Dang025969.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829500.1:6661874-6671547[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0052 0.33 12.2 2.4 2 23 425 446 424 447 0.93 2 12 0.0081 0.51 11.6 2.1 1 23 453 475 453 475 0.97 3 12 0.13 8.2 7.8 0.7 1 23 479 501 479 501 0.98 4 12 0.001 0.064 14.4 3.4 1 23 506 529 506 529 0.98 5 12 0.055 3.5 9.0 0.1 3 23 536 557 535 557 0.88 6 12 0.056 3.5 8.9 0.1 1 19 567 585 567 587 0.95 7 12 0.016 1 10.6 3.7 1 23 626 649 626 649 0.96 8 12 2.6 1.6e+02 3.7 0.0 2 16 672 686 671 687 0.89 9 12 0.29 18 6.7 0.4 9 23 705 719 701 719 0.94 10 12 0.00013 0.0082 17.2 0.1 1 23 725 747 725 747 0.98 11 12 4.5e-05 0.0028 18.7 1.4 1 23 753 776 753 776 0.97 12 12 0.095 6 8.2 2.5 2 21 784 803 783 806 0.93
Sequence Information
- Coding Sequence
- ATGGCCGCGTGTGCAGTGGTCGGATGCGAATCGCATCCGATAAGTACTCCCAACTATACGTTTCATAAGCTGCCACGCTGCTCGACATCGCGCTCGCTCTGGCTGCTGGCCATCGGCCGTCCGCTGCGCACAGCTATCAGCTGCACGAAAGTGTGCAGCCGCCATTTTGCGGAGTCCATGTTCGTGATGCGCGGCCGCACCAAGACGCTGATTCAGGACGCCATGCCGACCCTGTTCCTACCTACTCCCCCGAAGAAAAGGCAGCGTGTGAAGGCGACGGAGAGCGACGACGTGCTCGCCTGCCGCGTCTGCTTGGCGACGGACGCGCCGCTTTATACCATAGCGGGCAGCGGGCTCGAACACAAGTTCACGGAGCTCACTGGGACACCGCTGTCGGCGGCGGACGGTTTGCCGCAGCGGGTGTGCGCGTGGTGCCGCGTGCAGCTGTCGAAGTATGCAGCTTTCCGTGCGCGCTGCCAGCGGAGCCACTCGCTACTGAAGGCTCTACTCCAATGGAGCCCGTTAAAAATTACTGACATTTTGACCGTTGACCGGCGTTTGCACAAACTGACACACAACCTCACCGTGGAAAATATTTTCAGTTTCCAAAACCTCCCAGTTATAGAAAAAGTAcctttcataaaatttaaaaacgaaaGCACTCCATCTGAAGCACCTGAAGCCTCAGACTTCACTGAAATAGAATATTTAGAAGCCGATGTTTCCTATGATGCCGTTAAAGATGAAGCCATGGATGTTTCTGAACAAAATATCGAAAttgaacaaataattaaaaaagaggAATTGGAGCATGATTATAGTCACAAGCATTCAGAAACTGAAGCTGTTATGGATATTGAAGTGAAATCTAATGCAAATGACGTAGGCACGGATACTTCGGAAGAAGCAGTAGAAACAGGGATAAAAAAGAGTAGAGCAAAAGATAACGAAATTACAAGCGATGATTCAGATTTTTACACTAAAGATGATACCGATTACAAGGACACGGATCCTTCAGAAGatgatgaaatatttaaaataaggaatcgattaaaatataaaaagaacaGTGCTGCTGCTGATTTTCGCACAAAGCTAAGCAACACTAAATTCCATAATAGTAGGAGAAGGAAAAAAGTTGGCGACAATGTTTATCCCAATTTCGACTTTGAGCACTTTCAGAAAGAATATCATGTTTCAATCAGACTTTTGACCCCCGAAGAGCAGAAGCAAGAGAAAGAAGATCGGAAAAAAGCTAACAAAGCTCAATTATGCTGTGACATGTGCGGGAGGGGGTATAATTTTAAGGAAACAATGATAAATCATATGTTAATCCACCACTCGAGCTCGAAACCTCACGAGTGCGAGATCTGCCTGTGGCGATTCACGAAGAAACGGCGGTTGAACGAGCACCTGGACCGGCACCGGTTCACCTTCACCTGCGACACCTGCCGCTTCGTCACAAGGGACAGAGACGGGGCAAAAGCCCACTTCCTCACGCACCAAGGCAAAACCTACGAGTGCCCGTACTGCGATCGGTTTTACAACCTGAACCATTCCTACTTAAATCACTTGAGGAAACAGCATCCCGAAAAGAATGTGGCGTGCGACGAGTGCGGAGAGACTTTTGTCTCGGCGCGCGGGGTGCACATTCACAAGGAGTGGGCACACAGACCGAACGCAAAACCCACGACTGAGTTCAAGTGTTCAGAGTGCGATGTCGCGTTCTTGAGCGCGGCGGCGCTAAACAAACACAAAGACTTGACGCGCGCCGTGTCGCATGCGGCACTGCCGGCCTGCGCCGCGTGCGGCGACAGCTGCGACAGCGAGGTGGCGCTTGCCGCACACAAGGCGGAACGCCATCCGCCCGACCAGCACCACTGCGACGAGTGCAACAGCACGTTCGTGAGCGCGGCGTCGTTCAACACGCACGTGAAGCGGAAGCACCTCGGGCAAAGAATAGCCTCTCGATCTCGGCCCAAGCGGCGCAACTCCCTGCCGGAGGAACCCGTCGTCTGCGAAGTCTGCGGCACGGTCGTGAAGGTAGCTTCATCCTTGGAGCCTTATCTATCACACTGGCGATTTGCGACCGTGCTCAACTGTACTTTCATCCGTTTCAAGAACCCGAAGACGCTGCAATACCACCTGAACACCCACATGGCGACAAAGCCCTACGCCTGCCCCGAGTGCCCCAGGACCTTCGCCATGAAACAAGCCAGAGAGATCCACATGCGCGTGCACACCGGCGAGAAACCCTACAAGTGCAAGCTGTGCCCGATGGCATTCTCCATGCAGGGCAACTTCACCAGGCACTACAAATATATACATCTGGGTCAGCATAAAAACTTGCCCTGCGACCTGTGCCACAAAAGGTTCACTACGGTGGCGGGCAAGAAGCTGCACATGCGCTGCGTCCACAGCAACGTGCCGTGGCCGAAGCGCTCGAGGAAGTCGAAGAAAGCCGCAGCCGCTGCGGAAAACTGA
- Protein Sequence
- MAACAVVGCESHPISTPNYTFHKLPRCSTSRSLWLLAIGRPLRTAISCTKVCSRHFAESMFVMRGRTKTLIQDAMPTLFLPTPPKKRQRVKATESDDVLACRVCLATDAPLYTIAGSGLEHKFTELTGTPLSAADGLPQRVCAWCRVQLSKYAAFRARCQRSHSLLKALLQWSPLKITDILTVDRRLHKLTHNLTVENIFSFQNLPVIEKVPFIKFKNESTPSEAPEASDFTEIEYLEADVSYDAVKDEAMDVSEQNIEIEQIIKKEELEHDYSHKHSETEAVMDIEVKSNANDVGTDTSEEAVETGIKKSRAKDNEITSDDSDFYTKDDTDYKDTDPSEDDEIFKIRNRLKYKKNSAAADFRTKLSNTKFHNSRRRKKVGDNVYPNFDFEHFQKEYHVSIRLLTPEEQKQEKEDRKKANKAQLCCDMCGRGYNFKETMINHMLIHHSSSKPHECEICLWRFTKKRRLNEHLDRHRFTFTCDTCRFVTRDRDGAKAHFLTHQGKTYECPYCDRFYNLNHSYLNHLRKQHPEKNVACDECGETFVSARGVHIHKEWAHRPNAKPTTEFKCSECDVAFLSAAALNKHKDLTRAVSHAALPACAACGDSCDSEVALAAHKAERHPPDQHHCDECNSTFVSAASFNTHVKRKHLGQRIASRSRPKRRNSLPEEPVVCEVCGTVVKVASSLEPYLSHWRFATVLNCTFIRFKNPKTLQYHLNTHMATKPYACPECPRTFAMKQAREIHMRVHTGEKPYKCKLCPMAFSMQGNFTRHYKYIHLGQHKNLPCDLCHKRFTTVAGKKLHMRCVHSNVPWPKRSRKSKKAAAAAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462471;
- 90% Identity
- iTF_00462471;
- 80% Identity
- iTF_00462471;