Dang025937.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- ZNF595_1
- Assembly
- GCA_963691745.1
- Location
- OY829500.1:6351545-6364770[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.26 16 6.9 1.4 2 23 312 334 312 334 0.90 2 11 0.22 14 7.1 0.1 1 20 338 357 338 360 0.87 3 11 1.6e-05 0.00098 20.1 3.5 1 23 365 388 365 388 0.97 4 11 0.0086 0.54 11.5 0.2 3 23 398 419 397 419 0.94 5 11 1.3 84 4.6 0.0 2 20 428 446 427 448 0.92 6 11 0.00054 0.034 15.3 0.2 3 23 461 481 460 481 0.93 7 11 2e-06 0.00012 23.0 0.2 1 23 486 509 486 509 0.97 8 11 8.4e-06 0.00053 21.0 0.9 1 23 533 555 533 555 0.98 9 11 0.027 1.7 9.9 0.4 1 23 561 584 561 584 0.89 10 11 0.013 0.81 11.0 0.7 1 23 590 612 590 612 0.95 11 11 2.5e-06 0.00016 22.6 1.4 1 23 618 641 618 641 0.97
Sequence Information
- Coding Sequence
- ATGGCATCTGTTAAGTTAGAACTGGGGGCCGAGGAACTGCTAGCTTGTCGGATTTGTCTAGCTACAGACACGAAATTGTTTGGCATACACGAACACCGTTTAGACGAGATTTTCGTCGATGTCCTGGGAACGACGCTGTCCGTGTGGGACGGCTTCCCACAGCACGTCTGCAGCTTCTGCCGAGCCTTGCTGCTCAAGAGCTGCGAGCTGCGCCGGCGCTGCCGGACTGCCGAGGCGCTGCTCAAGCAGTCTCTACTGCACACACACTATATAACCACAGACTACATCCGAACCATAGATAGAATAACAAACAAGCTGTCCCTTCGACTTGCAGTCACCAACATCGATAGAGAGCCCAAAATTGACGCGAATGATACAATTGACACAAATGACAAAATTGACGTAGATGACAAATTTGACACAGAAGATAAACTCGACATTGACAGCGACAACGACTCGCAGCTAATATCAGTCCTATGCGAACCAGAAATATATGTCAGCGATGTCAAATTTGCAGAAGTGATCGCAACTGACATTGACATAAAATGTGAACCTATGACGTTACGGAAAAGAGTGAAATCTGATAGAAAAGTAAAGAATCACAAAGAAGTTAAAAGCAAAAAAGTAGAACGTAAAAGAAGGATAAAGAAGGAAGAAGAACAAGTTAAAGAGAGTAAGAAGTACACGCGAAAGAAGAAAGGCTTCAGATGGTTCTTTAGTACGGAAGAAGATTATGTGAAATTTGagaataaatacaatattagaGTAGTGAAGTTGAATGAGGAGGAGCAGAGGAGAGAGATGGAGTGCAGGAGGGAGACGGAGAACTACAGGCACGCGCACGTGCGCTGCGAGAAATGCTGTAAAGGATTCTTGTCTCTGATCACTTTCGAGAACCACAACAAGATTCACGATCCGAGTACGGGCGCCAACGAGTGCGCTCTGTGCTTCTCCCGCTATAAGTTCCCGACGCACCTGCGCCAGCACATGGTGGAGAGCCACTCGCACAAGTACATCTGCAAGGTCTGCGACCAGGTCATACGAAGGAGAAGCGCCGCCATGCTGCACTCTGCTTTCCACGCGGGCAGGACTTTCGAATGCAAATACTGCGGGAGAACATtcaaAAAATCATCGACGCGCTATACGCATATGCGTATTCAGCATCCGGGTGAGAATTCCTCGGGGGGCGCCTGCGACGTTTGCGGGGAGACCTTCACgggagccctagggctccagCAGCACAAGACGCGCAAACATAACAAGCCGGCGATCCCGGAGCTGAAATGCGTCAGTTGCGGCGTGCAGTTCGAGAGTTTGGACGCTGTGGCGAGACACACAGACAGAACGCCCGACAACGCTTGCGATCCCAACCTAAGAGCGTGCGCGCACTGCGGCGAGGTGTTCCCGAGCAAGGAGCAGCTGGCTGCGcatgcgcacgcgcacgcgcagAAGATGTACAAGTGCGACGATTGTGACCAACCGTTCGCGACTAAATCTTCGCTCAGCACGCACATCGACCGCGTCCACCTGAAGATAAAGCCGAGATACAAACTGATCTACAAGTacagcgcggcgcggcgcgcgcgcctcgaCGAGTACATGTGCGAAACCTGCGGGAAGGGATACACGAGTTTCGCAAATTTAAAGACTCATCAGTTGCGGCACACGGGCGAGCGGCCGTTCAAGTGTACGCAGTGCCCGAAAAGCTTCCTGACCGCTGCTCAGGCCAAGGGCCACAGGGAGCGCGTGCACGCGGGCGTCAAGAAGTACCAGTGTGCGCAGTGCCCCAAAACGTTCCTCGATAAGAGCTCCATCTATAAACACAAAGTGGTTCACACAGGAGAAAAACCATACGAGTGTCAGATCTGCCACAAAGCCTTTACGCAGTCCGGTTCGCTGTCGACGCACATCAAATATGTGCACATGAAGGTGAAGCCTCCGCCCCGGCGGCGCCGCAACCACAACGTTTAG
- Protein Sequence
- MASVKLELGAEELLACRICLATDTKLFGIHEHRLDEIFVDVLGTTLSVWDGFPQHVCSFCRALLLKSCELRRRCRTAEALLKQSLLHTHYITTDYIRTIDRITNKLSLRLAVTNIDREPKIDANDTIDTNDKIDVDDKFDTEDKLDIDSDNDSQLISVLCEPEIYVSDVKFAEVIATDIDIKCEPMTLRKRVKSDRKVKNHKEVKSKKVERKRRIKKEEEQVKESKKYTRKKKGFRWFFSTEEDYVKFENKYNIRVVKLNEEEQRREMECRRETENYRHAHVRCEKCCKGFLSLITFENHNKIHDPSTGANECALCFSRYKFPTHLRQHMVESHSHKYICKVCDQVIRRRSAAMLHSAFHAGRTFECKYCGRTFKKSSTRYTHMRIQHPGENSSGGACDVCGETFTGALGLQQHKTRKHNKPAIPELKCVSCGVQFESLDAVARHTDRTPDNACDPNLRACAHCGEVFPSKEQLAAHAHAHAQKMYKCDDCDQPFATKSSLSTHIDRVHLKIKPRYKLIYKYSAARRARLDEYMCETCGKGYTSFANLKTHQLRHTGERPFKCTQCPKSFLTAAQAKGHRERVHAGVKKYQCAQCPKTFLDKSSIYKHKVVHTGEKPYECQICHKAFTQSGSLSTHIKYVHMKVKPPPRRRRNHNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00342492; iTF_01135105;
- 90% Identity
- -
- 80% Identity
- -