Basic Information

Gene Symbol
mybL_1
Assembly
GCA_001186385.1
Location
NW:42038-46658[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.0039 2.8 7.6 0.0 22 44 288 309 274 311 0.91
2 6 5.4e-11 3.9e-08 32.8 1.0 2 46 318 364 317 364 0.96
3 6 4.8e-08 3.5e-05 23.3 0.2 1 43 370 418 370 421 0.93
4 6 0.079 57 3.4 0.0 24 44 449 469 440 471 0.82
5 6 1.1e-13 7.9e-11 41.4 0.0 1 43 479 524 479 526 0.94
6 6 4.5 3.2e+03 -2.2 0.1 4 13 772 782 771 788 0.76

Sequence Information

Coding Sequence
atggaTGCGTATGGTAATTCAATACCAGGAACATCAAAAGAATTTGCAAATATAGAAACTACTGAATTAATTTCTACTTATGACTTTGATTGGTTGGAAAAAGAGTTCAAAGATGATGACACCAATGAAGATGTTAAAGTTCCTACAAGTATAGTTCaaagtttgaataaaaatgataattataaattaggccaaatcaaaacaaatccaaatattcaagatttttttgaagaaattaattgtatagattTTAGTCAAAATATTGTACAGAGTAAATATACTCTTGCAGAATTATTAGAACAGTGTaacaaatttattgatattttaggcCGTAATATAGTTTGTTTAGAAGAAATGACAAatgaaattaatagaaatattgaaGTTTCAAAAAGAAATGCAACCAAGGCTTTTAATTGTACTAAGTTTGAAAAAAAGGCCATGTCTAAGATTACAAtgaaacagttaaaaataaaagcacaTTTGgcgaatttttttaaaattggtttatCAAACTGCCCACGGAATCCTCATTTAAGTGAGTTATATGAAAGTGGTAGATTAATATTGTCTTGCAATGGTCGTTTTATACTTGAAGAATGTGTTGAAAGAAATCAATGGAATcaagagtttaaaaataaattagaaaaagcAATTCAtgctgaaatattaaataaaataaaaattcctatGCTAGAACAGCATTTACGTCTTGGTGTAGATAGAGATAAACAAAGTgatctaaatataaaacataaaattgaaattgaaatgaaAGATCTAGAAAAAGAAATggatattataacaaaaacccCATTTAAGCAGTTAGTCTTTCAGTTTATGGACTCAGACTCRAAGTATGATTGGTTACACATTGCAAAAGTAGTTGATAAACCTGATTTACAATGTCAAAGGTtttggaatttaattttaaaacctcATATATCAAGAGCTAAATGGACTAAAAATGAAGATGATCTTTTACTTAGAATTGTTGCAAAAAATGATGAAAGAAATTGGCAAAAAATAACTGATGAAATGGATACTAACCGGAATGAGTTACAATGTTTTGttcattatcaaaaatataagaaaatgaTTCACAAAAAAGGTAAATGGTCAAAACAAGAAGATCAGAAGCTTATAGAGGTAATTAAAGAAAATTCCATAGATACTATAATCAATTGGCAAAGAGTGTATTTTGCTATGCAAGACTATGGAAGATCTGTTGATCAAATTTATGCAAGATGGATGCATAGTTTAAAACCAGGCAttaagaaaggatttttaaGTGAtggagaaaaatatattattaaaaattctaaaatcaaaaatatacccCCATCTATAGTATCAATGAATCTGACTAATCGTACACCTGCACAAGTTCGTAATGCTTATCGTAGAATTGTGCTATATGATGAAGATATTTATAGGGGTGGTTGGACAGTTGACGAAGATAAAATGTTACTAAATGCTGTTAATTCACATACACCTAATGAATTTACTTGGAAACAAGTATCTCAACARGTACCCGGACGTAATGCAGAACAATGCCGCCATAGGttcaatttaattgataaaaaattaagacaTAATCCAAAATTGACCATTGACAACATTCCACGCCCATCACGACCTTTCAAACCTAAACAAATACAGTTTTTTCCAGAAGATGATTTAAATGAAAGAGGTTTacatgaaaaatttaaacacaatcGCCAATTGCTTAAAACATCTAATGTACCGATAGAAACAGATGCTGATCGTAAGTTGAAGAAATCATATTTGGAAAATAAGTTTGTTATTGCGAATTGTAATTTGTCAAGTAAATGTGATCTCTACAGACATGTACTWGATTACTTAGGAGCTAAGTTGGTTGTACCTGAAACTTTTGCTCATATGGATGATTTGATTGATAATGGACTTATGAGTATGATGACTTATATATCAGAGTGTTCCATTGARCTAATTACATTAGATTCAAGTAATGAACATAATTTGTGCGACCCATTATTGACCTATGAAGGAGTTCACAATGTTTTAAGAACAAGTGATATTACTAATTCCGATATAAGTGAAATAGAAGGCTTGGTAGATATAAGAATAAGAAATATTCAAAAGAAACAACCAAATGAAGGTATCAATACTGAGAattctatgaaaaataaaaaagatccACTATTACCATTAAACTTCATTGGTTCTGTACCACCAAATCATGagacatttaaaatgttgtatacatatacaaatgcTCTAAATTCAAGTATGAAAATTGATTACTTTAAAGATTCCAATATGCATTTTGATTGGGATGATGAAGAATCTAAGAAATTACATAAACGTCTTGTGGCTATTTTAAGATTGCCAGCATTATTTTCTAGTTTGATACCGTATAATACagcaaatataaatatgattgtaAATACTGAAGAGGTTAATGATGTTAATATGGTACAGCTttcaaattattctaaaattcaTTATTctcatactaaaaataaaaaatccaatttttctttaaaaaatgttttataa
Protein Sequence
MDAYGNSIPGTSKEFANIETTELISTYDFDWLEKEFKDDDTNEDVKVPTSIVQSLNKNDNYKLGQIKTNPNIQDFFEEINCIDFSQNIVQSKYTLAELLEQCNKFIDILGRNIVCLEEMTNEINRNIEVSKRNATKAFNCTKFEKKAMSKITMKQLKIKAHLANFFKIGLSNCPRNPHLSELYESGRLILSCNGRFILEECVERNQWNQEFKNKLEKAIHAEILNKIKIPMLEQHLRLGVDRDKQSDLNIKHKIEIEMKDLEKEMDIITKTPFKQLVFQFMDSDSKYDWLHIAKVVDKPDLQCQRFWNLILKPHISRAKWTKNEDDLLLRIVAKNDERNWQKITDEMDTNRNELQCFVHYQKYKKMIHKKGKWSKQEDQKLIEVIKENSIDTIINWQRVYFAMQDYGRSVDQIYARWMHSLKPGIKKGFLSDGEKYIIKNSKIKNIPPSIVSMNLTNRTPAQVRNAYRRIVLYDEDIYRGGWTVDEDKMLLNAVNSHTPNEFTWKQVSQQVPGRNAEQCRHRFNLIDKKLRHNPKLTIDNIPRPSRPFKPKQIQFFPEDDLNERGLHEKFKHNRQLLKTSNVPIETDADRKLKKSYLENKFVIANCNLSSKCDLYRHVLDYLGAKLVVPETFAHMDDLIDNGLMSMMTYISECSIELITLDSSNEHNLCDPLLTYEGVHNVLRTSDITNSDISEIEGLVDIRIRNIQKKQPNEGINTENSMKNKKDPLLPLNFIGSVPPNHETFKMLYTYTNALNSSMKIDYFKDSNMHFDWDDEESKKLHKRLVAILRLPALFSSLIPYNTANINMIVNTEEVNDVNMVQLSNYSKIHYSHTKNKKSNFSLKNVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00940407;
90% Identity
-
80% Identity
-