Dang026062.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ditula angustiorana
Gene Symbol
-
Assembly
GCA_963691745.1
Location
OY829501.1:864138-870378[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.2e-05 0.00077 20.5 1.5 1 20 295 314 295 316 0.95
2 16 0.0015 0.092 13.9 6.0 1 23 382 404 382 404 0.97
3 16 5.7e-05 0.0036 18.4 1.9 1 23 424 446 424 446 0.97
4 16 0.0033 0.21 12.8 0.6 1 23 469 491 469 491 0.97
5 16 0.00078 0.049 14.8 0.1 1 21 497 517 497 518 0.95
6 16 0.26 16 6.8 0.3 1 20 589 608 589 610 0.93
7 16 0.00013 0.008 17.3 0.5 3 23 616 636 615 636 0.97
8 16 0.00092 0.058 14.6 0.4 1 23 642 664 642 664 0.92
9 16 9.5e-07 6e-05 23.9 1.0 2 23 671 692 670 692 0.97
10 16 0.00049 0.031 15.4 1.1 1 23 698 720 698 720 0.98
11 16 0.0069 0.43 11.8 3.5 1 23 726 748 726 748 0.98
12 16 1.4e-05 0.00089 20.3 2.5 1 23 754 776 754 776 0.98
13 16 0.00078 0.049 14.8 1.8 1 23 782 805 782 805 0.96
14 16 5e-05 0.0031 18.5 2.2 1 23 811 833 811 833 0.98
15 16 0.0077 0.49 11.6 6.9 1 23 839 861 839 861 0.96
16 16 0.00023 0.014 16.5 0.1 1 23 869 891 869 891 0.96

Sequence Information

Coding Sequence
ATGACCAAACAACATTTTGATGACATATCGTGGGAGCCTTTTTCACCAGCAGAAATACTTAATACTGTTAGATTAATGGAAAATAAGAAATCTTTTGGTATTGACGAAATACCAATATCAGTAGTTAAGAGTTGTGTAGATATACTCTTGGGTCCATTTGCTCACCTGTTTAATAAATGTTACGATCAAGGTGTATTTCCATGCCAGTTGAAAGTACCTAGGGTGTTACCTGTTTATAAGAAAGaCTTAACTGACTTCActgataaaactcaaataatgttatttaaacaTAACTCAAAAAAGACTGACAAGCTTGTTGCGGTCGTTAATGGAGCTTTAATAGACGTAGTTGACACTGTAAAATTCCTCGGTATTCGTATTGATGCAGCTCTAAATTGGAAACAGGAGCTGGAGGCCGTTGAACATTCTATTCTCTCAGCCTGTTATGCTCTAAGGAGCCTTAGGGAGGAAGTAACAATCGAACAACTCAAGGTAGTATACTACGCGTTGGTAGAGTCTAAGTTGCGCTATAGCATCAAGTTCTGGGTTTATATGTCGTCGGAATGTTTGCGGGTGAAAGAAGAGGTACTGGATGAGGGCGAAGCAGAGGGGCCTCAATGGGAGGCCCTGTATGCTGGCCACGAGATCAAGCCTGACCTTGTGGTGGGGCCCGAAGTGCTGCAGGCTCTGTATAGCGCCTGTGCGCTGCCAgGTGCATCGGAAAGTGACACTAACATCTATGATGAATCTAGAGATGTTTCCTTCACCAACTCTGGTCTTGAAGACCCTAGCGCTAGCCAGAGTCCTGAAGGCAACAATGATACACAGATCTCTCTGAAGCCTTGTTTTGTTAAATTGGAACGCCTTGTCAACATGAAAAAGCATAAATGCGGGATATGCCAAAAACGGTTCATCCGAAAAGAGAATCTTACCCGCCACTTGTTCAGTCTTACTAATGCTTGGAATGAAAGTCAAACTGAACTCGATATTGGTGTCCGTTATATATTTAAGAGAGCCCCCTTCACGCACTATAGTCTTGGCAACTCTACTGCGAATAAGAGCATTAGTTTCAGCGATGGTAAGAAACAGATGTTTGTTAAACCTTGCTATGTTAAACTAAAACGTATTCACTGCAATATGAAGCACGAATGCAAGATATGCCATAAGATGCTCTGCCGGAAACAGGGACTTGTCCGTCACATGGTCACACATACTCAGGAGGAGATAAATAGCCTTAAAGCAGACAAGCAATTTGACAATATCAGCAAACATGTATGCCACATATGTGGTGCGAGCTTGTCGCGAAAAGATAGCTTAGTATCACATCTCAAGAGACATGCGAAAGATCCTTTTAAGGCGCAACAGCGTAGGAAAATACCTAGAGGTAGCATTATAAAGGAATCATATGCATGTGATGTTTGTGGGAGATTGTTGTCGAGAAAATGTGGTTTAGTTAGGCATTTACAGTTGCATAAGGATCAAGGGCCCTTTGCATGTAAAGACTGTAACAAGCAGTTCAAATTTGCTTGGGAGCTTGTGGATCATATAAAGCTTGCAACTTGCAGGCCTGACAAGGAATCTTCTAGCAAAAGTATAAAAGACTCAGCGCTAAAGACTGGTTCTATTAGACGTGACTGCATCAGCAAAGAAAATAGAGACCAGGCTTTGAAAAGCTTTGATGAAACTGTTCCAAGTGATGCTTCAAGTGAGGAGGATCTGTCATCCGACAGGGACAGTGTGACACTAGAAACTGATGAAGAATCATACTACTGCGGAGTTTGTGAGCAACAATTCGAGACCATGTCGGCTCTGAGTGGTCATACATGCGCAAGGAAACCTAATTTTTGCAAAATTTGCAAGAAAACATTTGATTACCCGGCTAAATTAGCAGCACACACTCGGTTACACACAGGCGAGAAGCCTTTCTCTTGTGACATTTGCAACAGGGCTTTTAGGAtcgaagaatatttaaaaacccACATGTGGACACATACTGGAGAAAAACCGATATCATGCAAAATCTGCAACAAGCGATTCCGCATTGCGGGTAATTTGAAAAGCCATATGCGGACCCACACCGGAGAGAAGCctttttcatgcaaaatttgCAATCAACAGTTCAAGCAAAAACAGGCACTGCTGGGCCACAGTCGAATCCATACGGGAGAGAAACCATTTTCATGCCAATTCTGCAAGAAGTCCTTCAGGACTGGTCACATGGTACGCGTGCACGAACGAATCCACACGGCTGAGTTGCCGTACGCTTGCGAATTTTGCCCGAAGAAGTTCAGACAGAACGGTCACTTGTCCAGTCACCGGCGCATCCATACCGGCGAGAAACCTTTCAGCTGCGACATCTGCAAAGAAAGTTTTACGGATCGCACGAGACTAACATATCACAACCGAATCCGCCACACCGGAGACAAACCGTTCACTTGCAAAGTGTGCCAGAAACAGTTTGCTTTCAATACTTATTTGACTGAACATATGCAGAGTCACACGAAGGACTGGCCATTCTGTTGCCACGTTTGCAGTAAACGCTTCCAGCGGAGGCAGTATCTGAGACAGCACCTCATACTCCACAAGGAGCTGAAGCCGTATATACACATGTGTGATGTCTGCGGAGAGAAGTTTATGACCAGCGAGGCGCTGATGGCGCATGCGCGCGGCCACGCCTGGTACACTGAGCCGCTAGCATAA
Protein Sequence
MTKQHFDDISWEPFSPAEILNTVRLMENKKSFGIDEIPISVVKSCVDILLGPFAHLFNKCYDQGVFPCQLKVPRVLPVYKKDLTDFTDKTQIMLFKHNSKKTDKLVAVVNGALIDVVDTVKFLGIRIDAALNWKQELEAVEHSILSACYALRSLREEVTIEQLKVVYYALVESKLRYSIKFWVYMSSECLRVKEEVLDEGEAEGPQWEALYAGHEIKPDLVVGPEVLQALYSACALPGASESDTNIYDESRDVSFTNSGLEDPSASQSPEGNNDTQISLKPCFVKLERLVNMKKHKCGICQKRFIRKENLTRHLFSLTNAWNESQTELDIGVRYIFKRAPFTHYSLGNSTANKSISFSDGKKQMFVKPCYVKLKRIHCNMKHECKICHKMLCRKQGLVRHMVTHTQEEINSLKADKQFDNISKHVCHICGASLSRKDSLVSHLKRHAKDPFKAQQRRKIPRGSIIKESYACDVCGRLLSRKCGLVRHLQLHKDQGPFACKDCNKQFKFAWELVDHIKLATCRPDKESSSKSIKDSALKTGSIRRDCISKENRDQALKSFDETVPSDASSEEDLSSDRDSVTLETDEESYYCGVCEQQFETMSALSGHTCARKPNFCKICKKTFDYPAKLAAHTRLHTGEKPFSCDICNRAFRIEEYLKTHMWTHTGEKPISCKICNKRFRIAGNLKSHMRTHTGEKPFSCKICNQQFKQKQALLGHSRIHTGEKPFSCQFCKKSFRTGHMVRVHERIHTAELPYACEFCPKKFRQNGHLSSHRRIHTGEKPFSCDICKESFTDRTRLTYHNRIRHTGDKPFTCKVCQKQFAFNTYLTEHMQSHTKDWPFCCHVCSKRFQRRQYLRQHLILHKELKPYIHMCDVCGEKFMTSEALMAHARGHAWYTEPLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-