCTTAGAAGTTGTAACAAAAACTTGTCGTTGTGGAAGTTTTAACAAAGAACTTCCTTGTATTAAGGAATTTCATTGTAATAAAAAATGTTTACAAATGAGGCTTTGTGGTAGACATCTATGTAATAAAAAGTGTTGTGACTGTTTATTAAAAAATAATTTTAATAGTTGTGAAAAATTGTGTGATAATACATTGAATTGTCGTAAACATAAATGCTCTGCCCCTTGCCATACTGGACCGTGTTATCCATGTCCTCAACTTATTGTTATTCAGTGTCCCTGTGGTAATAATAAAATTACAGTTCCTTGTGGAATTATCAAGAAGATTATACCTCCAAATTGCAATAAAATGTGTAAAATACCACCAATTTGTCATCATCTTAAGAGAGAGTCACATAAGTGTCATCAAGGTATTTGTCCACCATGTCGCAAGGTTTGTGGATTAACGTATAAAACATGTGGTCATAGTTGTGTTGCAGTTTGCCATACTAAGATATGGACCAAAGTTAGGCCAAATGAAGTTTTTAAGCCAATTGGACCATGGGATAATAAAAAAGAGAGATGGGAGTATAAATCTATTCCATGTCCTCCTTGTGAAGTATCTGTCATGGTTACATGTTTAGGAGGACATGAAATACTTTCAAGGCCTTGTTTCAAAGCTATTTCAACATCCTGCTTTAGAAAATGTGGTCAATTATTATTATGTACAAACCATAATTGTGAAAGACTTTGTCATAAGTTAGAAATAATTAATAATACTGATGATAACAATTGCATGGTGTGTGAAAAACCATGTATTTTTTCAAGACCAAAAGGATGTACACATATTTGTCCAAAATTATGTCATCTTGCTCCATGTGAACCATGTACACAACTTGTAAAAATTCGTTGTCATTGTGGTATTAACATACTTTATGTACGTTGTTCTCAACTTACCTCTTCTACTCCAGAAAGGCGCAATGAACTTTTAAAGTGTGGAAACCAATGTCCTAAAAATTACTCTTGTGGTCATCGATGCATTGATAATTGTCATGTTGGACCATGTTGTAAAGCTGAATATTGCAATAAAAGAGTTAAAATATTGTGTAAATGTAAAAGAATAAAAAAATATTTTTCATGCAATTCAGTACGTACTAGAAAAGCTACTGTTGATTGTGATGATATATGTCAAAAAGAAAAAAAAGAAGTTGATAGAATTCAAAAAATAGAACAAGGAAAGAAATTTAAAGAATTAAAAAATCAAAAAGAAATTGAAATGTTCGAAAAAAAATTCAAACCTAAAAGGAAAGGAAAAGATCGTTATCATAATAAAGAACAACTAAATGATAACAAAAATTCTTACAATTGGTTATGGATAACTGCTTTGCTTGTTATTGCAATTTTTATAATAGCAATACAAATATATCAAATGAATATTAAATTACTTTATATATAA
- Protein Sequence
- MRKFRRAQAQNQASIEKYLEINVIESSSSDDETKEVLDTAVEKVLFNYQYEGGNVNKTLSYLTETFQSGGAVCLICISSIKKIDAIWSCTKCYTFLHLSCIQHWVKDSLSYKHEKQFTPVWGCPKCRAEYQEDQIPRNYTCFCGKIKDPPYQPWLIPHSCGNICEKFLQPKCGHKCMLLCHPGYCPPCPKMVSVACFCGKQAPCPRRCNAKDWICGKICDKKYITCEHRCTEKCHPGTCPPCTKNIISACNCNNKSELRKCNESFWLCDNLCGRCFSCNVHVCKEFCHKPGDCNGCPLEHNRTCPCGKKKFTISCKQQVPTCRDTCGKLLDCGTHYCNMRCHTEQCGQCLEVVTKTCRCGSFNKELPCIKEFHCNKKCLQMRLCGRHLCNKKCCDCLLKNNFNSCEKLCDNTLNCRKHKCSAPCHTGPCYPCPQLIVIQCPCGNNKITVPCGIIKKIIPPNCNKMCKIPPICHHLKRESHKCHQGICPPCRKVCGLTYKTCGHSCVAVCHTKIWTKVRPNEVFKPIGPWDNKKERWEYKSIPCPPCEVSVMVTCLGGHEILSRPCFKAISTSCFRKCGQLLLCTNHNCERLCHKLEIINNTDDNNCMVCEKPCIFSRPKGCTHICPKLCHLAPCEPCTQLVKIRCHCGINILYVRCSQLTSSTPERRNELLKCGNQCPKNYSCGHRCIDNCHVGPCCKAEYCNKRVKILCKCKRIKKYFSCNSVRTRKATVDCDDICQKEKKEVDRIQKIEQGKKFKELKNQKEIEMFEKKFKPKRKGKDRYHNKEQLNDNKNSYNWLWITALLVIAIFIIAIQIYQMNIKLLYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -