Basic Information

Gene Symbol
NCOR1
Assembly
GCA_001186385.1
Location
NW:102194-124522[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-06 0.0019 17.7 0.0 4 43 491 530 489 532 0.98
2 2 5.5e-14 3.9e-11 42.3 0.1 4 44 836 877 834 879 0.96

Sequence Information

Coding Sequence
ATGGAAGCTGTACAACAAACAGTTATACATCTGGATCGTGCTGCAATGCCTTCACAAGCTCAAATGGCTTATCCTCAAAGAAATCCTCAAATTCACGGGAGAAATGTTAATCATGGTGTAGTTCAAGTACCAGGTGAAAATGGGCCATACAAGCCCTCTGCTGGTACTGGCcaagttcataataattttgttgggTACCCTGCCAATATACGATATGTTTCTCAACCTGTGTACATGTCGTCTACAACTACAGCATCAAATGTGTATAGAGATGCGCCTTTTCATTCTAGAGCATTAAATatatctgATAGAGGAGTTACAATTGGTGTTCCTTTTGAATTAGCCAGAAGCGATATGATGCCTACCGTTGCTAGGCAAAATCGTATATCTTTGCTGTCTGCAACAAGTGATTATTATCAACGAAGTCGTATGCAaaTGGAACATTATCGAGATGAATCATTGAATCATAACTCTCACAATACAGTTTCTATGAACTTTATGAGAGAAAGACCAGATCATGGTCCCCCACCTCCTatgaaaaaaccaaaattactTCATCCTATTTCGCCTCAACCGCCTCTAAAAATTGATATATccGATCCTCCTTCTACAAGTGCATACAATCCTCAAGTAGAAGCTATTTCACCTACTATTGATGAACCAATGCCAGAATATAAAGTTACTAAAGTTAATGATATTActccaaaattaaataaacttgagagtgatataaatagtattaatcaAGAAATAGAAGACTTGATCAAGTTAAAAgaaaattatgaacaaaaagAATTGAATTCAGAAGTTACTAAAATAGAACCCGAAGAAGATACATTAAAAGAATGTGAAGAAGAAGACCAAATAAACTTTTTGACTCCAGTTCAACGAATTTATGCATCAAACagaaaaaaagcATTAGAATCAAGAATGAGCCTAGAAAAATTTGCCAATAAAACTGATcttcCTTTGTATAATCAACCATCAGATGCTGATATTTATCATGAGAATAGAAGAAagtattcattatttaaatccaCTTTATTGGAACATCTAAGGAAAAAGAAAATGGAGCAACTACARAAGAAAACTGAAATTACTGAAACTTATTCTAAACTGTATAAGGAATGGATACGTAgagttgaaaaaattgaaagctCACAAAAAAGAAAAGCCAAAGAAGCAAAACATAGAGAACTATTTGAGAAAGTATTCCCAGAGTTAAGAAAAGCACGTGAAGATAAAGAAAGATTTAATAGAGTTGGTGCTCGTATTAAAAGTGAAGCAGATTTAGAAGAGATCATGGACGGTTTACAAGAACAAGAGatGGAAGACAAAAAAATGAGGTCTTACGCTGTTATACCACCACTAATGTTAGACCCTCATGAACGACATTTAACTTACTTAAACAACAATGGACTTGTGTTGGATTATAAAACAGAGTATAATGAGagaaaatatgtcaatatttgGACACAGCAAGAAAAAGAAGTGTTTAAAGATCGCTTTATTGCTCATCCAAAAACTTTTGGTGCAATAGCATCTTTTCTGGATAAAAAATGTCCTTCTGACtgcgtacaatattattatttaagcaaACCCAAAGAGGAGTACAAAAGATTAYTACgcAAAGCTAAATGGCAAGCAAGACGCCGTACTGCTCAAAATCGGACACCCGCTAATAGTTCATTGAATTcgttagacattttaaattcaacttcTATTGGTGTTACAACTAGACTCCAACGAGAGCGCCAGGGCAGTGAAGCAGCATCATCAAATTTAGCACAAATTTCTGCAGCTCAAAATACAATAGCTGAAAATGAAGAGACTCCTGCATCTGTAGAAGTAGAAGTTGCTATTGAACAAGGTGCTAATAATGAAATCGAAACTTcactaacaaataaaaatcaaaataatgaatctgttaaaaatttgatacaGACATCAGTTACAACGTCACACACAagTGAATTAAAACCTGAATCCAAAAAGAAAGAAAGGCGAAAAGATGATAAATTAAAAGGAGAAAATACAAGTACGACTGATGAAGAATTAATGGATTCTCAACatgaaACTGGGTCTAAAGGAGATGTACCTAAAGGTATGTGTGCGGTTTGTAAAGCAGAAAATGTTGCATGTCCCAGGACTCTTAATCCATCAGATGCAGCACAATATGGTGTGAAACCAGAAGATATTATTCCTGGTGCTAGGGTTTGTAACACTTGCCGTTGTAAAGTGGTTCGATCCCAAAATCGTCGTGTAATATATTGTCCGTTACCATCTTGCCCTACTGTTCAGTCAAATAATAGAAGACCAGTTAAAAGATTACGACCCTTACCTGCCAAATGGAATACTGCTCAAGATATCATAGCTTCAGAATTTCaaATTGGTCCGACAACAACAAAATGTTGTTCAGCTTGCTTTAATCGTATTCAAAGACGATTAATGGCACTTGGAGTAGTAGGAACATCAAGCAATATTAGTACTGATACTTTAGATGGCTGGACTGATGAAGAAACCAATGCATTAAAGAAAGGAATTCGAGAACATGGCACTCGTTGGAGTGAAATAAGTAAATTAGTTGGACCAAATAAGAGCCACTATCAGTGCAAAGAGTTTTATTTTAGCTTCAGAAAAAAACTAGGTTTAGATCTTTTAGTACAGGAGTATAAAAAgACAAATGGTAGTGAACAAAAACCTGCTCTAACAGATGAAGAAGAGTCAGGATCTAGTACTTCTAGCTGTGATGAGACTAACCTTGTTTTGTGTGACAGTGATACTCAAAGTGCACCTTCACCAACAAATACTTTACCACAGTTATCTCCTCCACGTGATACCAATAGTCCGCTTCAAGCGAAATTGACTGCTAAAGAGGCTCGTGATAGTGAAAATTCTATTCGATCTACTGTTGTCAAAGAAGATTATGATAGTTCAGCTACTGAAACTGCTGATGAAGGGATTGGAGGTACAGCTGAAAATGAGTCTAATGTGTTGCAACATTCCAATAACGAATCTGAGGAAAAAGAAAAGATTGTAACTGATTTAAGTGTGTCAGATATTTTATCTGatgtaattgaaaaacaatttactaAAGAACATTCTAATCGAGAGaagGAGAATGGATCTATGCCTACAATATCATCCATACTTTTGGATCCTGAGTATCCTATTAAAGATAGAAATACAGGATCTAGcaataatgaaaacaaacaaCAGTCAATGGCTACAATATCAATGGTTCCTACACCACCTCGGGAACTTCACAATAAAGATGGTTTAGTTGTTGTTCAAGTACAATCTTCTAAAGTTTCTGAAGTTAGAGTTCCMGAAGGTGTAACTCTTGATTTAAGTATCAAAAGACCCAGAGAAGGAGATTCTTATTCCGATCCTCTGCCAATCAAACATGCACAACCCCCACCACCACCTGGTGCAATGTACAGAACTCCTCCCACACAAATTCatgaaacaaatacattttattctccACAGTATGCTGAATTGGGACGAAGTGGCAAGCAAGGTGAAATATATTGGACAAAAATATCGCCAGCAAGTAATCATGTCATGGTCCATCCATCGCAATCTGTTCCCCATGTAACTGTTAAACAGACATCGCACATAAAATTACCAAATAagGTAACGTCGCCTCAATTATCTGTAGCGAATGTTGTTTCATCAAAGTTATMCCCTAACATATTGAATAATTCAAAAGCTACTGGATCCATCATGCATGGTACTCCTGTCTCAGCTGCAACTTTATACATGCCTCCACAATCTAACCGTTATTCTCAGCCATCACAAGCTCCTGGTGGTTCTATTACTCAAGGTACTCCTGTTCACCAACGTATGTTACACAATTCAAATCAAAACATGAATGCagattattatcaaaaacgCAATCCTCAGCCTCAATATCAATCGAGACAGCCTCATTATAGTGAGCAACGACAAATCATAATGAATGACTATATTACTTCACAACAAATGCATTCTAATGTTGCTGCTCAATTTCCTCGAGTTCAAAAACCTCCAGTTACTAGTCAGATGTACTATCAACCTACTCGTCAAGGTGTAATACAACGTCATAATACGGCTCCTAAAGCAGCATCTCCACAAACTTATCCTCCAGGACACGAAGCCCTAGGATCTTTGGTTGATGTTGCAATAAGACAGCCCAGCTTACCAGTACCTTTAAATCATTCTGACGATAGACATAGAGAACAAGATCGCTATGTAAGAGGTTCTCCAGTTCCAAAACCTCATATGTACAGAGAGCAACAAAGACATGAGCATATGCAAAGGGAACGTGAAATAGCTGTGCAAAGAGAGCGAGAAATGCAAGCAGTTGCACAAATTAGAGAACAGCAGCAAAGAGATCAGTATATTAGAGATAAGCAAATGATGCATCATCGGCTTACTCCTGAACAACATTCAAGAATGGTCGCTGCTTCGTTTCAACAACAACATCAACGACAGCAAGAACAACCTAGAGTTATGCAAATACCTTCTACTGTCTCTTCATTTCAACAATCAAGATCAAATACTCCCGTATCTAGGAATCAAGAACCACCACCCaatatacaaaaTAGAGATAATGCTGGTAGTGGTAGAGTTTCAAGACAAGGCACAGAATCCCATGCGTTAACTGCAGCTAATTTAATTGATGCTATCATCACACATCAAATAAATCAGAGTAATGATGGAAATGGACATCTTCCTAGTGCTGCTCCAGTCACCAATCAGCAAGCACATCAACAGCAACGAGCTGGTGATAAGTTATTTCAAtcattCCCAGAAgcaaatgaaaaacaaaatttaaaaccacGAGGTAGTCCAGAAATGAGTCGTCCAGGAGAACCATATCCACTAGAACATCCTTTTAAAGAATATCCCTTTAATAACATGTTAGCTGCGGGCTTTGAGCCTCATACTTGGAAGCTTCGCCGTGCTCTACAACAAAAAGAATTTGAACAACAAATGAAAGATGACAATAGTCGAGTTCGCTTTTACCCAACTCAAGCGGATAAACCTTTATCGCCTTTAGATTATGTTAAAAATCGGATTGTTGAAGTAATGCGCACATCAGATGACGACAACAAAAATGAACAGGCTTACACTTATCCATTTTCAGCTGCAATTAATATGTCTGCATCGgctacacaaaaaaataatgaatcatCTGATCCaaatggtggtggtggtggatcTATGTTAACAGCCCAATATGAGCCAATGTCTGATGAGGATTAG
Protein Sequence
MEAVQQTVIHLDRAAMPSQAQMAYPQRNPQIHGRNVNHGVVQVPGENGPYKPSAGTGQVHNNFVGYPANIRYVSQPVYMSSTTTASNVYRDAPFHSRALNISDRGVTIGVPFELARSDMMPTVARQNRISLLSATSDYYQRSRMQMEHYRDESLNHNSHNTVSMNFMRERPDHGPPPPMKKPKLLHPISPQPPLKIDISDPPSTSAYNPQVEAISPTIDEPMPEYKVTKVNDITPKLNKLESDINSINQEIEDLIKLKENYEQKELNSEVTKIEPEEDTLKECEEEDQINFLTPVQRIYASNRKKALESRMSLEKFANKTDLPLYNQPSDADIYHENRRKYSLFKSTLLEHLRKKKMEQLQKKTEITETYSKLYKEWIRRVEKIESSQKRKAKEAKHRELFEKVFPELRKAREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLMLDPHERHLTYLNNNGLVLDYKTEYNERKYVNIWTQQEKEVFKDRFIAHPKTFGAIASFLDKKCPSDCVQYYYLSKPKEEYKRLLRKAKWQARRRTAQNRTPANSSLNSLDILNSTSIGVTTRLQRERQGSEAASSNLAQISAAQNTIAENEETPASVEVEVAIEQGANNEIETSLTNKNQNNESVKNLIQTSVTTSHTSELKPESKKKERRKDDKLKGENTSTTDEELMDSQHETGSKGDVPKGMCAVCKAENVACPRTLNPSDAAQYGVKPEDIIPGARVCNTCRCKVVRSQNRRVIYCPLPSCPTVQSNNRRPVKRLRPLPAKWNTAQDIIASEFQIGPTTTKCCSACFNRIQRRLMALGVVGTSSNISTDTLDGWTDEETNALKKGIREHGTRWSEISKLVGPNKSHYQCKEFYFSFRKKLGLDLLVQEYKKTNGSEQKPALTDEEESGSSTSSCDETNLVLCDSDTQSAPSPTNTLPQLSPPRDTNSPLQAKLTAKEARDSENSIRSTVVKEDYDSSATETADEGIGGTAENESNVLQHSNNESEEKEKIVTDLSVSDILSDVIEKQFTKEHSNREKENGSMPTISSILLDPEYPIKDRNTGSSNNENKQQSMATISMVPTPPRELHNKDGLVVVQVQSSKVSEVRVPEGVTLDLSIKRPREGDSYSDPLPIKHAQPPPPPGAMYRTPPTQIHETNTFYSPQYAELGRSGKQGEIYWTKISPASNHVMVHPSQSVPHVTVKQTSHIKLPNKVTSPQLSVANVVSSKLXPNILNNSKATGSIMHGTPVSAATLYMPPQSNRYSQPSQAPGGSITQGTPVHQRMLHNSNQNMNADYYQKRNPQPQYQSRQPHYSEQRQIIMNDYITSQQMHSNVAAQFPRVQKPPVTSQMYYQPTRQGVIQRHNTAPKAASPQTYPPGHEALGSLVDVAIRQPSLPVPLNHSDDRHREQDRYVRGSPVPKPHMYREQQRHEHMQREREIAVQREREMQAVAQIREQQQRDQYIRDKQMMHHRLTPEQHSRMVAASFQQQHQRQQEQPRVMQIPSTVSSFQQSRSNTPVSRNQEPPPNIQNRDNAGSGRVSRQGTESHALTAANLIDAIITHQINQSNDGNGHLPSAAPVTNQQAHQQQRAGDKLFQSFPEANEKQNLKPRGSPEMSRPGEPYPLEHPFKEYPFNNMLAAGFEPHTWKLRRALQQKEFEQQMKDDNSRVRFYPTQADKPLSPLDYVKNRIVEVMRTSDDDNKNEQAYTYPFSAAINMSASATQKNNESSDPNGGGGGSMLTAQYEPMSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018953;
90% Identity
iTF_01328563;
80% Identity
-