Basic Information

Insect: Ditula angustiorana
Gene Symbol: -
Assembly: GCA_963691745.1
Location: OY829500.1:4613103-4618299[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00011 0.0072 17.4 1.4 2 23 126 148 125 148 0.94

2 10 0.023 1.4 10.2 7.1 1 23 177 200 177 200 0.96

3 10 9.4e-05 0.0059 17.7 1.5 1 23 206 228 206 228 0.98

4 10 2 1.3e+02 4.1 0.3 2 21 228 247 227 248 0.92

5 10 0.27 17 6.8 3.8 1 21 256 276 256 278 0.90

6 10 6.6 4.1e+02 2.4 3.1 1 23 283 306 283 306 0.89

7 10 2.2 1.4e+02 3.9 0.0 1 20 326 345 326 347 0.89

8 10 0.94 59 5.1 1.4 1 20 363 382 363 385 0.88

9 10 0.00023 0.014 16.4 5.6 1 23 472 495 472 495 0.96

10 10 0.037 2.3 9.5 0.4 2 21 502 521 501 522 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00011	0.0072	17.4	1.4	2	23	126	148	125	148	0.94
2	10	0.023	1.4	10.2	7.1	1	23	177	200	177	200	0.96
3	10	9.4e-05	0.0059	17.7	1.5	1	23	206	228	206	228	0.98
4	10	2	1.3e+02	4.1	0.3	2	21	228	247	227	248	0.92
5	10	0.27	17	6.8	3.8	1	21	256	276	256	278	0.90
6	10	6.6	4.1e+02	2.4	3.1	1	23	283	306	283	306	0.89
7	10	2.2	1.4e+02	3.9	0.0	1	20	326	345	326	347	0.89
8	10	0.94	59	5.1	1.4	1	20	363	382	363	385	0.88
9	10	0.00023	0.014	16.4	5.6	1	23	472	495	472	495	0.96
10	10	0.037	2.3	9.5	0.4	2	21	502	521	501	522	0.92

Sequence Information

Coding Sequence: ATGTCCCTCATTTGCAATGGAGTTAAAAAACACTCAAGTGAAACGAAGAATGGTAAAAGACGAATTCGCGTTGACGACGCTTCAGCGCAAAGTTTCTCGGCTGAAGATGCTTTTCGTGGGTTCACGAAGTGCCCTGTAGTCTGTCTGGCACGGGCTGACATATCGCCGTATCTCAAGAGCATGAGCCAAAAATCCGCGGGAATAAGTCAACTACAGAACGGTTTATCGAAGTTAGAGCTCGCCGTTCACGCAAGGAGTCTCGCTGCCAAATGCTCGGTCTGCTTGCTCCGTGACGACTTAGAAGCCCTAAAGATGGCATTCCAAAAGGACCCCGACAGTCCCGTGTTCAAAACGCCGTTCAACATGGCCAAATTGAAGTGTAAAATTTGCGAGAAAGTTTACTCGAGTGAGAAAAAGTTGCAAAACCACCAGGAGAACAAACACATGATCATTTACAAGTCTAATGAGAAGGCGCAGAAGCGCGTGTCGTTTTCCGATCACGTGATAGTCCATGAAGTGAAGGAATATCACAAGTGTAGAAAATGCACAAGGATATTCGAGCACTACAAACTTCTCAAGTTACACATGAAACTAAAGCACAAGAAACGTAAGTGCTACATTTgcaattattgtaataaaaactttgtGGATAGGATGTTCTTCAAAGTGCACATAAAGTTGCACTGTGACGTATGCGGCCACCTGGCTCCCAACAAATCTAAGTACCTAGAACATAGACGTAACGTGTGCAGAGTTTTGAAACTGCACAAATGTAAAACATGCGAGTTGTCGTTTTTCAACTTCATGGACCTCAAGGACCATAGTTACGACCACATGCCAACTTTGTACGTGTGCGATGTATGTAAGGATAAGTTTATAACTAAATGTGCAATAGCGCATCATTTCTCGTATCTACATTCCGAGACACGTCCCACGTCTCTGTACACTATGCGTAACTTAGGTAGCGAGCGACTGTACTTGTGCAACTTTTGTGACGAAAGCTCTGTAGAGCGGGACGAGATAGAAGCACACGTAGCAATGTTACCGGACTTAACTAACCGTGCCATGACTGGTTACAAGGATTACTACTTTTGCGACCAATGTTTTAAGAAGTTTGATGTTGAAACAGATATGCTACAACACAAGTGGACGCACTTTTTAAAAACCAGTGACAACTCCCAACTGCGGCCTAAAGATGTGAAACCTAAACTGGAAATTAAAAGGATATTCAAAGTCGAGGAGGAAATTCCAGAATATATGCAACCGAAAGTAATGTTGGAGAAGATAAAGGTTGGCGGGAAAGAGTTGACGGATGCGGTTGATTTCGTGGATGTTAACTGCTTCAATGAGTTGACGGGAGAGATTAAAAAGCCCGTGGTTGATCCCGTATCAAAAAAGACGATCATTTCGAAACACCAGTGTCAGACTTGCGGCAAGTATTATTCGACGAACTACTGTCTAAATCGTCACATAGTAACCCAGCACTCTGACTATGAGAGCCTGAAATGCAagGTCTGCGAGGAAACTTTTGTCTGGCCTTCCCTCCTCACCAACCACAAGTGCATTCGTCTCAACCTACCGGAGATACCCTTCGACGATGCGAGACCTGAGATCCACTTTGACAACCTCCACGAGCTGAGAGCGTTCGATGACCTCCCCATCACCGATGACTACCTGAACACCGTGGACTTTGAAATACCAACCCCGATTGTAGAGCTGGTGGAATATGAGGGGCAGTATGGACAGAGACAGAACTGCTACGCTGGCTGCAAGATTGTGATGCAGGAAGTACCTATAGAGTTTTAA
Protein Sequence: MSLICNGVKKHSSETKNGKRRIRVDDASAQSFSAEDAFRGFTKCPVVCLARADISPYLKSMSQKSAGISQLQNGLSKLELAVHARSLAAKCSVCLLRDDLEALKMAFQKDPDSPVFKTPFNMAKLKCKICEKVYSSEKKLQNHQENKHMIIYKSNEKAQKRVSFSDHVIVHEVKEYHKCRKCTRIFEHYKLLKLHMKLKHKKRKCYICNYCNKNFVDRMFFKVHIKLHCDVCGHLAPNKSKYLEHRRNVCRVLKLHKCKTCELSFFNFMDLKDHSYDHMPTLYVCDVCKDKFITKCAIAHHFSYLHSETRPTSLYTMRNLGSERLYLCNFCDESSVERDEIEAHVAMLPDLTNRAMTGYKDYYFCDQCFKKFDVETDMLQHKWTHFLKTSDNSQLRPKDVKPKLEIKRIFKVEEEIPEYMQPKVMLEKIKVGGKELTDAVDFVDVNCFNELTGEIKKPVVDPVSKKTIISKHQCQTCGKYYSTNYCLNRHIVTQHSDYESLKCKVCEETFVWPSLLTNHKCIRLNLPEIPFDDARPEIHFDNLHELRAFDDLPITDDYLNTVDFEIPTPIVELVEYEGQYGQRQNCYAGCKIVMQEVPIEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325931;
90% Identity: -
80% Identity: -