Basic Information

Gene Symbol
-
Assembly
GCA_018907195.1
Location
JACCHY010000006.1:2554159-2561192[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-17 3.4e-13 51.2 0.1 2 48 25 71 24 104 0.86

Sequence Information

Coding Sequence
ATGGCCCTGCAGCAGAGCCCCGCGAGCGCGCCCTCGACGACCGGGAAGGATCCCGTCAGCTACGAGAGGCTACGCGAGTCCTTCATCAGGGAGCTGCATCACTTCCACGACACCAGAGGAACACCGTTCAAGAAATGTCCAAAGGTTAATGGAAAAGAGGTGGATCTCTACAAACTTTATACACTGGTTACATCTCGTGGTGGATGGATACAGAAACGCGGGCGGGTTGAAAGGTTCCAAAAAACGGTGAAAAAAAGTAAGGATGAAAAGCGATTGGTCGCGCGAGCAACGGTGCAGCATCTACGGAAACTAAAACTAAGCCTAAGCGCGAGGATAACGCGGAAGTGGTGCAAGGTCAGGGTCATCCAAGGGAGGCACATTGGTCACAGTAGTGGGGGTAAGAGAGAGCCGAAAGAGAAAGACACACCGTCGGTGCCGGCGTCGCGCTTTGGAGCGAGTGAGAAAAAGCTCACTGCTCGCTTCTCACTGCTCGCTGCTCACTCTTATGGGAGGGGGGGGGAGATAGTAGAACGACCAAGAAAACTAGAGCCTGCCTGTGAGACTACATCGCTTTATTTTACTTTAACGCCGAACGTTCTCTCTTTGATCGATGATATAAAAGCGAGCAAAGGTGAAGTGCCGCATTTCAGTGCTCTTGCGAAATTAGGACTAGTTTTTGGACTCTAA
Protein Sequence
MALQQSPASAPSTTGKDPVSYERLRESFIRELHHFHDTRGTPFKKCPKVNGKEVDLYKLYTLVTSRGGWIQKRGRVERFQKTVKKSKDEKRLVARATVQHLRKLKLSLSARITRKWCKVRVIQGRHIGHSSGGKREPKEKDTPSVPASRFGASEKKLTARFSLLAAHSYGRGGEIVERPRKLEPACETTSLYFTLTPNVLSLIDDIKASKGEVPHFSALAKLGLVFGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-