Basic Information

Gene Symbol
osa
Assembly
GCA_018907195.1
Location
JACCHY010000029.1:2431516-2449599[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-14 3e-10 41.8 0.0 2 51 848 897 847 903 0.93

Sequence Information

Coding Sequence
ATGGCTACGAAGCAAGCCGAGAGCCAACAAAACGATGTGAGATCTAACGAATCTGTGATATGCGCGCAAAAACATTCATCTTGCAGTGGAAGTAATATCGGCGTGACTGTGAAACAGCAGACAGATTCAGAATCAACTGAAGAGATTAACCGAAGTTCAGTTCAACATTTTAAATATGTGAATCGGGATTTGACATTAGAGATGAGTCAATATCGTGCCGAGGATATTAGCGGACACTCTACCGGTGAAGTAAAATCACCTCGCGAACTACATCAGGAGTCTATAGTTAAGTCCGAATCGCTAGATATTTCTTCACATTCATCTCATTCTTTTACATCGAGTCAAGTTCGTTCAGATTATTCTGAAGAGTATGTGGCTAAACCTTTGCCAAACGAGTATTCAGTTAGTAAACAAGCCTCTACTGAGTATTCTTCAAAATCTACTACAGAATTTTCTGCATCTAAACAACTTGAAGCATATCATGCCAAGCAATTACATAGTGAAACAGACAGAATTCACCAAAGTGATGTAGAAGATAATTACACTGTTTCAAAAATGGAGTCCAGACATAGTCATTCAGCTCCAGGTGCAGTACCTTTTACAGGACAACCAAGATTTTTGTCTGGACAAAATATATCCCAAGTAACTGGACAGACTCCAACATTGAATCAATTGCTTCAAGCATCTAGTCCAGTTCATCGATTTCATAGTAGTTATCCCTCTATTGGACCAGAATCTTATCAGCAACCATGGCCAATGCAAAGGCCTTCTGTTGTACCACCGGTATATCCTCAGCCAAGTCAAAGACCACCACAAACGAGTTCACCACGATTACATCATGGTCCTGGAGGTCCTAGTTCTCCTACCCCTATGCCTTATCAATCATATAGTCAACGCTTTTCTTCACCTGCACGATCCCATTCGCCTTATAGCCATCATCAGTTAAATTCATATGCTGTACCAGCTAGCCATGCATCAAATTTGTATGCTGATCAAAGAGGTTGGAATCAAACTACTGCTACAAATCCATCTGTGCCACCACCAACAAATCAAGCTAATTCTTCCAGTCAATCTCCTCAACGTGCATTATCACAATCTCCTGCCCCACCACCTTCAGCATCACCTCAACCACAAACTTCTAACCAACCACAGAACTTTCATGGTATACAGCAGCGATCAACAACTCCTAATACCCAAGGAATTGATTCTGGGGAATTATCTGGACAAAATAGTAATGATAGTTCAAATGGGCCAGCTGGTCCAGCTACTCCAAATTCACAAGGAATGAGGCCAACTCCTTCACCTACAGGTTCATCTGGATCTCGATCAATGTCACCAGCAGTTGGGCAACAAAGTGTGCAAATGCCACCTAGACCATCGAGTGGTCAGTCAGATAGCAGTGGACCAGCTCGAATGAGTCTTTCTCCATTAGCTACACAAGATTATGAAAAAACTTTAGGTCCATCACCACACGTACATAATTATAAGACGAACAACAACAGTCAAAGTGCTACTCAATCAAGTTCTGGTTCAAGTCTCAGTAACATAAGTTCAATAGCAGTGGGAATTGGATATGCAAATGCTGGAACGAATCAGGCAATTGGATATTCATCTCAAGGAAATTATCCAACACGTCCTCATTTACAGTTTTCTCAGACATATCCTCCTGGAAACAATTCACAAACATCAAGTAATAATCAATATCAATCAGGCAGACCAAATAATATGGTGCAATATCCATCATATACTCACAAAATTGGTTTCAATAGTTTACCATCAGGAATGCCACCTAGTCCTGGTCCTCCACAAGCATATAATTCTGCTAGTACATCTACTAGTATGGTTCCACCAGTAACTTCAGCAATCCCAGGAATGAGTAATATGGGCCCACCAGCTAGCTCTATGGGTCCTCCAGCTCCATCTCCAAACCATTTGAGTAATCAACATACAAGTGGATCTGCTTCGGTGATGCATATCCATAATGCAGTTAATCCAACTTTGAATTCTGAAGGAAGTCCTATGCCACCACCTAGTACTACACCAAATTCTCATTCTGTTTGTGGTCCAACATCAAGCAGTCATAATATTGTAGAATCTACTATTCATTCAGATCTTCCCAATGATGCAGGTACAATTAGTAATGCTCCTGCTTCAACAATTGCAATTGTAACAACATCAAGTAATACCGTTACTTCTGTCATAACGACTGGTCCAGATGGAACATCTTTAGATGAAGGATCTCAACAATCTACACTTTCTAATGCTTCAGCTGCTTCTGGTGAAGATTCGGCATTTACACCGAAAGTTCGAAAGGAATTGATGGGGTATCATAGTCATCCCACAACACCTCAAAGTACAGTTCCATCACCAGGTGCTACAAGTATCAATTCTGTTCATGAAGATTATCCTGATATAAATAGTCCAGGTTGGCCACGTACACCAGCAAGTCCTGTATACAACAGTCATGTGCCTCAAGATCCATATAGATCTAAGAAATCAGATAGTTTATCCAAACTTTATGAAATGGATGATTCAATTGAGCGACGATCTTGGTTGGACAAACTTGTTGGTTTTATGGAGGAACGGAGAACACCAATAACAAGTTGCCCCACCATCTCCAAGAACCCCCTCGATTTGTTTCGATTGTATCTCTACGTCAAGGAAAGAGGGGGCTTCATGGAGGTATGCAAGGTGCAGTGTAGTTCCATTTAG
Protein Sequence
MATKQAESQQNDVRSNESVICAQKHSSCSGSNIGVTVKQQTDSESTEEINRSSVQHFKYVNRDLTLEMSQYRAEDISGHSTGEVKSPRELHQESIVKSESLDISSHSSHSFTSSQVRSDYSEEYVAKPLPNEYSVSKQASTEYSSKSTTEFSASKQLEAYHAKQLHSETDRIHQSDVEDNYTVSKMESRHSHSAPGAVPFTGQPRFLSGQNISQVTGQTPTLNQLLQASSPVHRFHSSYPSIGPESYQQPWPMQRPSVVPPVYPQPSQRPPQTSSPRLHHGPGGPSSPTPMPYQSYSQRFSSPARSHSPYSHHQLNSYAVPASHASNLYADQRGWNQTTATNPSVPPPTNQANSSSQSPQRALSQSPAPPPSASPQPQTSNQPQNFHGIQQRSTTPNTQGIDSGELSGQNSNDSSNGPAGPATPNSQGMRPTPSPTGSSGSRSMSPAVGQQSVQMPPRPSSGQSDSSGPARMSLSPLATQDYEKTLGPSPHVHNYKTNNNSQSATQSSSGSSLSNISSIAVGIGYANAGTNQAIGYSSQGNYPTRPHLQFSQTYPPGNNSQTSSNNQYQSGRPNNMVQYPSYTHKIGFNSLPSGMPPSPGPPQAYNSASTSTSMVPPVTSAIPGMSNMGPPASSMGPPAPSPNHLSNQHTSGSASVMHIHNAVNPTLNSEGSPMPPPSTTPNSHSVCGPTSSSHNIVESTIHSDLPNDAGTISNAPASTIAIVTTSSNTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDSAFTPKVRKELMGYHSHPTTPQSTVPSPGATSINSVHEDYPDINSPGWPRTPASPVYNSHVPQDPYRSKKSDSLSKLYEMDDSIERRSWLDKLVGFMEERRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVQCSSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00707629;
90% Identity
-
80% Identity
-