Dvas024129.1
Basic Information
- Insect
- Dolichoris vasculosae
- Gene Symbol
- -
- Assembly
- GCA_018907195.1
- Location
- JACCHY010000017.1:1153775-1171881[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0046 1.1 11.2 0.4 1 23 1296 1318 1296 1319 0.95 2 12 9.2e-05 0.023 16.5 0.3 2 23 1388 1409 1387 1409 0.97 3 12 0.012 3 9.9 1.9 3 22 1558 1577 1557 1577 0.97 4 12 0.3 74 5.5 0.3 3 23 1598 1618 1596 1618 0.96 5 12 0.18 44 6.2 0.2 1 20 1696 1715 1696 1717 0.93 6 12 0.57 1.4e+02 4.6 1.7 2 19 1743 1760 1742 1761 0.95 7 12 0.35 85 5.3 0.3 1 23 1786 1809 1786 1809 0.97 8 12 0.01 2.4 10.1 0.3 1 23 1861 1883 1861 1883 0.97 9 12 0.07 17 7.5 0.2 3 23 2197 2217 2196 2217 0.94 10 12 1 2.5e+02 3.8 1.6 1 23 2441 2465 2441 2465 0.96 11 12 0.0097 2.4 10.2 0.1 1 23 2552 2577 2552 2577 0.96 12 12 0.00022 0.053 15.4 0.7 1 23 2579 2601 2579 2601 0.96
Sequence Information
- Coding Sequence
- ATGGATCTATTAAATGAATCAAAATGTAATTCAATTAGTAATGACAAAAAAGAACAAAATACTTTATTCGAGGAAAATACAAAAAACTCTACTTCAAAAAAAAAATTTTATAATACAGTGTTTGCAACCAAAATGAGAAATCGAAGAAAAGAAGAAAAATTGGAAAAGCTTGAATCCAAAGAAGGTTTGACTTCATGTAAATCAGTTTCAGTAGATGTAATGCGTCTTTCTTCAAAAGTTGTGCCTGAATTAATATCTTCAATAGAGCATAAATATAGCAGGAAAAAAAAGTTCCAATGGAAGTTAGGTAAAACTAAAAAGAAAAAAAAAATATATGACAAATATAACAAGTTAATAAGAGTGTATGGGGAAGATATTAATACAAAAAATGATAAAAGTGAAAATAATGTTGATGAAACTTATGATTCAGAAGTAGAAGAAAAAGTAATAGTTATAGAGAAATTTGTTGAAAATAAATTAGAGTTTGCAATGGACAAAGATGATTCACAACGAAGAAAGAGTATGAGACATGTTATTCCTATGATGTTTTTTGATGAGAAGTGGGATTTTGAATCGAAGCCAGACAATGGACCTGTTCCAGAAGAAAAGTTTAGTTGCAGACGAACTGAATTTTTTGTTGAAAAATCTGAAAAAGATAATATTTTAATTACAAGCAAATTAATTACTGAAATCAATACAAATGTGGAACATAATGCCACTATAGAAACTTGTAAAAGTAAAGAAAATAATGAAAGGGTAGAAATTAATACAAATTTAGAAGGTATTAATAATAAAGTAGATTATAAAAATAAAGATAAAAGTACAAGTATAGTGGATACTTTGAAAAATGATGAAAATAAAGTGGTTATTCAAGAATCAAACAATTTATTGAAAAAAATTATTGAAACCAAAGAATATATTCAAGTTGAAGAACTAACTTGCAGGCGTACAATCCCATTTATAGGCAAAATTTCACAAAATACTTTACCTGATGATTCTGAAAGATCCATAGAAATAGATTCTATTACTAGTATTTCAAATAATAAATCAGATTCTTCTAAACAAATGATTGCAAAATCAGATTCTTTAGAAAATTTAAATCTTGAATTAATTTCGTCTATTGATACTGATACAAAAATTAATTCTGTAAATAATTTAACTACAGAATTATATATTTCAACTAATAATATAAAATCAAAACTGGATAAATTATCAAAGAATAAAAATAAATTAAAATGCTCTAAACAAAATCTTAATTTAAAGGTAGATTTTTCTAATGAAGTAGGTGTTAAAGAAAATTTATGTGTTAATGTGAAATTGGATACTTTATCTGATACTTCAAAAGAATCTTCATTCAGTGACAATAAAAAAGAAATTTGGAGTTGTCGAAGAACAGAACTTTATTTGGGTAAAAATTATCCTAATTGCAGTAGAACATTACCTTTTGTGTATTCAATGAATAACGTGAAACCTCGAGATACAGTAAGTATCAGTACAACATGTAATAATATAAATTCATTATCTGAAAGAGTTACAAATAGATTACATCCAGATAAATCACTTCAATTAATAAAGAACTTGAATGAAAATAAAAATGAAAACATTCCACAGAATCAAGAAAATGTATTAATTAATTCAATTACTAATACTTTTGTCAAAACGAGTAAAAGTAGTATTTCTGATGCCTCGATATATAATGGAAAATGGAAATTTAGAAGAAAACGTCAAAAAATAAATTTAGATAACGAACAACAGGAAGAAGTTCGCCCTTCTAAAAAGTGTAAGGTGAAATTATCTCCGGATAAAAAATTACTTATAAATAAAAAATCAAGGGTTAGTTCTGTACCTCCAAAAAGGACAATTTGTTCTCTATTGTCTTTGAATTGCACGAAGCATGCTCATGGTTATTCACATAATGAATATCCAACGTGTCACAAAAAATTGACGCAAGACGTCTATGTCTTACTAACCAAATTAGAATGTATTAGTGATCCAATAGCTGTCGGATATTTTAAGAAAGTTAGTTTTACCGATAAAGTGAAGCAGAGTATAATTCCCTCCAGGAAAGATAAAGTAGATTGTGATAAAAAAAGTGTGGACTTCAACAATTTAAGGCGATTAGTTTTTTGTGAAAGTGATGGACAAGCAGCCAAAGATAATGTTTCTAGCATTAGTGAAAATACAAACTTTGATTCTAATTCTAATAATGATCAAATAAAAAATATGAAGAAAGATCAGAATAAAGTAATTCGACAAATTGAATCTGAAAACAGCGATAGTTCACCTACTGCTAGACGTAAAACTAGATCGAGAAGAAGATTACTTAGTAATAGTTCTGAAGATTCATCGAATATTATTTACAGCAAGAGAAAAAAGCATCCTGTCAATTATGTAGAAAACTTTAGTGATTCAGATACATTTGAATTCAGTTCCTCTGTCATGAAACAACAGAGAATACAATTACAGAATCGACGATTGACGTTGCATGGTCGCCGGAAACAAAGAACCTTTAGTAATCAAGATGCAGATGAAAATGATAAGGAGGTTGAAGAGTTTACCCGAATTGGTTTAACGAAGAGAAAAGGATATCTTAGTAGGAATGCAATCAGCTCAAGTTGTACATCACAGAGCTTTGTAACTGAAGATTTTGATACGTTAGATGACAATGTTCGGTCTCGTACCACAAGTATCATTGAGAATACGGAAATCTCGCGTATTCAGTCAATCAATAATAGTTTGAGTATAGAATTACCGAATGAAATGAAAGAACAAGTTTCAAATGAGCGGTTTCAAGTTCACGAAAATATAAACAAAGTAGAAGAAATCTCGCTGAATCATTTTAGACTTAGATCTCGCAACCAGGATTCAACTACGAGGCAGCTCAAGCATTCGCAGCAGTTCGAAATAATGGATAATAATATTGATCCAAGACAAGTTTCTAGTCGCAACATATTAATCCCAAACTTGGATCTTTCTTTTTCAAGTGAACAACTACCATTATCTCAGACTTTGAACAATAACGATTTTGTTAAGAAATCCAAAGTGCCCGCAGTTGATAAATTCTCTGACAATATTAGGAAAACTTTGAGCTCTTCGTCTAGAAGCGAGAAAAATAATTCTGTTATAAATGCCAGAAGACCTGATGCGCCAACTAAGTCATCAAAACAAATCAAAAGTAATCTCGTTGAAAGACTGAACAAATCTAAATCGAATCTGGAATTCTCATCCACTATTAACCAGACAACTAAAAATATGTCACTTACTAATCTCAAGGTTCAACTTATAAGATTAGAAACTGTTTGCGAGAGTTTCGAGGATTATTCAGCGAGTGAAATAGAGTTATTGACTAGAAAATATATTGATCTGCTAATGAACTCAAATTTTACCTGTGATACCTGGCGTAATTCCATTAACTATCATCGATCTGAAGGCTTTACCGACAAGCACACCGAACAAATCGACAATTCCGATTGCGTATCAGATGTTGATTCACAAGAAGAAAACGAAGAGTTAACTGCAGTAATAGAAGCTGAAGATATAAATAATATTTCTCGAACCACATCAGTTGTTGATAACAGTATTGAGATGCTAAAAGTAAAAACTTCAAAACAAATTGAAACTAAACTTGCATCGTTTACGACTTTGGAATCTGCGATAGCAACTCTCGTAGATGCAGAACCTGGCGAGTCACGTAATTTCGGAGCTGTTAATATTTCGGAAGCATTGAATAGTCCATCAAACACTGAATTAGAAAAGAAAAAGGAATCTATTGTACAATCACTCGAAGATAGACTAAATAATGAAAATCAGAATCAGCTAAAAACCAATGATAAAAAACAGTCAACAATGAGTTCTGATACAATTCTTGTAAATGGTACAACAATGTACCCCTGTTCAGCTTGTAATAAGATATTTGTTGTTGAGAACTCACTCAGACAACATCAAGTAGTTCATCACAAAGGTAATTCAAGTACTGTAGTTAATACTGGTTCTACCACTATTATTAACACTAATATTATAAGTACTACAATAACTACTGCTACTGCTACTTTTACTACTTCAAAGTCTCGTGCGAAACAAAAAAATGAAATTTCTGGTAGTTCAACTTCGAAAAAGTCGATGTCGAAATGTAAACGGAAATTTAGATATTTGGAAAGTCTTAAATGTACAATTTGTTCAGTGACATTCGATACGAAGGAGTTGCTTTTTGATCACATAATGACTCATAATGAGCAAGAGCTGCAGGAAGCATATAAAACAGCTAAGGCTAAAGCTCAGCAACAACATAGTGAGGGATCCAATAGTATGTCTGAGGAATCAGATAAGGAGATGGAGCAGACAGAAGTATCTCAAGTCAGCGAAGCAAATAAAAAGAAGAAGGAAAAGAATAGGAGAAATAAGAGTACAGATAGTAGTATTCGAAGTAGTAGATCATCAATGGATACCGAAGACGTGATTTTTGAAGATCCATTACGGAATACGAACACTAGAATTGGATCAATAACATTGGATGAACCACAAAAACAGACGTTAGATTTGGCATGTAACGAAATCATTGCCAACGTCGAACAAATCCCCGCGGGTACCGCATGTTCTAAGCCCATATCCATCTGTTATTGTCATGCTCATGAAACTACGACTCAAGATCTTCAAATTGAGATGGTCTTACTCTGCAAAACCTGTAATGTTGTCTTTCGCCGTCGCGATTGTTTTGAAGTACATTACAGAACGAGTCCGGAGTGCCGCAGGCGAAGAACTAATAATGAGGTAACCAAAATGCCTAAACTTTTCTGCAGTGGATGTCCCTGTGTGCTAGATTCACTTATGAATATGCGGGCACACCTGGAAATGCATGCAAGGAAGAATAGTCAAGGAACTGTCACTTTTATATGCAATATTTGTAAAGTTGCATTCTTTGGTGTGGGAGGAATTTTTTACTCACATTGGTTTAATCACACGAAGGCGCCGAATTTCGTAGCGAGTAGATATTCTTTTCCTAAGTTGTCGGTGGTTTCAGTATTAGAAGACTCAAATGTTGCTATGACAACTAGTAAGAGTCAAGAAGGATTCTTCTATATTGCTGAACATGTTTGTCGTCAGTGCAGATTGCCATTCAGTTCAGAACCTGAACTTTTAAAGCATAAAGCTAGCCCTTGCCAAACCCAACAACCTGTTACGCCACGTGTAGAATCTCAAGAAAGTAATCGTTTACAAATGATAAAGCTCATTTGTGATTTGTGTAAAAAATACTACGTTAGCAAAGAAAACTTTGATAGACACTGCAGTGAGCGGAATCATCTTAAAACTCCTATTACGAAATTTTCCCGACTGCCCATTAATGCTAATGAACAAGCCTTCGTCTGTAGTCTTTGTCGTGCAGTTAGTAAATCTCTTAATGATATGAAGGAACATTGGAAACGTATTCACAGTCCTATAATGGAATTGTACACTTGCAAGACTTGTAACATAATTCCTTCAAACGATGTCACGAATTACACGTACGAAAAGTTTGAAAGACACTGTCAAATTGTTCACAAAAGTGAGGTCATAACGTGTCTTGTGTATTTTGTCACTGCAAGGTATGTTTGTAATATCTGTAGATTCGGGTTTGAAACGGAAAAGTCGATGAAGGAACATCAGGTCGTACATCAAAAGAGATCGTCTCAGAATATTAACAGTAATGAAACAGTGACAATTGAACCGCAAACGACAACTCTTTGGCTAACTGACAAACAAGTGGCTCCTGACGGTGGTAGAAAAGTTCATCCTGTATATGTGCATTATCCCGGAATTAATGGAAATCTTAGTCGTTCAATTCCAATAATACCTACTCCAGTGCCAGTGAACACTCAAAATCAAAACCAATCCCACCTTCATAATCTAAATCAGATAAACGATAATCAGATAAGTTTTGCATCGAGTAACGTCAATAGTTCTAATACATGTACAGGATCAAATATTCCCTGCACGTCCATTACTAGTAGTTCTACATCGAATTCAATGCTGCGTGATATGTTGGCTCAGAAAGTATTTGACCCGCAACAGCCTCTACAACAAAATCATAGCAATTTGAACGTTGAAACGATATTGATCGATTCGAGATCCAATAGTCCAACATTAGATTCCAGAACTCATACTTCAAAGGATAAATCTACAAATAATGTTGATACAGGTGCTTCTTCAAGAAAATCTTATATGACAATGGTGAATCCAAACTTCGAATCAATGTTAGGAACAAACAGCAACTCCCAGATGGATGAGAGTAATAACGAAAGATCTCTATTGGATAAAGAAAATTCGGACTCTGGTGGAAATGGAATACCCGTTAGTGTGGATTTACTTACACCACAGCCATTCGAAGTAGTTCTGGTGACTGACGATTTAAGCGAAAGCTCAAACTGCGAATCACCAATTACAAATGATAGAAATAGAGCTACCATGGATAACATAATTGACGCTACAAATCCAGTTCCTAACCAACAAAAGCAACATCAGACAAAAGAGTGTAATGACGGTCCGACAACGAAGTCTTCCAAGTTCCTACGAGTACGTTCAATAGCTGAGCTCCAGCGCGTAAAGATCAATCTTTGCTCGATTTGCGGGTTGAGTTTTGACACAATCCAAGCTTTTGAACAGCATTCACTACAGCATGAAATAACTGGGGAGGTTAGTCGGATGACACCGGTGCAAATGATCTCGCCAATGGTTACACATGGTAATAAAGAGTTAAATGATCCACAAAATCTATTAATTTCTCAAATGAGGCAAAAAATGGCATTGTTGACACCTAATGGAAAAGAGTCACCAAACAGTTACGATTCGCTTAACAAAATGAAGTCAGCAATCCTTCCAAATCAATATCAACATCCACAACAGCAGCAACATTCCTACTGGTTTGCATCTTTTACTCTGACTGCTGCAGGTGGTAATTACTCGACTCGAGGTCCGCCGCCCCCTTATCCCAGTACCTCCAGCTCAATAACGCCGAGTCGGTCTAGTGCAATACAGTTGCCCGAAAGGAACACAGCGGGTAGTACTACGCCTACAACAAAACGACCTTCGGGCGCTGCTACAAGGATACCTCAACAAAGCTTACCAAGTTTTGGGGACGGTACTGAACACCGACAAACCAGTAGTCGTATTCCGTATACTTCGACCGAGGATGTGAACACAAGAATGATGACGGGCGCTGCTGTAAGACATTCTCATCATCTCCAATTTAAGAATTATAATCGACATTCCGGTGCATTCAACTATTCTAGCAGCATCGGCAACAATTCTTATCATCATTCTCAACAGCAACATCAATCAAAAATTATTTACAATTGTAAGGTGCAAAACTGCCAGTTTCGATCCGACAATTTTTCTACTCTCCGTGCCCATGAAAAGAATCACATGTTGAAAAATCAGCAGCTTTCCACGATGCCTAGTAGTCCAATTCAGCAGCAACGTCTTCCTATAAAACACGTACCAGTGAGTCAGATGCCCGAGAGACCGCGTCATGCCTTACCAACCAGTCGTCAGCCAACTCTTCCTAATATTTCGGATAAACGTTGCATTTGCCGTATCTGCAATCTTTATTGTGGATCGAATACCGAATTGATAGATCATTTATCACAATGCCACAATGTACCGAATAGTCAAGTCTGCTGTTATGTTTGTGATTACTGCCCTACACCACTCATTTTTGAGTCGGAGGACTTACTACGTAAGCATATGAACGTGAGTCACAATCATTTTTGTGAACTTTGCAACAAAAGGTATCCGTCAAAAGAAGACTTGATACTACACATGGAGGTGCACGCGAGAGGTACTTGA
- Protein Sequence
- MDLLNESKCNSISNDKKEQNTLFEENTKNSTSKKKFYNTVFATKMRNRRKEEKLEKLESKEGLTSCKSVSVDVMRLSSKVVPELISSIEHKYSRKKKFQWKLGKTKKKKKIYDKYNKLIRVYGEDINTKNDKSENNVDETYDSEVEEKVIVIEKFVENKLEFAMDKDDSQRRKSMRHVIPMMFFDEKWDFESKPDNGPVPEEKFSCRRTEFFVEKSEKDNILITSKLITEINTNVEHNATIETCKSKENNERVEINTNLEGINNKVDYKNKDKSTSIVDTLKNDENKVVIQESNNLLKKIIETKEYIQVEELTCRRTIPFIGKISQNTLPDDSERSIEIDSITSISNNKSDSSKQMIAKSDSLENLNLELISSIDTDTKINSVNNLTTELYISTNNIKSKLDKLSKNKNKLKCSKQNLNLKVDFSNEVGVKENLCVNVKLDTLSDTSKESSFSDNKKEIWSCRRTELYLGKNYPNCSRTLPFVYSMNNVKPRDTVSISTTCNNINSLSERVTNRLHPDKSLQLIKNLNENKNENIPQNQENVLINSITNTFVKTSKSSISDASIYNGKWKFRRKRQKINLDNEQQEEVRPSKKCKVKLSPDKKLLINKKSRVSSVPPKRTICSLLSLNCTKHAHGYSHNEYPTCHKKLTQDVYVLLTKLECISDPIAVGYFKKVSFTDKVKQSIIPSRKDKVDCDKKSVDFNNLRRLVFCESDGQAAKDNVSSISENTNFDSNSNNDQIKNMKKDQNKVIRQIESENSDSSPTARRKTRSRRRLLSNSSEDSSNIIYSKRKKHPVNYVENFSDSDTFEFSSSVMKQQRIQLQNRRLTLHGRRKQRTFSNQDADENDKEVEEFTRIGLTKRKGYLSRNAISSSCTSQSFVTEDFDTLDDNVRSRTTSIIENTEISRIQSINNSLSIELPNEMKEQVSNERFQVHENINKVEEISLNHFRLRSRNQDSTTRQLKHSQQFEIMDNNIDPRQVSSRNILIPNLDLSFSSEQLPLSQTLNNNDFVKKSKVPAVDKFSDNIRKTLSSSSRSEKNNSVINARRPDAPTKSSKQIKSNLVERLNKSKSNLEFSSTINQTTKNMSLTNLKVQLIRLETVCESFEDYSASEIELLTRKYIDLLMNSNFTCDTWRNSINYHRSEGFTDKHTEQIDNSDCVSDVDSQEENEELTAVIEAEDINNISRTTSVVDNSIEMLKVKTSKQIETKLASFTTLESAIATLVDAEPGESRNFGAVNISEALNSPSNTELEKKKESIVQSLEDRLNNENQNQLKTNDKKQSTMSSDTILVNGTTMYPCSACNKIFVVENSLRQHQVVHHKGNSSTVVNTGSTTIINTNIISTTITTATATFTTSKSRAKQKNEISGSSTSKKSMSKCKRKFRYLESLKCTICSVTFDTKELLFDHIMTHNEQELQEAYKTAKAKAQQQHSEGSNSMSEESDKEMEQTEVSQVSEANKKKKEKNRRNKSTDSSIRSSRSSMDTEDVIFEDPLRNTNTRIGSITLDEPQKQTLDLACNEIIANVEQIPAGTACSKPISICYCHAHETTTQDLQIEMVLLCKTCNVVFRRRDCFEVHYRTSPECRRRRTNNEVTKMPKLFCSGCPCVLDSLMNMRAHLEMHARKNSQGTVTFICNICKVAFFGVGGIFYSHWFNHTKAPNFVASRYSFPKLSVVSVLEDSNVAMTTSKSQEGFFYIAEHVCRQCRLPFSSEPELLKHKASPCQTQQPVTPRVESQESNRLQMIKLICDLCKKYYVSKENFDRHCSERNHLKTPITKFSRLPINANEQAFVCSLCRAVSKSLNDMKEHWKRIHSPIMELYTCKTCNIIPSNDVTNYTYEKFERHCQIVHKSEVITCLVYFVTARYVCNICRFGFETEKSMKEHQVVHQKRSSQNINSNETVTIEPQTTTLWLTDKQVAPDGGRKVHPVYVHYPGINGNLSRSIPIIPTPVPVNTQNQNQSHLHNLNQINDNQISFASSNVNSSNTCTGSNIPCTSITSSSTSNSMLRDMLAQKVFDPQQPLQQNHSNLNVETILIDSRSNSPTLDSRTHTSKDKSTNNVDTGASSRKSYMTMVNPNFESMLGTNSNSQMDESNNERSLLDKENSDSGGNGIPVSVDLLTPQPFEVVLVTDDLSESSNCESPITNDRNRATMDNIIDATNPVPNQQKQHQTKECNDGPTTKSSKFLRVRSIAELQRVKINLCSICGLSFDTIQAFEQHSLQHEITGEVSRMTPVQMISPMVTHGNKELNDPQNLLISQMRQKMALLTPNGKESPNSYDSLNKMKSAILPNQYQHPQQQQHSYWFASFTLTAAGGNYSTRGPPPPYPSTSSSITPSRSSAIQLPERNTAGSTTPTTKRPSGAATRIPQQSLPSFGDGTEHRQTSSRIPYTSTEDVNTRMMTGAAVRHSHHLQFKNYNRHSGAFNYSSSIGNNSYHHSQQQHQSKIIYNCKVQNCQFRSDNFSTLRAHEKNHMLKNQQLSTMPSSPIQQQRLPIKHVPVSQMPERPRHALPTSRQPTLPNISDKRCICRICNLYCGSNTELIDHLSQCHNVPNSQVCCYVCDYCPTPLIFESEDLLRKHMNVSHNHFCELCNKRYPSKEDLILHMEVHARGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -