Dvas003850.1
Basic Information
- Insect
- Dolichoris vasculosae
- Gene Symbol
- bab2
- Assembly
- GCA_018907195.1
- Location
- JACCHY010000028.1:1635748-1638637[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-13 5.1e-09 37.1 0.1 1 38 321 359 321 363 0.93
Sequence Information
- Coding Sequence
- ATGAATATCTCAGCACAGCAGTACTGTTTGCGTTGGAACAATCACAGTTCAAATTTTGTAACGGTATTTGAACAACTTTTGAAGTCTGAAGCTTTTACTGATGTCACTATTTCGGTACATGATGGAACTTCGATTAAATGCCATAAAATGGTGCTTGCTGCTTGTTCATCATATTTCCAGGATCTTTTCATTAAAAATCCTTGTGAACATCCAATTATTATTCTTAGTGATGTCAAATATTGTGAAATTAAAGCAATTCTCGATTATATGTACAAAGGGGAAGTTAATGTTGCTCAAGACCAACTTGCTGGTTTATTGAAGGTTGCTGCATTTTTAAAAGTGAAAGGACTTGTAGAAGATAGTGAATCCAATAATAGAAGAGAAGCTGAACCATCGTTATCTCCTACATCGGCGATTACCACTAGTACATTGAACAATGTTGCTCATAGCAGTGGATATGTGTCCCCGCCTCATATTCCTTCTTCTACTTTTATTCCATATGGTAAATCACCTGTAGAAAGAAATCATAATCATTTACCATTGTGGGCTGCTTTCCCAGGGCTACCTATGCCTCAACATCCTATTTCTGGACATCAGCCTCCACCACGCAGTCAACATTCAATTCTTGGTAGCTCTTATGAGAATTCTTCAGAAACTTCTCCTTTAAGCAGAAAAAAGCTCTCGAGTTTAATGGCTAACCGAGACACACCCATCTTAAGAAATGTCCTTGGTCAAGGACAAGCTGACAGTTCTCAAGGAATATCCACTGTACATCAAGATAAACAGGACTCATCGTTTTGTTCTAATAGCAATGGATCAACCCATGATTCAGATAGAAGAAACAGTGCAGAACTCTCAGAATCCATGATAGATGAAGATGAGAAGATTTCTCCACATAATTACATAGTTGGAAATAAATCAAGCGGTCCCAAGCCCGAGTGGAAGCGCTACAAGCAATATACCCGCGAGCATATCAGTGATGCAATGAACGCTGTGCGCAACAAGGAGATGAGCGCGTTGCAGGCTGCTAGGAAGTACGGCGTGCCCTCGCGAACCCTCTACGATAAACTGAAGAAAGCTGGGATTCTGCCGTCGCGAGGCGCCGCCGTCCTGAAGCGTGAGTCTTCACACTGCGGCAGCGCGCGCTTCCCCTACGCAAGCAGCATGAACGGAAGCGTGTACGGGGGTGGAGGTGGCGCCGCCCTTTCCGAGAGCGAGAGCGATACCAATGGGCCCGGAGTCTGCAAGGTCGAACCCACTTACGACTCGGTCCTGGCCATGGACATGTCTACGTCGACGCGCAGTCCAAGTCCAGCGCTTCAGTCGGTCGTAGCTTCCGGTCACAACTCCCAATTGAATGACCAGGTTGAGGACCTGTCCCTGGGCCGTGGCGCCTCAGCTCATGATGAAGATAACATCAACGACTCTGATTGTTCCAACCGCGTCTGA
- Protein Sequence
- MNISAQQYCLRWNNHSSNFVTVFEQLLKSEAFTDVTISVHDGTSIKCHKMVLAACSSYFQDLFIKNPCEHPIIILSDVKYCEIKAILDYMYKGEVNVAQDQLAGLLKVAAFLKVKGLVEDSESNNRREAEPSLSPTSAITTSTLNNVAHSSGYVSPPHIPSSTFIPYGKSPVERNHNHLPLWAAFPGLPMPQHPISGHQPPPRSQHSILGSSYENSSETSPLSRKKLSSLMANRDTPILRNVLGQGQADSSQGISTVHQDKQDSSFCSNSNGSTHDSDRRNSAELSESMIDEDEKISPHNYIVGNKSSGPKPEWKRYKQYTREHISDAMNAVRNKEMSALQAARKYGVPSRTLYDKLKKAGILPSRGAAVLKRESSHCGSARFPYASSMNGSVYGGGGGAALSESESDTNGPGVCKVEPTYDSVLAMDMSTSTRSPSPALQSVVASGHNSQLNDQVEDLSLGRGASAHDEDNINDSDCSNRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464075;
- 90% Identity
- iTF_01219002;
- 80% Identity
- iTF_00464075;