Basic Information

Insect: Diuraphis noxia
Gene Symbol: zld
Assembly: GCA_001186385.1
Location: NW:79097-87617[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00027 0.018 14.9 0.9 1 22 261 282 261 285 0.90

2 5 0.14 9.6 6.4 3.5 2 19 691 708 690 713 0.88

3 5 4e-05 0.0027 17.5 0.3 1 23 719 741 719 741 0.98

4 5 0.00019 0.013 15.4 1.8 1 23 748 771 748 771 0.96

5 5 0.0037 0.25 11.4 6.2 1 23 777 799 777 799 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00027	0.018	14.9	0.9	1	22	261	282	261	285	0.90
2	5	0.14	9.6	6.4	3.5	2	19	691	708	690	713	0.88
3	5	4e-05	0.0027	17.5	0.3	1	23	719	741	719	741	0.98
4	5	0.00019	0.013	15.4	1.8	1	23	748	771	748	771	0.96
5	5	0.0037	0.25	11.4	6.2	1	23	777	799	777	799	0.99

Sequence Information

Coding Sequence: ATGGAGATGCAGATAAGCAACGCGTCCGAGTTCCCGTTGTACCACTCGATGGCGACGGGACCGCACTCGTTCCAGCTTCCCGGCGCTATACCACCAGTCAGCACCATGCCATCGTACAAGAACACCATGTTCCCTGACCGGTTGGGGGGCTTCTATTATGACTCGGCCGGCGTCACTCACGCCATKCCCGTTGAACGGTGTGACCGGTGCTACATAGAACTATCGGTGATCGGCAGTGGCCATCATTTTGGCAAGAAGATGTGCGGCATGTGCGCGGCGAAGGAACAGCAGGTGTCGCCCAAAGTGGAGACCGAAATACTGGACTTGGACTCGCAACAAGTCATGTcacaacagcagcaacaacaacagcagcagcaRCAGCAACAGGACACGAACAAAGGGTTTTTGCAGCACGGTGGCGTGGGCGTCGTCGTGCCACCCGGTTACGACAGACCGCCGCAACCGCCTCCACCGCCGCCGGCGGTTGAGTGGCCCGGCTACTTTCAGCCGCAGCAGAACACGCTGTCCGGCGAGCACCTGTCTCCCGATTACAACAACGTGTCGACCACAACCACCACACCGCCGACGATGATGGGCGGGTCACCGCCGTCGGACAtgcaacaacagcaacagtaCCAGGCCAACTTTGACGGTGGCGGGTAYGCGGTCGATTCGAACCAACAGCCCGGCGGAGGCGGAAGCGGAAGCGGCGGAGGGTCTGGGTCCGGTACCAAGGGGAACGGGTCGTGGAAGTCGAATGAGGCGAGGCGCGCCAAGACTTACGAGTGTCCGGCTTGCGATAAATGGTTCACCAGTTCTGGTCACCTTAAACGGCACTATGGCACTCAGTTGCACAAGAACGCGGTCAAGCAGAGTGGCAAACCAGATCCCGCGCTTTTGCCCATGAAACATCACTATCATCCGTACCGGGACCCGGCATACGTAGCGCAACAGAAGCTCAAGCAGCAGCAGCAGAACGGCCCGTCGTTGCACAAGCAACAGTCGTCCATGATGATGCCAGCCGACTTCCGCCCCGTCACGTCTACGTCATCGTTCAACACCGATTCTTTTTTAGAGCTGACTCCCCCAAACCTGACAGCAAGCCTCTCGGACAGTTTGGGGGGAACCCAATTCCTACCGGCCCGTCGGCCGgtcagcaacagcagcagcagcagcaacagcaacaacagcagtACGGCCGGTTTCACGGACGAGATGCAAATTTCTTCTTACcccaacaacaacagcaacaaatACCGGGCGGACCTAACGGCGGTCCACCATACGGACCGCCGCCAGGCCACGTCGTACCACGGCCACCGGCAGTCGACAGCGGGTCAACAAGCGCTTTCGGCATACCTGCACCACCCGATCACGGATACCATCCAGCCATACACCACCCAGGTTTCTATGATCCAACAAACTACCAACACGGATTTGTACACCACTATGCCCGACAGTAACGGCCGTGGTGGCCATCTGTACCATCGCCAGCTGCAGGAGCWGCCGTACCACCATGTCAACAACGTGGTCGTTCGCAATCCGCATCAGCACCAGTTGCCGCCGTCGCATCAAAGTCAGCAGCACCACCAACACCGCCATCAGCGAATCATCGAGTATCAACAACCGTCGTCCACGACCATGCAGCCGTCGGTATACCAACAACCGCAGCAACAAACCCATCAGCGCCAGTTGCATGTGCTGCAGCAACGCAACATCAAACAGGAACCATCCGAACTGGTCGAGTACAACAACGTTGACGACACTCCGATGGCCAGCCCGGACTCGAGCATtgatcatcatcatcatcatcatcaacacGTCCAACACCAGCAGCTGCACAATCATCGCCCGCAGTATCAAGGCCTGTTGGTGGTGGCGCCCATATCGCCGTCATCGCCGCCGCCATCGCTGCCTCTGCCGCTACATCAGACCGCCACCGACGATGACACGATGGTCAGCGACAGCGACATCGACCTGGACACCGGTTMGCCGCCGAACTTTAACTGCACGGAACTGTCGTCGTCGCACTCGGCGCTGGCCAAAAAGTTCCGGAAAGCCACCCGCGTAACGTGCGACATTTGCAACAAGGACTTCACGGACAAGTGTTACAAGACGCAGCACGACCAGAGGTTCCATAGCGGCGAGAAGCCGTACCGGTGCGGCGTGTGCGGCAAGCGGTTTGGCGAGCAAAAGCTGCTGCAGGTGCACGAGCTCCGGCACAACGACAGCAACAAGGCGTTCCCGTGCACGGTGTGCACCAAGAGCTTCAACTTCAAAAACGATCTGGACCGGCACTTCATGTCCAGCCACTCGGCCGAAAAACCGTACCAGTGCGTGCAGTGCGAGAAGAAGTTCGTGCGGCTGGACCACAAGCGGCACCACGAGAAGACGCACGACGACAATGTGGAGAAGtcgaaaaagaagaagaaggcGATGGCCGACACTAGTCGCTGGCACGACCACGGTGGCACACATCGGCAGCAGCTCACTGGCGAACTTCAATCGTAA
Protein Sequence: MEMQISNASEFPLYHSMATGPHSFQLPGAIPPVSTMPSYKNTMFPDRLGGFYYDSAGVTHAXPVERCDRCYIELSVIGSGHHFGKKMCGMCAAKEQQVSPKVETEILDLDSQQVMSQQQQQQQQQQQQQDTNKGFLQHGGVGVVVPPGYDRPPQPPPPPPAVEWPGYFQPQQNTLSGEHLSPDYNNVSTTTTTPPTMMGGSPPSDMQQQQQYQANFDGGGYAVDSNQQPGGGGSGSGGGSGSGTKGNGSWKSNEARRAKTYECPACDKWFTSSGHLKRHYGTQLHKNAVKQSGKPDPALLPMKHHYHPYRDPAYVAQQKLKQQQQNGPSLHKQQSSMMMPADFRPVTSTSSFNTDSFLELTPPNLTASLSDSLGGTQFLPARRPVSNSSSSSNSNNSSTAGFTDEMQISSYPNNNSNKYRADLTAVHHTDRRQATSYHGHRQSTAGQQALSAYLHHPITDTIQPYTTQVSMIQQTTNTDLYTTMPDSNGRGGHLYHRQLQEXPYHHVNNVVVRNPHQHQLPPSHQSQQHHQHRHQRIIEYQQPSSTTMQPSVYQQPQQQTHQRQLHVLQQRNIKQEPSELVEYNNVDDTPMASPDSSIDHHHHHHQHVQHQQLHNHRPQYQGLLVVAPISPSSPPPSLPLPLHQTATDDDTMVSDSDIDLDTGXPPNFNCTELSSSHSALAKKFRKATRVTCDICNKDFTDKCYKTQHDQRFHSGEKPYRCGVCGKRFGEQKLLQVHELRHNDSNKAFPCTVCTKSFNFKNDLDRHFMSSHSAEKPYQCVQCEKKFVRLDHKRHHEKTHDDNVEKSKKKKKAMADTSRWHDHGGTHRQQLTGELQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01032525;
90% Identity: iTF_01033359;
80% Identity: -