Dang025336.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829499.1:5278371-5285626[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.065 4.1 8.7 0.2 1 23 54 77 54 77 0.94 2 25 0.6 38 5.7 4.1 2 23 104 126 103 127 0.95 3 25 0.00056 0.035 15.2 0.1 1 23 174 196 174 196 0.97 4 25 0.57 36 5.8 2.7 1 17 201 217 201 224 0.83 5 25 3.3 2.1e+02 3.4 2.7 2 23 232 254 231 254 0.80 6 25 0.0055 0.34 12.1 0.5 2 23 262 284 262 284 0.96 7 25 0.00016 0.01 17.0 1.7 1 23 290 312 290 312 0.98 8 25 0.013 0.83 10.9 0.8 1 23 532 555 532 555 0.94 9 25 0.21 13 7.2 1.4 2 23 628 649 627 649 0.95 10 25 0.0034 0.21 12.8 0.2 1 23 653 675 653 675 0.97 11 25 1.6e-05 0.001 20.1 2.0 1 23 680 703 680 703 0.97 12 25 0.32 20 6.5 0.5 2 23 711 733 710 733 0.93 13 25 0.0086 0.54 11.5 2.9 2 23 741 763 740 763 0.96 14 25 0.0041 0.26 12.5 0.1 1 23 769 791 769 791 0.97 15 25 4.4e-07 2.8e-05 25.0 0.9 1 23 797 819 797 819 0.99 16 25 0.00054 0.034 15.3 1.9 1 21 825 845 825 846 0.95 17 25 3.3 2e+02 3.4 1.8 1 23 927 950 927 950 0.93 18 25 6.3 4e+02 2.5 0.3 3 23 1023 1043 1021 1043 0.89 19 25 0.0059 0.37 12.0 1.2 1 23 1047 1069 1047 1069 0.98 20 25 0.58 36 5.7 0.4 1 23 1074 1097 1074 1097 0.90 21 25 0.01 0.65 11.2 0.6 3 23 1105 1126 1104 1126 0.96 22 25 0.0079 0.5 11.6 0.3 2 23 1134 1156 1134 1156 0.97 23 25 0.0024 0.15 13.2 3.9 1 23 1162 1184 1162 1184 0.94 24 25 5.7e-05 0.0036 18.3 1.0 1 23 1190 1212 1190 1212 0.97 25 25 8.5e-06 0.00054 21.0 4.4 1 23 1218 1241 1218 1241 0.97
Sequence Information
- Coding Sequence
- ATGGACGAAAAAATATTACCAAAAGTTGTATCCATGCCCCTAAAGACGAATTCAGAGGGGATAAAGATGTCTTTAGAAATGGCTAAACTCttggaaaattttgaaattgttatGCGTTCGTCCAACGCGACGCCGATGCGCGGCCGCCACGGACTTGGCTACACCTGTTACTTCTGCGACGTGCAGTTTCCAATCCCGGCTGATCTCAAGTCACACACTTTGGAGTCCCACGGGGACTTCCGCCACATCTCGGCAACAAGACTGCCGACACTCAGCAATTATTCTGTTAAAATCGACATCACGTCGTTAACTTgcaagttttgttttaaactataccATCAATTGTCGGCTCTCATGGATCACTTGCGTCTAACACACCATCAACCGATCAATACAGATGTGAAGAACTATATGCTACCTTTTAGATTTGACAGTGATCCTCTCAAATGTGTCTTATGTGAGACTGAATTTCACGCTTTCAGACCGGCCGTTGAACACATGAATGTGCATTTCAGGAATTTTATTTGCGATGTCTGTGGTGCTGGCTTTGTAAACAGAGCAAGCTGGCGAACTCACAGGCGCAACCATGACTTTGGAGACTTTCCTTGTCCGAAATGCCCGCAAGTCTTTAGTTCCATTGTGAAGTTGAGATGTcacgatcgctaccaccatcaggGCTTGGACAAAAGAAACAAATGCGGGTATTGCGGCGAAAAATTTAGCTGTTTggtctttaaaaacaaacatatgGTGAAAGAGCACGGAGTGGCGCCAACGGTAGCCCAGTGCAAAGCGTGCgacaaaatattcaacagctatCCGAGCCTTCGCGTGCATGAGAAAAGCTACCATTTGCTGGAAAAGAAGCACAAGTGCAAGCAGTGCGAAATGGCGTTTCGTGACAGAAAGGGGCTAGAGGACCATATGATTAAACATACACGGACGACCAATGTAGCACAAGATGTGCAAAAATCTACCACTGGGAGTATTATCCAATCGGGAGATGAAATTGAGAAAGAGATATCAGATGTGGAATATTTTGAGGACGAAGCAGATGTATCACCTCACCGTAAATATATTGATAAAAACCAAGCGCATTTACCTGCAACTGTTGAATATATTGATGATCCTGAAGAGTTATCATCTTTAGAGGCAGAGAGTACACGTCAGTCTGAAACGCCTCCAGCTTCACCTTCCGATTCTGAATATATTGCCAAATTAGATGCGGTTTCGCCTTCAACGGTTGATTATAGTGATAAATCTGAACCAGCTTCACCTTTAAACTTTGACTATTTGAGAGATTCAGAGGAGATCTCTTCAAATATTGAATACCTGGACGAAACTGAAGAAGAATTCCGTTTGACAGAAAGTATACAAAGGTCAAAAGAGGAAGTTACACGCCGGAAAGAAACCCTTAAACAAAGAAGAGAGGAAAATACCAAAACGCTTAATAAAGGTTTGAAATTGCGTAACAGAAGAAAGAAAACTGCCGTAAAACGACCATTTGAAAGAGAAACAAAATTTCACCATGAGAATTTGCGTACCATTCTGCGATGTTCTAACGCTACTACGTTTTCGAACCGCGGGATCTGGTACTTATGCAGTTTCTGCACCGCCAAATACACAGACGCCAAAGATTTAAAAGCACATACTTTAAAAACCCACGGCGATGCAAAATCCCAATCAAAGTTGTATTCGGTTCGCCAATTAAAACGCTTCGTCGTGAGGCTTGATATAACTGGCTTGAGATGCAAACTATGTTCCGTTGAAATCGGAAGTTTGAAAGACTTCATAGAACATTTAGATTTTGAACACTGTGAGCCCGTACACAAGGACCTCCCAAATCATCTGATCCCTTTCAAGTTTGAAACTGACGTGTTGCGCTGCGCCGAATGCGGCAAAGAATATGCATTCTTCAAAATGCTGCAGTGCCATATGAATGAACACTACAAGAATTTTTTTTGCGAAGTATGCAACGCCGGGTACATTACATTCGGAAGCCTCAGTCAGCACATTCGCATGCACGCGGACGGTGAATACACAtgtaaaaaatgtcaaaaaatgttcGACAACAAATATAAATTGGCGGACCATATGAAGTTAGTGCATTATGGCCagaaattgagaaataaatgcGCTTACTGCGACATGAAGTTCCAAGTGTTTGAAGACCGGAACAAGCATATGGAGGAAGAGCACGGTTTGAAAGCGCCCGTCGTGCAGTGCCAGGCGTGCGAGAAAATCTTCAGGTCCACCCGGCATCTGACTGCGCATAAGAAGAAATACCATATAGGAGAGAAGCGGTACGCATGCGCGCTATGCGACAAAAGATTTTACGCAGGGTATATGCTAAAAGCGCATATGGCCGTACACTCGACGGAGAAGGACTTCAAGTGTGTCGTGTGTGATAAAGCGTTCTCCAGAAAGAAGACTCTTCGAGAACATATTAGGATTCATGCTAACGATAGAAGGTTCAAGTGTGAGCACTGCGGGATGGCCTTTGTACAGAAATGCAGTCTGACCGGACATCTTAAGAGTGTACTGACGACAAATGTCGTCAAAATCGAATGGCATCCCAGCAAAGCAGACAAGACATCCGAAGAGACAACTACAGACAAAAATGATACAGATGGTCAAAAATCGCCTAAGAAAGATGgcaaaaaagataaagaacaaAAGTCTAAGGGTCCTACTGACCTAGAAATGCACCGTAATAATATAAGAGTGATACTAGAATGCTCGAATGCGACCCCTATACGATGTCACGGCGGCATCGGTTATCAGTGCTGCTTCTGTCCTGAGCAGCATCCGAACCCTGCCGATCTCAAAACCCACACGATAGAGAAGCACGATAACAAAACAAAGCATGCTTTCATGAAAGGAAAAACGATGTCCGAGTACTTCGTCAAGTTAGATATCACTAACCTGCGGTGTAAATTGTGTGACGCCGAAATGGAATCCATAGAGCCACTGATGACTCATCTAACAGAAAGACACGGGAAAAAGCTATACATGGATATCAAGAGTCACATCCTACCTTTCAAGTTTAACGACGAAACATTGCGGTGTATTTTTTGCCCCAACGATTTTAACACGTTTAAGGTTTTACAAGGTCACATGAACGTCCACTTCAGGAATTTTATCTGCGAAACTTGCGACAGCGGTTTTGTCACCCGCAACATGCGTAGGAACCATATGAAGACCCACGAGACTGGCTCGTTTATATGCAGTTTCTGTCCCAAAGTTTATGACACGCTGCTAAAACAAAGAGCTCATGAAAAACAGGTCCACAGGCATCCGAAAATGAACCTATGCCCTTACTGTAACGAAAGATTCAGGGATTTCACTCAGAAGGTTCGGCATCTGAAAGAAGCGCACGGTGTTCAGAAGGAATCACCGAAGTGTAAGGCTTGCGAGAGGAGTTTCGAGACGATGGCAGCGCTGAGCGTTCACATAAAAAGGGATCACTTAATACAGAGGCCGCATAAGTGTTCGCACTGTGACATGTCTTTTTATGTCAAGGCTCAACTCAGAAATCATTTTGTCATACACTCCGGTACGAGAGAGTTCGCGTGCACGGTATGTTTGAAAACCTTCGGCCGAAAGAAAACCTTGTCGGACCATATGAGGATCCACACCGACGATCGCCGGCACAAATGCAAGCACTGTGGAATGGCGTTTGTGCAAAAAAGTAGCTTGAGGAGCCACGTGCGGTCCAATCATTCCGACTTACATCAAGAATAG
- Protein Sequence
- MDEKILPKVVSMPLKTNSEGIKMSLEMAKLLENFEIVMRSSNATPMRGRHGLGYTCYFCDVQFPIPADLKSHTLESHGDFRHISATRLPTLSNYSVKIDITSLTCKFCFKLYHQLSALMDHLRLTHHQPINTDVKNYMLPFRFDSDPLKCVLCETEFHAFRPAVEHMNVHFRNFICDVCGAGFVNRASWRTHRRNHDFGDFPCPKCPQVFSSIVKLRCHDRYHHQGLDKRNKCGYCGEKFSCLVFKNKHMVKEHGVAPTVAQCKACDKIFNSYPSLRVHEKSYHLLEKKHKCKQCEMAFRDRKGLEDHMIKHTRTTNVAQDVQKSTTGSIIQSGDEIEKEISDVEYFEDEADVSPHRKYIDKNQAHLPATVEYIDDPEELSSLEAESTRQSETPPASPSDSEYIAKLDAVSPSTVDYSDKSEPASPLNFDYLRDSEEISSNIEYLDETEEEFRLTESIQRSKEEVTRRKETLKQRREENTKTLNKGLKLRNRRKKTAVKRPFERETKFHHENLRTILRCSNATTFSNRGIWYLCSFCTAKYTDAKDLKAHTLKTHGDAKSQSKLYSVRQLKRFVVRLDITGLRCKLCSVEIGSLKDFIEHLDFEHCEPVHKDLPNHLIPFKFETDVLRCAECGKEYAFFKMLQCHMNEHYKNFFCEVCNAGYITFGSLSQHIRMHADGEYTCKKCQKMFDNKYKLADHMKLVHYGQKLRNKCAYCDMKFQVFEDRNKHMEEEHGLKAPVVQCQACEKIFRSTRHLTAHKKKYHIGEKRYACALCDKRFYAGYMLKAHMAVHSTEKDFKCVVCDKAFSRKKTLREHIRIHANDRRFKCEHCGMAFVQKCSLTGHLKSVLTTNVVKIEWHPSKADKTSEETTTDKNDTDGQKSPKKDGKKDKEQKSKGPTDLEMHRNNIRVILECSNATPIRCHGGIGYQCCFCPEQHPNPADLKTHTIEKHDNKTKHAFMKGKTMSEYFVKLDITNLRCKLCDAEMESIEPLMTHLTERHGKKLYMDIKSHILPFKFNDETLRCIFCPNDFNTFKVLQGHMNVHFRNFICETCDSGFVTRNMRRNHMKTHETGSFICSFCPKVYDTLLKQRAHEKQVHRHPKMNLCPYCNERFRDFTQKVRHLKEAHGVQKESPKCKACERSFETMAALSVHIKRDHLIQRPHKCSHCDMSFYVKAQLRNHFVIHSGTREFACTVCLKTFGRKKTLSDHMRIHTDDRRHKCKHCGMAFVQKSSLRSHVRSNHSDLHQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -