Basic Information

Gene Symbol
osa
Assembly
GCA_018907195.1
Location
JACCHY010000029.1:2459137-2471590[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-09 1.6e-05 26.6 0.0 48 89 7 45 5 45 0.91

Sequence Information

Coding Sequence
ATGAGATTGTATCTTTTTCAGGTTACTAAAAATAAAACATGGAAAGATATTGCTGGTCTTTTGGGAATTGGTGCCAGTAGTAGTGCTGCTTATACATTACGCAAACATTATACTAAACATTTATTAGCTTATGAATGCCATTTTGATCGTGGTGGGGTTGATCCTCAACCAATAATAAATCAAGTAGAAGCTGGATCAAAGAAAAAAGTATCGAAAGGTGCATCATCTGTACCTTCTCCAGGATCATCCAACTCTCAAGATTCTTTCCCAGCAGGTGGATCAAATAATACACCTATAGATGGTTATGGTAATTATCAAAGCAACTATTCTGGAAATGCAACAGCAGTTTCATCTGGGGATTATAATCCACCTCCTCCTCGGCCGCCAAGTCAAAGTAATACATCTTCACATCAAAGTATGCAGCAAAGTAATTATCAGAATACTCCATCATTTCAAAGTTATCCACAGGATCAATATATAAGACCACAAACTAGCACAATAACTCAACAAAATGAATTTAATCAACCTTATTCTAATCGACCTCATTATCCTCCTTATGTTGCTGATGTTGATAGAACTTACACTGGAGGTAATTTAGCTCCAAGTAATAGTAGTGGTCAAGATATCTATAATAGATATAGTGGAAGCCAACAAGCTAGTAATTATTCTGGTGTAGCATCACCTGGAAATAGAAGTACATATTCTACAGCATCACAAAGTCATTCATCAAATACACAACAAACAGTTTCAGCTCAGCAAACAACTCCTCAACCACAATCAACTACAGGAACAACGTATGCATGTCCTCAAGATTATTACAGACAGGATCAGGGTTCCTATGGAAGTTCTCTTGGAAATCAAATTTATGCTAATCCAGGGACAGCTAATAAAAACATGCCTCCTCCATCATCAGGACCGCAACAACCACGACGACATCCAGATTTTGTTAAGGAACAACAATATTCAACATATAATCAGCAAAGAGCAGGATATCCAGGTTGGCCAGTAGGAACCAATCAATTTAGTAGTGGAACTAGTGTTAGAATGCAATATCCAAATCAACATCCATCAACATCTTCTCAACATCAGCAAACACAACAGACTCAAGCAACTGGTACTACACCTGTATCTTCGACAATTGGCATGAGTAGTGCTCAGCAATGGAGTAATCAACAAAATACAAGAGCATCTACACAAACAAGTATAAACTCTTTGGTTCATGCACCATCTCCTTGGGATCATAGATATAATCAAACTTCATCTTTATATCCACCACCTGGATCTCATCAGGTGATTGATTAA
Protein Sequence
MRLYLFQVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKVSKGASSVPSPGSSNSQDSFPAGGSNNTPIDGYGNYQSNYSGNATAVSSGDYNPPPPRPPSQSNTSSHQSMQQSNYQNTPSFQSYPQDQYIRPQTSTITQQNEFNQPYSNRPHYPPYVADVDRTYTGGNLAPSNSSGQDIYNRYSGSQQASNYSGVASPGNRSTYSTASQSHSSNTQQTVSAQQTTPQPQSTTGTTYACPQDYYRQDQGSYGSSLGNQIYANPGTANKNMPPPSSGPQQPRRHPDFVKEQQYSTYNQQRAGYPGWPVGTNQFSSGTSVRMQYPNQHPSTSSQHQQTQQTQATGTTPVSSTIGMSSAQQWSNQQNTRASTQTSINSLVHAPSPWDHRYNQTSSLYPPPGSHQVID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01216573;
90% Identity
-
80% Identity
-