Dang005255.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829472.1:19354920-19373368[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00084 0.053 14.7 2.0 1 23 201 223 201 223 0.98 2 28 0.00068 0.043 15.0 0.2 2 20 256 274 255 276 0.93 3 28 6.4e-05 0.004 18.2 0.4 3 23 311 332 309 332 0.96 4 28 8.6e-05 0.0054 17.8 0.4 1 23 383 406 383 406 0.95 5 28 6.9 4.3e+02 2.4 0.6 1 23 432 454 432 454 0.95 6 28 0.00013 0.0081 17.2 2.3 2 23 491 512 490 512 0.96 7 28 0.0013 0.081 14.1 3.8 2 23 548 570 548 570 0.97 8 28 0.0052 0.33 12.2 0.2 1 23 620 643 620 643 0.95 9 28 0.0025 0.16 13.2 0.2 1 23 699 721 699 721 0.97 10 28 0.016 1 10.6 5.6 2 23 733 754 732 754 0.96 11 28 0.051 3.2 9.1 1.8 2 23 766 787 765 787 0.96 12 28 0.0044 0.28 12.4 2.2 1 23 797 819 797 819 0.98 13 28 0.011 0.67 11.2 7.2 1 23 847 869 847 869 0.97 14 28 0.0024 0.15 13.2 2.6 1 23 880 902 880 902 0.98 15 28 0.00032 0.02 16.0 1.1 1 23 910 932 910 932 0.97 16 28 0.0037 0.23 12.6 0.1 2 23 952 974 951 974 0.97 17 28 0.047 3 9.2 1.3 1 23 992 1014 992 1014 0.93 18 28 1.3 81 4.7 7.0 1 23 1021 1043 1021 1043 0.98 19 28 0.0063 0.4 11.9 2.0 2 23 1054 1076 1053 1076 0.95 20 28 0.0014 0.085 14.0 0.6 1 23 1098 1120 1098 1120 0.97 21 28 0.0076 0.48 11.7 0.2 2 23 1201 1222 1200 1222 0.95 22 28 4.1 2.6e+02 3.1 5.5 5 23 1232 1250 1230 1250 0.94 23 28 0.017 1.1 10.6 0.7 2 23 1261 1283 1260 1283 0.95 24 28 0.23 15 7.0 2.2 2 23 1300 1318 1300 1318 0.89 25 28 0.15 9.3 7.6 1.8 2 21 1322 1341 1322 1342 0.94 26 28 1.5 95 4.4 2.6 2 23 1390 1411 1389 1411 0.93 27 28 0.079 5 8.5 0.4 2 23 1422 1444 1421 1444 0.95 28 28 2.4 1.5e+02 3.8 0.7 2 20 1482 1500 1481 1502 0.92
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTGGGAAAATGTAGACTTTGTCTCAAGCTCGGCGACTTCTATTCCATATTCACGGTGGACAACAACGTCCAGCTGGCTGACATGGTAATGGATTGCGCCCGCATTAAAGTATATGAAGGTGATGGACTGCCAGACAAGGTTTGCGCTGAGTGTATTCAAAAACTTAGCAGTGCCTATATTTTCAAACAACAATGTGAAAGAGCTGATCAAGAATTACGAAGAAACTATGTGCCACCACCAGGATTCAGCGCCAGCTCGCCGCCACCAAACAGGCAAAGCAGTGATTCCGCTTTATCCATCCACACTGACACTTCCAATCAAACTAAACCATCCTTCACCTCGGACTCTGATCCTACGAAAAGGAACAGTCGCAAGCGCAGCCACGAGAGTGCGGGAGACGTTTCTGTCAGCAGCCAATCGCACGATGTTCGACCCACAACCTCCAAACGAGTAGAGGAACTTAGAAACAGTCAGAAAAAGCCCAAACTGAAGTCAGGAAATTATTATGCCGATTCAGATTACGAAGATAATAGCGCTTCGCACTTCTCTGCTGAGACCGATTCTGACGAGCCGCTTCAGAAAGAACGGTTTAAGTGTAAAATTTGCACGAAGCAGTTTCAGTCACTGAAGAGCTTAGCATCGCATTCGAGAGTACATTCccgaaataaaactaaagatatTTTACCTGAAAATATGGTAGTTAGTATTCCAAAGAGTAATATACAAGATGCTTCAGACGCAGACGACCAACTCAGCTGCGAAAAATGCGGCAAATCTTTTAAGTTGAAGATAATGCTAAATCGACATGTTGATTCGTGTGGCAAATCACCTCAAAAGTCGCCCTCAAAACCATTCGAGAAGGAGTTACTCATATCTTTAGAACCGATCGACggaattcataataataaaaaaattgactgTCAAATTTGTACAACAAAATTCAAAACTATCGAGAATTTGGAAAAACATATGAAAGTGGTCCATGCAGCTGTGCTCCAAAAAGTCAAGTCGGAGACAAAACCGGATAGCGGCAAAGTGTCAGTACCTTGTATTTACTGTAAGAAACCATTCGATGATTATTATGTTCATAGTGAGCATTTTAGCAACTGTTCCCAAAATACGAACGCTCCCACATTCGAATGCCCGGTCTGTAAAAAAGTCACGACTAGAAAGGCTGCATACTTCCGTCACATCAAAGACGTGCACTTCGAGCCTCGCATGTGGGCGCTGAAGCCGGAggcggaggcggcggcggcggcggccgcggcgcgggAAGCCTTCTTCGAGTGCCGCATGTGCTGCAAGCGCTTGGCCTCCGAGCAGCTGCTCATCACGCACCTCGCCGCACACGTGTCTAACATCGACGGTGCTGACGAGGTCCACGACGAAGAGTCTAGACCGAGTACTATCGAAGATTCCTCATCGATACTCTCCGATAACAGCGGCAACGGTCCTCTGCAGTGTAATTACTGCGATAAAAGATTTAAGTATCGAAAATCTTTAGTGACACATGAGTTGAAACATTCCCAAGTGGAAGTGAAAGCGGAACCGCTGGCCACGCCGTCGACCAGCGTCGCGGAGGCCCCGTACCGCGAGGAGTCGGCCTCCAGCGAGGACGGCGACGACAACACGTGCGACATCTGCGAGAAGCAGTTCTCCTACAAGCGCCTGCTCGTGCACCACAAGCGCACTAAGCACAACATGAGCTCCGGCACTAAACGAGCCAACATCAACCTAAAAGACTGTCTCGTCCGATGTTTAATATGCGATATCGACATGAAAGTGAGTGAGGTGAATGAGCATAATCAGAAACATATTCAAGCAAATATGAAACCGCGCAATCTGTATACGTGTATTGATTGTGGTGAGAAATTTAAAAGTCGTACGGTACTGGCCAACCATATCAAACTAGTACACAGACTCAAGCAGTTGCCCCCGAAACAATTTGAAGGTGCCGATTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCCCTGGATGTGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGACGAGCAAGAGTACTCTCCGTCTATAAATCTGAGCGGCTTCACTTGCACCATATGCGGAAAGAACATGCCCACTCTTATTTCACTTAAACGACATGTCAACTGGCACTCAAATGTTGGAAACCAATTGGAAAAAAAGATCGAGTGCTTTGTTTGTAAAGagacattTCGGTTTCAATGTCACTACAAGTTGCACATGCGCGAGCATTATCGTGACACCAATCTCGACCCCAAACTTCTCACCTGTACCATCTGCAATCGAAAAAGTAAACACTTGAGGGCAGCTCAGGCTCATATGAATTACCACAAACAGACTCGCTTTCAGAATAAAGACTACCAGTGTTCCATATGCAAACGGGTATTCCAACATCGGAAAGTTTACCTGTCGCACATGGCGATACACTACAAGCGTGGCGAAAGCCAGAACACTATTGTAGGGGACGCACTACCTAATACCGTCGATAAAACAGTTTTTGATGGTAAGCATACTTGCCTTCATTGCGGAAAGGTTTGTGACTCTGAGAATTCTTTAAAGCATCATATGTCTTGGCACAATTCAAAAACTTTGCTGTTTGGTGCGCGACACGAGTGCCCGATTTGTAATGTCacatttactaacaaaaaaagACAAGAATTGCATACAAGAACTCATTACGAAGACGAAAATGGTCCTTTTAAGTGTACAATATGCGGCAAAGGATATAACGACGAGAACTTTTTCCGAAGGCACGTCAAAGGGCACAACTTCGATCATCAGTCTCATAAGAAAAGAATAGAGAAGCTGAGGAAGGACAAAGTAAAATGTCCAATTTGCGTCCGTTACTACCCGGACCTGGTGAAGCTGATCCGGCACCTGCGGCGCACGCACCCCGAGAGCAAGATGATCAAGCAGGACCCCGATGCGCCTGCACCGCGCGTGTTCGCGTGCAAGCTGTGCGCGCGCACGTTCCGTGATGAACGCCGTCTGCAGCATCACGAGGAGGCGCACCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGCGGCAAGAAGACCATCTCGCTCAAGCACCACAACATGCACATCAAGAGCCACCTTGTCACCAAGCACACGGACGAGCCGCTCCGCTGCCCGCACTGCGACCAGCGCTTCGTCAAGGGCTACGACCTGCATTACCATTTGCGGGACGCGCACGACATCAACGAGACGTGGATTGCGGACCGTACCGAGCAGACGTTGAATGGCCCGCTAAAGGAGTTCCAATGCTCGATTTGTCTTAAAACACTTGCCAGTAAAGGAAACTATGAAAGACACTTGGACTACCACAATTCTTTAAGATGCAACTACTGCTTTGACTATTTTAGTTCCCTGAGGTTCCTGGAAGGCCATCTGACTTACAGTTGTGATAAAAAGAAGTTGGTCGGTGATACCGAAATATTTCCACGAAAGATCAAATGCCACGTTTGTTATAAAGCATTCCATTTGCAAGTTAAATTGGACTGCCATCTACGCACACAACATGACATAAAGGTTTCAAAGGAAGCGTCTAAGAGCAAGAAAGATCTCGTATGCGACTATTGCTTCCGAGTTttcgaaaatattgacgctttaaCAACGCATAAAATATATCACCGTACGGTTGGTTATTTCGGATGCATATACTGCAAGAGGAAATTCAACACTTTGACTCTTTatagaaaacataaaaaccatcATTTTGCTCAGCTAAATGTCGATAATCCGACTAAATGCGAACACTGCGACGAGTCTTTCGTCGCTTTCAGAGAAATGATTTATCATATGAGAGATGTGCACGGAGATGACAAAGAGTGGATTATAATGCCCAAGGAATCGATTGAGGAGACGTGTCCCATCTGCAACAAGGTGTTCTTCAACCTGCACAGGCATCTAGACTATCACGAGGAGAACCGGTGCAAGAAGTGTGGCGAGTACTTTTACTCCCGCACCGACTTCGACAACCACCTGTGCGCTATCGAGAGCGACGACGAGGTGGGCTGCGTCGATGCAGACACGCGGCCGAAGTACGAAGAATGCCGATTTTGCTTCAAGCCTATAACTAGAAAGAGTTCCAAGGCGAAACACGATCACATTCATAAAGGCTCGGGATCAATTTCTTGTCGATTCTGCTcgcataaatttaaaacaatggatGCATTTAATATACACGCTTTTTCTCATCGAAgtcgaaaatataagaaaaatcCACTGAAATGTCGTAAATGTGGAGATAAATTTATACAATATGGGCCATTCATTAAGCACATGAAGGAAGTGCATAAGTCTATTCAAAAAATGCACTATCGAGCGACTGTGAAGCCGGAGCGCTGCGTCGTCTGCGGAGACAACTTCCCCAACCTGCACAACCACTACCGCGCCCACCTGCAGAACCAGTGCCCGGCCTGCTTGAAGTACTTCACCTCCTCCAAACTGTTCGCTGAGCACGAGTGCGCCAAGGAGGACTCCGACCCGACCAAAGTGTTCACGTGTAAAGAGAACTTGATGGTACTCATCAACACTTACGTCCCGAAAGACGAAATAGACGAACAAAAGCATTACGGTCACAGCATCGAGGAAGAGGATGACGCGAATACATTGCGGGGGCTGGCTGACGAGGAAAGTCAAAACTCGAATGAGAATGAACACTTCCAACTTCAATGTCCCATTATATCCGATGTACTGTCGCTGTACCAGAAGCAGGAAGTTAACAGTGCCGATGACGCCGACGTCGCCGCCGATGTCGTCGTCGACGACGATGACGTCATTGCGCTGTCAGACGACGAGGTGGGTGTGCTGGATAACGACGGCTGCCCCACCATTACAATAGATGACGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNNVQLADMVMDCARIKVYEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSASSPPPNRQSSDSALSIHTDTSNQTKPSFTSDSDPTKRNSRKRSHESAGDVSVSSQSHDVRPTTSKRVEELRNSQKKPKLKSGNYYADSDYEDNSASHFSAETDSDEPLQKERFKCKICTKQFQSLKSLASHSRVHSRNKTKDILPENMVVSIPKSNIQDASDADDQLSCEKCGKSFKLKIMLNRHVDSCGKSPQKSPSKPFEKELLISLEPIDGIHNNKKIDCQICTTKFKTIENLEKHMKVVHAAVLQKVKSETKPDSGKVSVPCIYCKKPFDDYYVHSEHFSNCSQNTNAPTFECPVCKKVTTRKAAYFRHIKDVHFEPRMWALKPEAEAAAAAAAAREAFFECRMCCKRLASEQLLITHLAAHVSNIDGADEVHDEESRPSTIEDSSSILSDNSGNGPLQCNYCDKRFKYRKSLVTHELKHSQVEVKAEPLATPSTSVAEAPYREESASSEDGDDNTCDICEKQFSYKRLLVHHKRTKHNMSSGTKRANINLKDCLVRCLICDIDMKVSEVNEHNQKHIQANMKPRNLYTCIDCGEKFKSRTVLANHIKLVHRLKQLPPKQFEGADLADFCEVVVTKAEPLDVIQSHNGFGEVPDEQEYSPSINLSGFTCTICGKNMPTLISLKRHVNWHSNVGNQLEKKIECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRKSKHLRAAQAHMNYHKQTRFQNKDYQCSICKRVFQHRKVYLSHMAIHYKRGESQNTIVGDALPNTVDKTVFDGKHTCLHCGKVCDSENSLKHHMSWHNSKTLLFGARHECPICNVTFTNKKRQELHTRTHYEDENGPFKCTICGKGYNDENFFRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICVRYYPDLVKLIRHLRRTHPESKMIKQDPDAPAPRVFACKLCARTFRDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKHHNMHIKSHLVTKHTDEPLRCPHCDQRFVKGYDLHYHLRDAHDINETWIADRTEQTLNGPLKEFQCSICLKTLASKGNYERHLDYHNSLRCNYCFDYFSSLRFLEGHLTYSCDKKKLVGDTEIFPRKIKCHVCYKAFHLQVKLDCHLRTQHDIKVSKEASKSKKDLVCDYCFRVFENIDALTTHKIYHRTVGYFGCIYCKRKFNTLTLYRKHKNHHFAQLNVDNPTKCEHCDESFVAFREMIYHMRDVHGDDKEWIIMPKESIEETCPICNKVFFNLHRHLDYHEENRCKKCGEYFYSRTDFDNHLCAIESDDEVGCVDADTRPKYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCSHKFKTMDAFNIHAFSHRSRKYKKNPLKCRKCGDKFIQYGPFIKHMKEVHKSIQKMHYRATVKPERCVVCGDNFPNLHNHYRAHLQNQCPACLKYFTSSKLFAEHECAKEDSDPTKVFTCKENLMVLINTYVPKDEIDEQKHYGHSIEEEDDANTLRGLADEESQNSNENEHFQLQCPIISDVLSLYQKQEVNSADDADVAADVVVDDDDVIALSDDEVGVLDNDGCPTITIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01136024;
- 90% Identity
- -
- 80% Identity
- -