Dang025977.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829500.1:6706359-6714171[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0033 0.21 12.8 2.2 2 23 419 440 418 441 0.93 2 11 0.3 19 6.6 5.1 1 23 447 469 447 469 0.96 3 11 8.4e-06 0.00053 21.0 3.3 1 23 500 522 500 523 0.96 4 11 0.019 1.2 10.4 0.0 3 23 530 551 529 551 0.93 5 11 0.092 5.8 8.3 0.1 1 19 561 579 561 581 0.95 6 11 2.8 1.7e+02 3.6 0.1 3 23 594 615 593 615 0.88 7 11 0.069 4.3 8.7 5.0 1 23 620 643 620 643 0.96 8 11 0.00028 0.018 16.2 0.0 2 23 666 687 665 687 0.97 9 11 9.1e-06 0.00057 20.9 0.1 1 23 693 715 693 715 0.98 10 11 0.029 1.8 9.8 5.4 1 23 721 744 721 744 0.97 11 11 0.013 0.84 10.9 0.7 2 23 752 774 751 774 0.95
Sequence Information
- Coding Sequence
- ATGGGCAGCTCTCCTGGCGGAGGAGTGTTTGACGAACATATATATCCGCATTGCGGGCTGCCACGCTGCCCGACGTCGCGCGCGCTCTGGCTGCTGGCCATCGGCCGCCCGCTGCGCACAGCTAACAGCTGCACGCAAGTGTGCAGCCGCCATTTTGCGGAGTCCATGTACGTGAGACGCGGCCGCACCAAGACGTTGATTCAGAACGCCATGCCGACCCTGTTCTTACCTCCTCCCGTGAAGATATGCCAGCGTGTGAAGCCGACGGAGAGCGGCGACGTGCTCGCCTGCCGCGTCTGCTTGGCGACGGACGCGCCGCTTTACAACTTAGCGGGCAGCGGGCTCGAACACAAGTTCACGGAGCTCACTGGAACACCGCTGTCGGCGGCGGACGGTTTGCCGCAGCGGCTGTGCGCGTGGTGCCGCGCGCAGCTGTCGAAGTATGCCGCTTTCCGTGCGCGCTGCCAGCGGAGCCACTCGCTACTGAAAACTGTACTCGCGCGGGGCCCGTTAAAAACTACTGACATTTTGACCGTTGACCGGCGTTTGCACAAACTGACACACAACCTCACCGtgtcaaaaatgttcagttTCCAAAACCTCCCAGTTATAGAAATAGCACCTCTCATAAAATTTGAAAACGATAACACTCCATCTGAAGCACCTGAAGACTTCACCGAAATAGAATATTTAGAAGCAGATGCTTTCGACGATGCCGTTAAAGATGTAGTCATGGATGTTTCTGAACGAAATATTGAAATTAGACAAAAAGTTCAAAGAGTGGAATTGGAACACGATTATAATCACAAGTATGTAGAAACTGACGCCGTTATGGATATTGAAATGCAATCTGATGCAAATGACGTAGGCACGGATACTTCCGAAGAAGCAGTACAAAAAGGGATAAAAAAGAAGAGAGCAAAGGATGGCGAAATTACAAGCGATGATTCAGATTTCATTACTAAAGATGATACCGATTACGCAGACAATGATTCTTCGGAAGATGAcgaaatatttgaaataaagaaTCGATTACAAGATAGAATTAACAGTGCTGCTGCTTATTGTCTCACAAAGCTAAACGACactgaatatcataaaattaacaaaaggaGAAAAATTGGCGACGATTTTTATCCCAATTTTGACTACGAGTACTTTCAGAAAACATTTAATGTGACAATCAGACGTTTGACCCCCGAAGAACAGAAGCAAGAGATAGAAGATCGGAAAAAAGCGAACAAAGCTAAATTATGCTGTGAAATGTGCGGAAAGGGATATAATTTTAAGGAAACAATGGAAAATCATATATTGATCCATCACTCGaTCTCGAAACCCCACGAGTGCGAGATCTGCCAGTACCGGTTCCGGCTGAAGTGTCAGATGCTCGACCACCGGGACCGGCACCGGCTCACCTTCACATGCAACTCCTGCAGCTTCATCACAAGGGACAGAGACGGCGCAAGAGCCCACTGCCTCACGCACCAAGGTAGCACCTTCAAGTGCCCGTACTGCGATCGGGTTTACAAACGAAACAATTCCTACTTAAGTCACTTGAGGATCCACCATCCCGAAAAGAACGTGGCGTGCGACGAGTGCGGAGAGACTTTTGTCTCAGAGCGCGGGGTGCAGGTGCACAAGGATCGGGCACACAGACCGAACGCAAAACCCACGACTGAGTTCAAGTGTTCAGAGTGCGATGTCGAGTTCTTGAGCGCGGCGGCGCTAAACAAACACAAAGACTTGACGCGCGCCGTGTCGCATGCGGCACTGCCGGCCTGCGCCGCGTGCGGCGAGAGCTGCGACAGCGAGGTGGCGCTTGCCGCACACAAGGCGGAACGCCATCCGCCCGACCAGCACCACTGCAACGAGTGCAACAGCACGTTCGCGAGCACGGCGTCGTTCAACACGCACGTGAAGCGGAAGCACCTCGGCCAGAAATTAGTCACCCGGACCGTGATCAGGACGGACGGCTCCGGCTCGCAGGGACCCGTCGTCTGCGAGGTCTGCGGACGAATCGTCAAGAACCCGGCGAAGCTGCAGTACCACCTGAACACCCACATGGCGATAAAGCCCTATGCCTGCCCCGAATGCCCCAAGACTTTCGCCACGAAAAGTGTCAGAGAGATCCACATGCGCGTGCACACTGGCGAGAAGCCCTACAAGTGCAAGCTGTGCTCGGTGGCGTTCTCCATGCAGTGCAACTACGCCAGGCACTACAAACATGTACATCTTGGTCAGCATAAAAACGTGCCCTGCGAGCTGTGCCACAAAAGGTTCACTACGGTGGCGGGCAAGAAGCTGCACGTGCGCTCCGTCCACAGCAACGTGCCGTGGCCGAAGCGCGTGAGGAAGGCGAAGAAAGCCGCAGACGTTGTGGAAAACCGATCGCCGTTAtcataa
- Protein Sequence
- MGSSPGGGVFDEHIYPHCGLPRCPTSRALWLLAIGRPLRTANSCTQVCSRHFAESMYVRRGRTKTLIQNAMPTLFLPPPVKICQRVKPTESGDVLACRVCLATDAPLYNLAGSGLEHKFTELTGTPLSAADGLPQRLCAWCRAQLSKYAAFRARCQRSHSLLKTVLARGPLKTTDILTVDRRLHKLTHNLTVSKMFSFQNLPVIEIAPLIKFENDNTPSEAPEDFTEIEYLEADAFDDAVKDVVMDVSERNIEIRQKVQRVELEHDYNHKYVETDAVMDIEMQSDANDVGTDTSEEAVQKGIKKKRAKDGEITSDDSDFITKDDTDYADNDSSEDDEIFEIKNRLQDRINSAAAYCLTKLNDTEYHKINKRRKIGDDFYPNFDYEYFQKTFNVTIRRLTPEEQKQEIEDRKKANKAKLCCEMCGKGYNFKETMENHILIHHSISKPHECEICQYRFRLKCQMLDHRDRHRLTFTCNSCSFITRDRDGARAHCLTHQGSTFKCPYCDRVYKRNNSYLSHLRIHHPEKNVACDECGETFVSERGVQVHKDRAHRPNAKPTTEFKCSECDVEFLSAAALNKHKDLTRAVSHAALPACAACGESCDSEVALAAHKAERHPPDQHHCNECNSTFASTASFNTHVKRKHLGQKLVTRTVIRTDGSGSQGPVVCEVCGRIVKNPAKLQYHLNTHMAIKPYACPECPKTFATKSVREIHMRVHTGEKPYKCKLCSVAFSMQCNYARHYKHVHLGQHKNVPCELCHKRFTTVAGKKLHVRSVHSNVPWPKRVRKAKKAADVVENRSPLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462928;
- 90% Identity
- -
- 80% Identity
- -