Basic Information

Insect: Ditula angustiorana
Gene Symbol: -
Assembly: GCA_963691745.1
Location: OY829500.1:6962640-6965927[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.018 1.1 10.5 8.5 1 23 93 115 93 115 0.97

2 14 0.007 0.44 11.8 1.0 1 21 121 141 121 142 0.94

3 14 1.2e-05 0.00078 20.4 2.3 1 23 148 170 148 170 0.98

4 14 0.0019 0.12 13.6 3.3 1 23 176 198 176 198 0.98

5 14 2.1e-05 0.0013 19.8 2.0 1 23 204 226 204 226 0.98

6 14 0.0021 0.13 13.5 0.4 1 23 232 254 232 254 0.97

7 14 0.0013 0.079 14.1 1.3 1 23 280 302 280 302 0.98

8 14 6e-07 3.7e-05 24.6 3.2 1 23 308 330 308 330 0.98

9 14 0.00045 0.029 15.5 2.4 1 23 336 358 336 358 0.97

10 14 8.7e-05 0.0055 17.8 0.2 1 23 364 386 364 386 0.98

11 14 2.1e-06 0.00013 22.9 1.2 1 23 392 414 392 414 0.99

12 14 0.0032 0.2 12.8 1.2 1 23 419 441 419 441 0.97

13 14 1.4e-06 8.7e-05 23.4 0.3 1 23 447 469 447 469 0.98

14 14 4.7e-06 0.0003 21.8 0.6 1 23 475 498 475 498 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.018	1.1	10.5	8.5	1	23	93	115	93	115	0.97
2	14	0.007	0.44	11.8	1.0	1	21	121	141	121	142	0.94
3	14	1.2e-05	0.00078	20.4	2.3	1	23	148	170	148	170	0.98
4	14	0.0019	0.12	13.6	3.3	1	23	176	198	176	198	0.98
5	14	2.1e-05	0.0013	19.8	2.0	1	23	204	226	204	226	0.98
6	14	0.0021	0.13	13.5	0.4	1	23	232	254	232	254	0.97
7	14	0.0013	0.079	14.1	1.3	1	23	280	302	280	302	0.98
8	14	6e-07	3.7e-05	24.6	3.2	1	23	308	330	308	330	0.98
9	14	0.00045	0.029	15.5	2.4	1	23	336	358	336	358	0.97
10	14	8.7e-05	0.0055	17.8	0.2	1	23	364	386	364	386	0.98
11	14	2.1e-06	0.00013	22.9	1.2	1	23	392	414	392	414	0.99
12	14	0.0032	0.2	12.8	1.2	1	23	419	441	419	441	0.97
13	14	1.4e-06	8.7e-05	23.4	0.3	1	23	447	469	447	469	0.98
14	14	4.7e-06	0.0003	21.8	0.6	1	23	475	498	475	498	0.97

Sequence Information

Coding Sequence: ATGTCACTGGAATGTGTTCGAGTTAAGAAGGAGGCCGATTGCCTCGTCGAAGACACCGTCAAGCTGGAGATAGAGGTGCAGCGGAGCACCGACGACTCGCTGCGGTTGCCAGAAAATGACTTCACTGTCCAAGttattAAGGAAGAGACTGACACTTACCACGAGGAAGTAAAGGGCTATCCCTCGGAAGAAGAGGACAGCTGTAAAAACGAGTGCCCCTTCACACCCCAAGCATGCTTGCTCAAGCTGGAACAACTTATTGGTGATAAAAAGAGATATGTCTGCAAAATTTGCCACAAAACTTTTGTACAGAAGAGAAAACTGCTCTGTCATATGCACAACCACATCATCAAGAAACACTACTCGTGCGATCTATGCAAAGGGAAGTTTATGACGGAATCTCAATTAAAaaagcataaacaaaacaactgCGAAAGGAGTTACAGTTGTAATTTTTGCGAAAAACAATTCGCAAAAAAGAGCCAATTGCGGATTCACAAAAGGATTCATACGGGCAAGAAACTGTTCACCTGCAGTATATGTCACCAGCAGTTTCTGAGGAAAGACTATCTGATGAATCACATACAACAGCACGCAGCACAGAAACCTTTCACGTGTGACTTGTGTGGGAAAAAGTTCCGATTCAAACAGTCTTTGGTTTCCCATCTGCAGAACCACGACGGAAAGCGACCCTATTCATGCGATGTTTGCAAAGGACAGTACCCTACAAAGTCGGCATTAGCAAAGCACAAACAAAACCATGAAGAGAAAACCATTCAGTTTGCGAAAGACACCCTGTTGGAGATACAAAGCAAAAGTGACACAGTCGAGAAACCTTACTCATGTGACATATGCCAAGCGCGATTCCTGCGAAGGGACTCACTGAGTCGTCACACGAAAAGCCACTCCAGACTAGAGCCCTACTCGTGCAAGTTGTGCTCCAAACAATTCACACAACAAAGCTCCTTAAACACTCACATGCGAAATCACACGGGTGAGAAACCGTTCGCATGCGAATTCTGTGACAAGCAATTTTTCAAGAAGTACGTTCTAATCACACACCGAAGGACGCACACAGGCGAGAAACCGTATTCGTGCGATCTATGCCAGAAGGGATTCAGCTACCGGGCGACGTGGATAAACCACATGGAAGTTCATACAGGTGAAAAGAAATACACATGCGAAGTTTGCGACAAGCAATTTGCCACCCAGACCTACCTGACGTCCCACAAGAGGATACACAGGGAGAAGCGGTACGCTTGCGTGTTCTGCGACCGACACTTTGCTAAGAAGTCTACCTTGATCCCTCATTTGAGGTTGCACACGGGCGAGAAACCATTCTCCTGCGAGGTGTGTGACAAAAGATTCGTAGTGAAGCCGAGCCTTATCCTCCACATGCGGACTCATACGGGGGAAAAACCTTACACTTGTGAGATATGCGAGGTGCAGTTCAGTAGACTCTCGAACCTTGAGAGGCATAAGCAGAAGATTCACATAGATTTGATGCTGGATGACAAGTTTTTAACGGTTGAAACGTCTGAAGGTAACGCTGATACGAACAGCACGTGA
Protein Sequence: MSLECVRVKKEADCLVEDTVKLEIEVQRSTDDSLRLPENDFTVQVIKEETDTYHEEVKGYPSEEEDSCKNECPFTPQACLLKLEQLIGDKKRYVCKICHKTFVQKRKLLCHMHNHIIKKHYSCDLCKGKFMTESQLKKHKQNNCERSYSCNFCEKQFAKKSQLRIHKRIHTGKKLFTCSICHQQFLRKDYLMNHIQQHAAQKPFTCDLCGKKFRFKQSLVSHLQNHDGKRPYSCDVCKGQYPTKSALAKHKQNHEEKTIQFAKDTLLEIQSKSDTVEKPYSCDICQARFLRRDSLSRHTKSHSRLEPYSCKLCSKQFTQQSSLNTHMRNHTGEKPFACEFCDKQFFKKYVLITHRRTHTGEKPYSCDLCQKGFSYRATWINHMEVHTGEKKYTCEVCDKQFATQTYLTSHKRIHREKRYACVFCDRHFAKKSTLIPHLRLHTGEKPFSCEVCDKRFVVKPSLILHMRTHTGEKPYTCEICEVQFSRLSNLERHKQKIHIDLMLDDKFLTVETSEGNADTNST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -