Dang026021.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829501.1:37794-41238[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.044 2.8 9.3 1.5 1 23 115 138 115 138 0.95 2 15 2.3e-06 0.00015 22.7 3.4 1 23 158 180 158 180 0.98 3 15 0.0011 0.068 14.3 0.1 1 23 204 226 204 226 0.97 4 15 1.3 81 4.7 0.0 1 21 232 252 232 253 0.91 5 15 7.9 5e+02 2.2 0.6 1 10 333 342 333 345 0.90 6 15 5.8e-05 0.0036 18.3 2.6 1 23 356 378 356 378 0.98 7 15 1.1e-05 0.0007 20.6 1.3 1 23 384 407 384 407 0.98 8 15 0.0012 0.078 14.2 0.3 1 23 413 435 413 435 0.93 9 15 6.3e-06 0.0004 21.4 4.5 1 23 441 463 441 463 0.99 10 15 3.3e-05 0.0021 19.1 4.4 1 23 469 491 469 491 0.99 11 15 0.00047 0.029 15.5 0.8 3 23 499 519 497 519 0.96 12 15 5.5e-05 0.0034 18.4 0.3 1 23 525 547 525 548 0.96 13 15 0.00052 0.032 15.3 5.5 1 23 554 576 554 576 0.98 14 15 0.001 0.064 14.4 5.5 1 23 582 604 582 604 0.97 15 15 0.00038 0.024 15.8 0.1 1 23 610 632 610 632 0.98
Sequence Information
- Coding Sequence
- ATGTCTTGGGAGTGTGCGGAGGTGAAGGAGGAAGCGGCGCGGGGGGAGGATGGGGCGCCGTGGGCCGAGCTGTGCGCGGGGCTCGAGGTCAAGCGGGAGCTCGATTTCGACCCCGAGCTGACGCGCGCTGAGAGAGGCTCCTGGCGGCTACCAGGTGCAGGTAGGGCTAAGTATGAAGGTAACATCCCAGAGCTCAATGCAGAAACCGTGAACAAACCCACGGACTTTGCTTCCAACCACACTGACCCTTGTGCCGGTAAGGTTCCTAAACTTCACGATTATGATAAACTGGTCTCGCTCAAACCTTGCTTTGTTAAGCTAGAACGGATTGTCCACAAGAAACACAAATGCCCAATATGCCAGAAGGCACTGCTCCGAAAGGTAGGGCTCAAACTTCACATCCTGCACACTCACACTCAAGAGGAGATTGATACCATCAAAATTGACACCAAACTAGACAAAAACAAGAAATTCAAGTGCCATATTTGTGGTACGCGGCTGTCCCGTAAATCTAATTTAGTTAAGCATCTGAAAAACCATGAGAAGCAAGACCCTTTCACGAAGCAAGTACGCAGCAAAATACTTAAGGGTACAATGATCAAAAATAACTACACATGTGATGTTTGCGGAAAGCAGATAGCGACCAAATGGAGTCTGGGAAGGCACCTGGCCCAGCATGAGAAGGAAGGGCCCTTTGCTTGTGAAATCTGCAACGGACAGTTCAAAGCCACATGGGAGCTTGTGGAACACTTACAGCTTGCAGCTTGCAAACCTTGTGAAGAAGCAAAGGTTGAGCGTTACTCTGGCGAGAGGGTCGCAAAGGACAAAGTTGGGAAGTCCTGGTCTTCAGGTCTTGAACCCACAAGTGATGATAATGAAAGCAATACTTTgaaatcttttaataaaaagactGTTAGCAGCAGTGAAGATGGTGGGAGCGAAAAAGAAAATTCATCTGACGAGGACATGTTTGACCTAGAAACTGATGAAGAAACATACTACTGCGGAATTTGCGAGAAGCATTACGACATCTCTCGTGGTCACAAGTGCTTTCGCGATAAGAAATATTCCTGCAAAATTTGCAAGAAAAAGTTTAAGTATCAGTGGGATTTGGACACCCATTTCCGAGTTCACACCGGGGAAAGACCGTTCTCATGTAAAATTTGCAAGAGAACGTTTCGACAAACAGGCAGCATGAATGTTCATATTAGACGGGCCCACACAGATGAAAGGCCATATCCGTGCGGAACTTGCAAGAAACGGTTTGTCAGTCGTCAAGGGTTGCAAATTCACAGCGTAGTTCACACGGGAGAGACGCCATATTCATGTAAAGTTTGTAAGAAGAAGTTCAGCCGACGTTCCACACTGGATAACCACAAACGGACCCACACGGGAGAAAAACCTTTCCAGTGCGAGTTCTGTCCGAAAAAGTGTACGCAACGCGCTCATTTAACTGCGCATTTGCTGACTCATACTGATGAGAGGCCTTACGGTTGCGACATTTGTAATAAACGCTTTAAATCCACGAGTGCAGCCAAGCGGCACGAGCGGGACCACGCCGGATACAAGCCTTACTCTTGCGACGACTGCGGCAACGCGTTCGCATCCTCGACGGCGCTCGCGCTGCACAAGCGAGTCCACCACACGGGGGAGAAACCGTTCAGATGCAAAGTTTGCAGCAAGCAGTTCGCGCGGAAGTGCCACTTGACCGAGCACGTCGAGAGCCACACCAAAGTGTGGGCGTATTGCTGCGACGTCTGCAAGAGGAGGTTCCAGCGGCGCCAGTATCTGAGGCTCCACATGAAGCTGCACAAGGCGCAGGAGCTGTTCATGTGCGATGTCTGCGGGGAGAAGTTGACAAGCAGCGACGCTTTGGCCTCACATTCACGGAGTCACGACGGGCAGTGA
- Protein Sequence
- MSWECAEVKEEAARGEDGAPWAELCAGLEVKRELDFDPELTRAERGSWRLPGAGRAKYEGNIPELNAETVNKPTDFASNHTDPCAGKVPKLHDYDKLVSLKPCFVKLERIVHKKHKCPICQKALLRKVGLKLHILHTHTQEEIDTIKIDTKLDKNKKFKCHICGTRLSRKSNLVKHLKNHEKQDPFTKQVRSKILKGTMIKNNYTCDVCGKQIATKWSLGRHLAQHEKEGPFACEICNGQFKATWELVEHLQLAACKPCEEAKVERYSGERVAKDKVGKSWSSGLEPTSDDNESNTLKSFNKKTVSSSEDGGSEKENSSDEDMFDLETDEETYYCGICEKHYDISRGHKCFRDKKYSCKICKKKFKYQWDLDTHFRVHTGERPFSCKICKRTFRQTGSMNVHIRRAHTDERPYPCGTCKKRFVSRQGLQIHSVVHTGETPYSCKVCKKKFSRRSTLDNHKRTHTGEKPFQCEFCPKKCTQRAHLTAHLLTHTDERPYGCDICNKRFKSTSAAKRHERDHAGYKPYSCDDCGNAFASSTALALHKRVHHTGEKPFRCKVCSKQFARKCHLTEHVESHTKVWAYCCDVCKRRFQRRQYLRLHMKLHKAQELFMCDVCGEKLTSSDALASHSRSHDGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -