Dang025031.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829499.1:2365753-2370095[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 6.9 4.4e+02 2.4 0.1 3 23 76 97 76 97 0.90 2 27 0.1 6.3 8.1 0.9 3 20 122 139 120 142 0.89 3 27 0.045 2.9 9.2 4.2 2 21 147 166 146 169 0.94 4 27 0.17 11 7.4 0.1 1 22 173 194 173 194 0.95 5 27 0.76 48 5.4 0.8 3 23 202 224 201 224 0.86 6 27 0.00025 0.016 16.3 2.6 1 23 231 254 231 254 0.96 7 27 1.9 1.2e+02 4.1 0.1 3 23 317 338 316 338 0.91 8 27 0.049 3.1 9.1 0.2 2 23 363 385 362 385 0.96 9 27 0.00048 0.03 15.4 2.0 2 23 409 430 408 430 0.96 10 27 0.0021 0.13 13.4 1.4 1 21 434 454 434 455 0.96 11 27 0.11 6.8 8.0 0.4 1 23 496 518 496 519 0.94 12 27 0.75 47 5.4 0.7 2 23 545 567 544 567 0.94 13 27 0.016 0.99 10.7 0.5 2 23 590 611 589 611 0.94 14 27 0.00051 0.032 15.4 0.0 1 23 615 638 615 638 0.97 15 27 0.097 6.1 8.2 2.1 1 23 642 665 642 665 0.97 16 27 0.64 40 5.6 0.8 1 23 670 695 670 695 0.94 17 27 0.11 6.6 8.1 0.3 2 23 752 774 751 774 0.96 18 27 0.0011 0.072 14.3 0.4 2 23 844 865 843 865 0.96 19 27 0.053 3.3 9.0 0.4 1 21 869 889 869 890 0.94 20 27 3.1 2e+02 3.4 0.1 1 23 931 954 931 954 0.92 21 27 0.39 25 6.3 0.2 2 23 980 1002 979 1002 0.95 22 27 0.042 2.7 9.3 1.6 2 23 1026 1047 1025 1047 0.94 23 27 9.9e-05 0.0062 17.6 0.0 1 23 1051 1074 1051 1074 0.97 24 27 0.015 0.95 10.7 0.5 1 23 1078 1101 1078 1101 0.98 25 27 7.7 4.8e+02 2.2 1.3 1 23 1106 1131 1106 1131 0.91 26 27 0.16 10 7.5 5.7 1 22 1140 1161 1140 1163 0.88 27 27 0.0069 0.44 11.8 0.2 1 23 1173 1196 1173 1196 0.96
Sequence Information
- Coding Sequence
- ATGGTGAAACGGAATGCCGAGGTAATCTTGCAATACTCGACTGTGTATCCGTTCAGGCTGCGCTCTAAGTCGATGTTTTGCGTGTACTGCGACGATGAGTACGAGGATCCAGCGGAGTTCCGCACGCATGCGGTCGCGTGCCAACGCTCCTTCCCCTTCGCTAAAGCCTTTGCATACAGCCTCCGCAACCAAGAACACCTCAAAGTTGAGTGCTCCAGCATGGGATGCCGCGTTTGCAATATCCCTTACGGCACACTCGAAGATATGGCTCAGCACATTTTCGACAATCACGATAATACGACTCTAAATCTAACTTACGATTTGGGCTTGCAGCCCTATAAACTAGACCAAGAAAAATGGTTTTGCTTTATATGCCAGAAGAAGTTTCCATCTCTTACCAAACTTGGCAGACATACGCCAACTCATTATAGAAAATGTACTTGTGAGATTTGTGGACGAACGTATCTGACTAAAGAAGCCTTGAAGTACCACATGCGATGCAACCACTCTGATAATTACGCCTGTCGGAAATGCTGGCAAGAATTCCCTTCCTTAGACGAAAAGAAGGAACATATAAGGTCATCGAAACCTTGCTGGCCCTTCTGCTGTATATATTGCGGAGAAAGATTTCTGTCTTGGGAGAACAAGCAGAAACACCTAGTCGTGGCACATGATCGCCCCAAAAAGACATATAAGTGTCCAGACTGCGATAAAACTTACGATTCAAGAAAGTTATTTTATAGCCATTATAAATTAACTCATACAGATGAGACTTTCACTTGTTCCTGTTGCGggTACACATTGGAAATTCACGGGCGTAGTGACAGTGAGAGGGAACCAAAACCGAAAATAGTTCTCGTTTACCAGACACCACAGCGGCGTAACGCCGAGCTTATACTAAGATTCTCAACCGCCTACCCTTTTAAAACGAGGTTTACGCAAATACTTTGCGCATATTGCCTCGACGAATTCGATCCCCTCTCCAGCCTACGCTATCATATGCAATCTGAGCATCGTAATTcggattttaaaaatgtattctaTAGAACGAacgataatttaattaaagtggACATAACTAACCTTAAATGTAAAATCTGTGATCTAACCATGAACGATATCGACACTCTGATGACACATTTGTCCACGGCACATGAAAAACCGGTCAAATTTAACGCTCGTTTCGGAGTATTGCCGTATAAGGAGAACCCTAACGGCGAATGGCCGTGCGTGTATTGTCACAAAACTTATTCTTCATTTACTCAGTTCAATCGTCATATTGGTACACATTTTATGAATTTCAGTTGTGAAAAGTGCGGTACGACATTTATATCAGATCACGCTTTACGCGATCATCATCGGCAGGTAAAGTGTTGCCGGACAGCGTACAAAGCTAGGAATGGTAGGGTCATGCGGTCCCGGCGGAATGCAGAATTGATTCTCCAGTGGTCTACCGCCTGTCCCTTTAGAACTTGGAAGAATAATTTCAGCTGCGTATTCTGCCGCGTACAAACAAGCGATCCGAGTGGACTTAGAAGCCACGTGGCCATACATCATGCCGACTACCACGTTCAAGACGCGTTTTACAGAAAATTAGGGAAGGAGTTCCTTAAAATCGATATCACTGATCTACATTGCAAACTCTGCTTTATGCCTATCGAATCATTAGATGATCTAACAAACCATTTAAAGAATGATCATCAACAGCCTATAACTGACGAACAGTTAGGTGTTATCCCGTTCCAATTGAATGACGGATCTATATGGAAGTGTACTATATGTCCGAATCGGTTCCAGGACTTCGTGTCGCTGAAGAAACATACGGCCGAGCATTTGCAAAATTACGTATGCGATACATGTGGAGAAGGGTTCATTACCGAATCTGCTATGATCGCTCACACTAAGATACCGCATGAAAATAAGTACAACTGTAGCCGATGTGTGGCCACATTTTCGTCTCTAGACGAGAGAAACCACCATGTAAAAACTCAGCATACAAATACACCTTATATGTGCAATTATTGTAAAGATAAACCCCGTTTCTCCAATTGGGAACTCCGCAAGAAACACTTGATGGAGGTTCACAACTATACCTCTGggCCAACGGAAAAAGCGGAACGTACTGAGACCGAACGTAAAACGAAAAAGAGACTATTCGAAAGATCGGTTAACCAGAACCCGCAGCGTCAAAACGCTGTAATGATACTAAAATACTCTACCGCGTTCCCTTTTAAAACACGATTTAATAGGATTGTCTGTTCTTACTGCCATGACGAGTTTGAGCCTATGACGGCATTGAGGAGTCACATCAAAACCGTCCATGCGAATGCTGATTACAACAGCGCATTCTACAAGGTAGTAGACGACTTGAAAATAGATATAACTGAATTCAAATGTAACCTATGCTCACAAGACATTCAAAGCGTAGAAGTATTTATGAATCATTTGTCACGTGATCACGGTAAAACGGTTAACTTTGAAGTGCCGTTTGGAGTTTTACCTTACAGACAGGGCCCCACTGGGCTATGGATGTGCCTGGATTGTGATAAAACTTTCTCAGAATTCTCTCAAATCAATGGTCATTTGCGAAGtcatgttaaaatatttacttgcGAGAAGTGTGGAGCAACTTTCTTATCCGAACACGGTTTGAGACAGCACGAGCGCAACTTCAAATGCTACAAGGCAACCTATAAACCGCGCTTCGGGAAGGCACTAAAGCATCGTAGCAATACAGAGATCATTCTACAATGTTCTACAGCCCGACCGTTCAGGACATGGGGCCAGAATTTCAATTGCGTTTTCTGTCGTGTGCAGTCCAACGATCCAAACGGTCTGAGAATGCATATGGCAGCAAGGCACGCTAACTTCAACATACAGCACGTTTTCAGTCGGAAATTGAGAAAAGAATTTCTCAAAGTAGATATCACTGATCTTCAGTGTAAACTCTGTTACTTACGCATTGATTCTCTTGACGATCTAATTACGCATCTCAAAAATGATCACAAACAACCTATAAATGCAGACGTACAACCCGGGGTGCTGCCTTTCAAACTGAATGATGGATCTCACTGGAAATGCGCTATCTGCACGTGTCAATTCTCAGATTTTATCTCTCTAAAAAAGCATACTGCTGAACACTTTCAGAACTTCGTCTGTGACACTTGCGGCGAGGGTTTCATCACAGAATCCGCTTTGATAGCGCACACCAAAATACCACACGATAACAAATATAGTTGCAGTCGATGCGTCGCAACATTCTCCACTCTAGAAGAAAGAAACATCCACATAAAAACTCAGCATACAACGCTACCTTACATGTGTGCGCACTGTAAAGATAAACCCCGCTTTGCGACATGGGAATTGAGGAAACGTCATCTCATGGAGTTCCACAATTACAAACCTGGCGCTGAAATGTACGAGTGCACTACTTGCCACATGACTTTCAAGACTAGGTCTCAAAAATATCACCACAACGTTAAAGCCCATAGGACTAAGAAGGAGACAGAGTATGGGTATCCATGTGGTAGTTGTTCGAGAGCTTTTGCTACTAAATTGTCACTGGATAAGCACATTGCTAAAAAGCATTTCCACGTGTGA
- Protein Sequence
- MVKRNAEVILQYSTVYPFRLRSKSMFCVYCDDEYEDPAEFRTHAVACQRSFPFAKAFAYSLRNQEHLKVECSSMGCRVCNIPYGTLEDMAQHIFDNHDNTTLNLTYDLGLQPYKLDQEKWFCFICQKKFPSLTKLGRHTPTHYRKCTCEICGRTYLTKEALKYHMRCNHSDNYACRKCWQEFPSLDEKKEHIRSSKPCWPFCCIYCGERFLSWENKQKHLVVAHDRPKKTYKCPDCDKTYDSRKLFYSHYKLTHTDETFTCSCCGYTLEIHGRSDSEREPKPKIVLVYQTPQRRNAELILRFSTAYPFKTRFTQILCAYCLDEFDPLSSLRYHMQSEHRNSDFKNVFYRTNDNLIKVDITNLKCKICDLTMNDIDTLMTHLSTAHEKPVKFNARFGVLPYKENPNGEWPCVYCHKTYSSFTQFNRHIGTHFMNFSCEKCGTTFISDHALRDHHRQVKCCRTAYKARNGRVMRSRRNAELILQWSTACPFRTWKNNFSCVFCRVQTSDPSGLRSHVAIHHADYHVQDAFYRKLGKEFLKIDITDLHCKLCFMPIESLDDLTNHLKNDHQQPITDEQLGVIPFQLNDGSIWKCTICPNRFQDFVSLKKHTAEHLQNYVCDTCGEGFITESAMIAHTKIPHENKYNCSRCVATFSSLDERNHHVKTQHTNTPYMCNYCKDKPRFSNWELRKKHLMEVHNYTSGPTEKAERTETERKTKKRLFERSVNQNPQRQNAVMILKYSTAFPFKTRFNRIVCSYCHDEFEPMTALRSHIKTVHANADYNSAFYKVVDDLKIDITEFKCNLCSQDIQSVEVFMNHLSRDHGKTVNFEVPFGVLPYRQGPTGLWMCLDCDKTFSEFSQINGHLRSHVKIFTCEKCGATFLSEHGLRQHERNFKCYKATYKPRFGKALKHRSNTEIILQCSTARPFRTWGQNFNCVFCRVQSNDPNGLRMHMAARHANFNIQHVFSRKLRKEFLKVDITDLQCKLCYLRIDSLDDLITHLKNDHKQPINADVQPGVLPFKLNDGSHWKCAICTCQFSDFISLKKHTAEHFQNFVCDTCGEGFITESALIAHTKIPHDNKYSCSRCVATFSTLEERNIHIKTQHTTLPYMCAHCKDKPRFATWELRKRHLMEFHNYKPGAEMYECTTCHMTFKTRSQKYHHNVKAHRTKKETEYGYPCGSCSRAFATKLSLDKHIAKKHFHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -