Basic Information

Insect: Ditula angustiorana
Gene Symbol: -
Assembly: GCA_963691745.1
Location: OY829500.1:2544965-2566753[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0065 0.41 11.9 1.2 1 23 221 243 221 243 0.99

2 10 0.0071 0.45 11.8 0.8 2 23 251 272 250 272 0.97

3 10 0.01 0.65 11.2 0.6 1 23 276 299 276 299 0.95

4 10 0.021 1.3 10.3 1.9 1 23 306 328 306 328 0.99

5 10 0.0013 0.082 14.1 1.5 2 23 335 356 334 356 0.96

6 10 1.8e-06 0.00011 23.1 1.7 1 23 362 384 362 384 0.98

7 10 0.00074 0.047 14.8 2.3 1 21 389 409 389 414 0.92

8 10 0.0032 0.2 12.8 0.4 1 23 422 445 422 445 0.94

9 10 0.055 3.5 9.0 1.9 1 23 451 474 451 474 0.95

10 10 8.7e-06 0.00055 20.9 2.5 2 23 481 502 480 502 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0065	0.41	11.9	1.2	1	23	221	243	221	243	0.99
2	10	0.0071	0.45	11.8	0.8	2	23	251	272	250	272	0.97
3	10	0.01	0.65	11.2	0.6	1	23	276	299	276	299	0.95
4	10	0.021	1.3	10.3	1.9	1	23	306	328	306	328	0.99
5	10	0.0013	0.082	14.1	1.5	2	23	335	356	334	356	0.96
6	10	1.8e-06	0.00011	23.1	1.7	1	23	362	384	362	384	0.98
7	10	0.00074	0.047	14.8	2.3	1	21	389	409	389	414	0.92
8	10	0.0032	0.2	12.8	0.4	1	23	422	445	422	445	0.94
9	10	0.055	3.5	9.0	1.9	1	23	451	474	451	474	0.95
10	10	8.7e-06	0.00055	20.9	2.5	2	23	481	502	480	502	0.97

Sequence Information

Coding Sequence: ATGGCTGAATTTTACATATCAAACGCCAAGTACACGTGCCGCGGGTGCTTAAAGATAAGTGAAGACTGTTCTACAATGACTGCGGAAGAAATATCAACGTATAAAAACTACGTCAAGgaCCACATTTTCCAATTGTCAAAACACAAAGTGTATCACAATTACATATCTACTCTACCAGTCGTCCAATATCTAGGCCCAGAAACAGAGTATGTCGTACCAATCTATGATTGTGATGAAATTAAACATTATGATGACACATACAAACATGATGATGAGGTAGAGCAACGTTGTGATGACATATATAAACATGATGATGAGGTAGAGCAACATTGTGATGAGGTAGACGGGTACTGTGATGACATAGACAAGCGTGATGATGACGACGTCCCACTTGTTATGTTGAAAGAGTGTAAAGAAGAGCGAGATATGAAAGTTAAAAAGAAGAGGGAAAAAAGGCTAAGTAAATCAAACAACCGAGTAACCGAAGACTCACCCAACGAACGAAAGAGTAGGAGCAAAGTGCAAAAACAACTAAAGGAAGGTTTCAGTTCCCGCATGGTGCAAGAAACGAATGAATATGAGGTCATCAAACTCACTAAGGAGCAGGTTTTAAAAGAAATGGAGGAGAAATGTAACAGCGAGAAATACCAGAGGTCAGTGTACAAATGCGAGAAGTGCGCTAAAGGGTTCAACTTTAAGGACGTCATAGACAATCACATGAAGAAGCATTCACAGGAACATGGCATTTTAAAATGTGAGATTTGCACGCAGTACTGCCCCAGCGCTATATCTCTACGGGGACATATGAAATCTCATACAACTAGATACAAATGCAAGATATGCGGCGCCATACGCATATCTCGGCAGCATCTGTTGGAGCATTACACTATTGAGCACACCTTCGACGCCTCCGTTTACACTTGCGAGCAATGCTCGTTTACCACCAAGAATCGCACAGTGATCCAGCGGCACGTGAGGTCCCACAAAGTGGGCAAGTCCCTAACGTGCAGTGTGTGCGGCGTGGGGTTCACCAACATGCATACGCTGCGGATGCATACATCCCGTCACGATCCTTCCCAGCGCTTCAGTTGCCCCCAGTGCAACATGAAGTTCATATACCCGTCTCTCTTGCACCGGCACATGCGTATTCACTCTCACCGCGACCACTACTGCGTGGAGTGTGACGTCACCTTCAAATCTAATGATAATTTAAAACTGCACTTTAAAAGGGCGAAGAAGCATCGCGACCCGTCTACTTAcaaGCATAAGTGTCAGTCGTGCTCGGAGCGCTTCCCGTCAACCTCGGCGCTCCTCGCGCACCAGTCGGCCGCGCACGGTGCTGCGCGTAGCCACGCGTGCGCGCGCTGCGGCAAGCTGTACTGCAGCCGGGACAGCGCGCGCGCGCATGAGCGCCGCGCGCACCGCGCCGCACAGTGCCTGCGCTGCGACGTCTGCCACAAGGACTTCAGCCGTAAATACGTACTGGCGAAACATCTCCGCACCCACACGGACGCGTCTCAGGGCTCCCAGGGATGCTGTGGCGTTTACGCCCAATCTCCGAAGCACAAgAAAGAAGAGGAATCAAACAACGAAACAAGCCAAACGGGGGCAGCCAAGTATCGGATGATTTCGATTCCGGAACTGAAATCGGATGTTGGACAGCCGGTTCCGGAGTTCCGGAACTGA
Protein Sequence: MAEFYISNAKYTCRGCLKISEDCSTMTAEEISTYKNYVKDHIFQLSKHKVYHNYISTLPVVQYLGPETEYVVPIYDCDEIKHYDDTYKHDDEVEQRCDDIYKHDDEVEQHCDEVDGYCDDIDKRDDDDVPLVMLKECKEERDMKVKKKREKRLSKSNNRVTEDSPNERKSRSKVQKQLKEGFSSRMVQETNEYEVIKLTKEQVLKEMEEKCNSEKYQRSVYKCEKCAKGFNFKDVIDNHMKKHSQEHGILKCEICTQYCPSAISLRGHMKSHTTRYKCKICGAIRISRQHLLEHYTIEHTFDASVYTCEQCSFTTKNRTVIQRHVRSHKVGKSLTCSVCGVGFTNMHTLRMHTSRHDPSQRFSCPQCNMKFIYPSLLHRHMRIHSHRDHYCVECDVTFKSNDNLKLHFKRAKKHRDPSTYKHKCQSCSERFPSTSALLAHQSAAHGAARSHACARCGKLYCSRDSARAHERRAHRAAQCLRCDVCHKDFSRKYVLAKHLRTHTDASQGSQGCCGVYAQSPKHKKEEESNNETSQTGAAKYRMISIPELKSDVGQPVPEFRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -