Dang025157.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829499.1:3882707-3885253[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.048 3 9.2 2.1 1 23 31 54 31 54 0.93 2 16 6.9e-05 0.0043 18.1 2.3 1 23 85 108 85 108 0.97 3 16 1.7 1.1e+02 4.3 1.4 1 23 123 146 123 146 0.93 4 16 0.41 26 6.2 0.6 1 23 176 199 176 199 0.91 5 16 0.04 2.5 9.4 0.6 1 23 238 261 238 261 0.91 6 16 9.8e-05 0.0061 17.6 2.1 1 23 295 318 295 318 0.97 7 16 0.18 11 7.3 0.9 1 23 333 356 333 356 0.85 8 16 0.35 22 6.5 3.3 1 20 441 460 441 464 0.87 9 16 1.2 77 4.7 2.9 1 10 551 560 551 574 0.81 10 16 1.3e-05 0.00079 20.4 1.7 1 23 600 623 600 623 0.98 11 16 1.6e-05 0.001 20.1 3.6 1 23 637 660 637 660 0.97 12 16 2.7e-05 0.0017 19.4 3.5 1 23 674 697 674 697 0.97 13 16 0.0028 0.17 13.1 5.0 1 23 707 729 707 729 0.97 14 16 0.0072 0.45 11.7 3.5 2 23 744 765 743 765 0.94 15 16 0.00091 0.057 14.6 5.5 1 23 780 802 780 803 0.96 16 16 3.6e-05 0.0022 19.0 4.0 1 23 814 836 814 836 0.96
Sequence Information
- Coding Sequence
- ATGCAGATACACAAAGCAGATAAACCAAATTGTGACAATGCATTCAACGAGAAGGTAACGCAATCATTCGGTCACACGAAGAAGAAACGTTACTCTTGTGACATATGTGATAAGCAATTTTTGTACAGACGACGATTGAACGCTCACCATATGCTAATGCACAAAGCAGAGAAATCAAATTGTGACAATACGCTCGACAAACACGTCACACAATTATCCAAGCACATGCAAGGTCACGCAAAAGGGAAGGTCTACTCTTGCAACTTTTGCCAGAAGAAATTTGTATACAGACAAAGTTTGCAAACTCATATCATGCGAGTCCACAAGCTTACAAAACACTTGGAAGGTGATGCAAAGGAGAAACGTTACCCTTGCAACAGTTGTGACGAGCAATTTTTGTACAGACGACGTCTAAACACTCACAAAATGCAAATGCACAAAGAAGATAAACCAGATTGTGACAATACATTTAGTGAGACATCCGATGTAACCAAGGATTTTCAGGGTGACGCAAAAGATAAACGTTACCCTTGCAACATTTGTGAACAGCAATTTTTAGACAGACGACGTCTGAACACTCACAAAATACAAATGCACAAAGCAGATAAACCAAATTGtgacattaaatttaatgagTCATCCGATGTAACCAAGGACTTGCAAGGTGACGCAAAAGAGAAACAATCATTACGTCACACAAAAAAGAAACGCTACCCTTGTGACATTTGCGACAAGCAGTTTTTGTACAGACGACGTTTGAAAGCTCACAAAATACTAATGCACAAAGCAGATAAACCGAATTGTGACAATACAGTCGACCAACAGGTGATGCAATTTACCGAATTAATCAAGCATAAGCAAAATCACGCAATAGGGAAGATCTACTCTTGCAACTTTTGTCAGAAGAAATTTGTTTACAGACAAAGTTTGGAAACCCATATCATGCGACTGCACAAGCTTACAAAGCACTTGCAAAGTGATGCAAAGGAGAAACGTTACCCTTGCAACATTTGTGACAAGCAATTTTTGTACAGACGACGTTTGGACACTCACAAAATGCAAATACACAAAGTAGATAAACCAAATTGTGACAACACATTTAATGACTCATCCGATGTAACCAAAGACTTGAAAAGTGACGCAAAAGAGAAACATGACCCTCGTGGCATTTATGAGAAACAATTCTTGGACATACGACGTTTGAGTAGTCCGAAAGTACACAAAACAGATAAACCAAGTTGTGACGATACATTAAACGAGCAGGTAACACGATTATCTGATATAAGCAAGCATACACAAGGTCACGCAAAAGAGAAACGTTACTCTTGCGACATTTGTCACAAGAAGTTTTTGTACAGACGACGTTTGAAGACTCATAAAGTGGAAATGCACAAAGCAGATAAACCAGATTGTGACAATACAGTTAATAAGTTATCCGATGTAACCAAGGATTTGCAAGCTGACGCAAAAGAGAAACATGACCCTTGTGGCATTTATGAGAAGCAATTATTGTACATACGACGTATGAGCGGTCACAAAACGCAAATGCACAAAACCGACAAACCAAACGATGACGATGCATCAAACAAACAGATAACGCAATCATCTGATATAACCAACCACACACAAGGTCACGCAACAGAAAAACGGTACTCTTGCGACATTTGTCACAAGACATTTTTGTGCAGACGACGTTTGAAGACTCACAAAATACAAATTCACAAAGCATATAAACCAAATGGCGACAATACATCCAACAAACAGGTAACACAATCGAGTCACACAAAGAAGAAACGCTACTCTTGCGACGTTTGTCAGAAGCAATTTATTTACAGGCAAAGTTTGCAAACCCATATGCGAAAAGATCACCCAACTAGACACTTGCAAGGTGACGCAAAAGAGAAACTTCATTCTTGCAACATCTGTCAGAAGCAATTTGCTTACAATAAAAGTTTGCAAACCCATATGCGAAAGGACCACCCAACTAGCCACTTGCAAGGTGACGCAAAAGAGAAACTTCATTCTTGCAACATCTGTCAGAAGCAATTTGCTTACAAGAAAAGTTTGCAAACCCATATGCTTACTAGCCACTTGCAGGGCGACGCAAAAGAGAAACTTCATTCTTGCAACATCTGCCAGAAGCAATTTGCTTACAGAAAAAGTTTGCAATTTCATATGCGAAAGCACTACCCTACTAGCCTCCTGCAAGGTGACGCAAACGAGAAACTTTCTTGTCACGTCTGTCACAAGCAATTTGTTTACAGACAAAGTTTGGACTCTCATATGGTACAACACAAGCTTGCCAAGTCCTTGGAAGGTGACGGGATAGAGAAACTCTTTTCTTGCCAGTTCTGTCAGAAGCAATTTGCTTACAGAAAACCTTTGCGCACTCATATGCGAAAGCACCACCCTACTGAAGTCAACTCAATAGAGAAGATTCATTCTTGCAACATCTGTCAGAAGAAATTTGCTTacagaaaaaacttaaagtcTCATATGGAACAACACAATCCTGCCAATTCATTGGAAGGTGACGCGATGCCATAG
- Protein Sequence
- MQIHKADKPNCDNAFNEKVTQSFGHTKKKRYSCDICDKQFLYRRRLNAHHMLMHKAEKSNCDNTLDKHVTQLSKHMQGHAKGKVYSCNFCQKKFVYRQSLQTHIMRVHKLTKHLEGDAKEKRYPCNSCDEQFLYRRRLNTHKMQMHKEDKPDCDNTFSETSDVTKDFQGDAKDKRYPCNICEQQFLDRRRLNTHKIQMHKADKPNCDIKFNESSDVTKDLQGDAKEKQSLRHTKKKRYPCDICDKQFLYRRRLKAHKILMHKADKPNCDNTVDQQVMQFTELIKHKQNHAIGKIYSCNFCQKKFVYRQSLETHIMRLHKLTKHLQSDAKEKRYPCNICDKQFLYRRRLDTHKMQIHKVDKPNCDNTFNDSSDVTKDLKSDAKEKHDPRGIYEKQFLDIRRLSSPKVHKTDKPSCDDTLNEQVTRLSDISKHTQGHAKEKRYSCDICHKKFLYRRRLKTHKVEMHKADKPDCDNTVNKLSDVTKDLQADAKEKHDPCGIYEKQLLYIRRMSGHKTQMHKTDKPNDDDASNKQITQSSDITNHTQGHATEKRYSCDICHKTFLCRRRLKTHKIQIHKAYKPNGDNTSNKQVTQSSHTKKKRYSCDVCQKQFIYRQSLQTHMRKDHPTRHLQGDAKEKLHSCNICQKQFAYNKSLQTHMRKDHPTSHLQGDAKEKLHSCNICQKQFAYKKSLQTHMLTSHLQGDAKEKLHSCNICQKQFAYRKSLQFHMRKHYPTSLLQGDANEKLSCHVCHKQFVYRQSLDSHMVQHKLAKSLEGDGIEKLFSCQFCQKQFAYRKPLRTHMRKHHPTEVNSIEKIHSCNICQKKFAYRKNLKSHMEQHNPANSLEGDAMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462585;
- 90% Identity
- iTF_00462585;
- 80% Identity
- iTF_00462585;