Basic Information

Insect: Ditula angustiorana
Gene Symbol: -
Assembly: GCA_963691745.1
Location: OY829501.1:44382-47419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.7e-07 5.5e-05 24.1 1.2 1 23 133 155 133 155 0.99

2 15 7.6e-05 0.0048 18.0 0.3 1 23 175 197 175 197 0.98

3 15 0.0002 0.013 16.6 0.3 1 23 221 243 221 243 0.98

4 15 0.007 0.44 11.8 0.1 1 21 249 269 249 270 0.94

5 15 1.3 81 4.7 1.0 1 20 338 357 338 359 0.91

6 15 7.1e-05 0.0044 18.1 0.6 2 23 366 387 366 387 0.97

7 15 6.3e-06 0.0004 21.4 2.7 1 23 393 415 393 415 0.98

8 15 1.5e-05 0.00093 20.2 2.3 1 23 421 443 421 443 0.98

9 15 4.8e-06 0.0003 21.7 0.6 1 23 449 471 449 471 0.98

10 15 5.1e-05 0.0032 18.5 5.4 1 23 477 499 477 499 0.98

11 15 0.036 2.3 9.5 6.0 1 23 505 527 505 527 0.97

12 15 3.2e-05 0.002 19.2 1.5 1 23 533 555 533 555 0.98

13 15 1.8e-06 0.00011 23.1 3.2 1 23 561 583 561 583 0.98

14 15 5.7e-06 0.00036 21.5 5.4 1 23 589 611 589 611 0.98

15 15 0.00038 0.024 15.8 0.1 1 23 617 639 617 639 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.7e-07	5.5e-05	24.1	1.2	1	23	133	155	133	155	0.99
2	15	7.6e-05	0.0048	18.0	0.3	1	23	175	197	175	197	0.98
3	15	0.0002	0.013	16.6	0.3	1	23	221	243	221	243	0.98
4	15	0.007	0.44	11.8	0.1	1	21	249	269	249	270	0.94
5	15	1.3	81	4.7	1.0	1	20	338	357	338	359	0.91
6	15	7.1e-05	0.0044	18.1	0.6	2	23	366	387	366	387	0.97
7	15	6.3e-06	0.0004	21.4	2.7	1	23	393	415	393	415	0.98
8	15	1.5e-05	0.00093	20.2	2.3	1	23	421	443	421	443	0.98
9	15	4.8e-06	0.0003	21.7	0.6	1	23	449	471	449	471	0.98
10	15	5.1e-05	0.0032	18.5	5.4	1	23	477	499	477	499	0.98
11	15	0.036	2.3	9.5	6.0	1	23	505	527	505	527	0.97
12	15	3.2e-05	0.002	19.2	1.5	1	23	533	555	533	555	0.98
13	15	1.8e-06	0.00011	23.1	3.2	1	23	561	583	561	583	0.98
14	15	5.7e-06	0.00036	21.5	5.4	1	23	589	611	589	611	0.98
15	15	0.00038	0.024	15.8	0.1	1	23	617	639	617	639	0.98

Sequence Information

Coding Sequence: ATGTCTTCGGAATGTGGAGAGGTGAAAGAAGAGGCCCCGTGGGAGGACGAGGGCGTGGGGGCGCTGTGGGCAGACCTGTACGCCGAGCACGAGGTCAAAAGAGAGCTTATGCTGGGCCCTGAATTCAAAGATGCTCAAGATGGGAACTTCACGCTGCCAGTTGCTAATGGATCTGCAACGGGCGCCAGCATCGAGCGGCTCATCGCAGAAGCAACGCAGGAATACGACAACGTCACTGCTTCCATTAACGCCTGCTTTGAGGACTTGGACGCTGGCGGGCTCAGCCCCTACGCTAGCGAGGCTAGCGGACTCAGCCCCTACGCTAGCGAGGCTAGCGCGGAACCGCTCGCTCTTAAAGCTTGCTACGTTAGGCTAGAACGCATTGTCAAGAAAACATACAAATGCAAAATATGCCAGAAGGCACTCAGTCGGAAAAGCGGTCTCTTCCGCCACATCCTCACTCACACTCAAGAGGAAATTGATACCATTAAAATTGAgaagaaaattgtaaaaaaaaagaaattcaaaTGCCGTATCTGTGGCACAGGGCTGTCCCGGAAAGATGCTTTAGTTAACCATCTCAAAAACCATGCGACGCAAGACCCTTTCAAAAAGCAACTGCGTAGGAAAGTACAGAAAGATAAAATCATCAAGAATTATTACACATGTGATCTTTGCGGTAAACAGACGACCACGAAATGGGGCCTGGGCCGACACCTGGCCAAGCATGAGAACGAAGGGCCCTTTGCTTGTGAAGTCTGCCACAAGCAGTTCAAACTCGCGTGGGAGCTTGTGGATCACTTAAAGCTTGCGAATTGCAAGCCTGGCCAAGATACAAACGGAAAGCCTTGCTCGGACGAGCACGCCTTAGAGAACTCAGTGCCAAAGTCGGATTGCAGCTATGAAAATGAAAGCAAGACATCGAAATATTTGTCGGAAGCTTCTGTCACTAGCAGTGAAGATGATTCATTCGACGAGGATATGTTTGAACTAGAAACTGACGAAGAAACATACTACTGCGGAGCCTGTAAGAAACAATTCCAGACAGTATCCTCTCTGGGTGAACACGAGTGCAATCCCCCGAAGAAACTTCCTACATGCAACGTTTGTAAGAAAACGTTCAAGTACCCCGGCCTATTGGTAACTCATAATCGAGTTCACACAGGTGAGAAACCATTTTCCTGTAAGACTTGTGACATGCAATTCCGGCTACCGAGCCATTTGAAAATCCATATCCGCACCCACACCGGCGATAAGCCGTATTCGTGCGACTTTTGCGATAAGAAATTCAGCGACAACACCAAACTGGATAAGCATACTCGAATTCACACAGATGAGCGACCGTATCCTTGCAAGATTTGCAGTAAACGGTTCAAATTGCCAGAGACTCTGAAAAACCATGTACGAGTGCACTCCGGGGAGACACCGTTCCATTGCGAATTTTGCCCAAAACAGTTCAAACAGAGAGCTCATCTGGTTCGCCATCGCCGCATCCACACAGGCGAGAAACCTTACAGCTGCAAAGTGTGCAAGAAGAAATTTTCAGACAAGTTTGTCCTAACATGCCACAGCCGAACGCACACGGGCGAAAAGCCTTACTCCTGCGACATCTGCGACAAAACGTTCACACACTTGTCTACCGCGGTGATGCACAGGCGAGTGCACACAGGCGAGAGACCGTATTCGTGCAAGGTTTGTAAGAAACAGTTCGCGCGGAGTTCTCACCTGTCCGATCACATGAAGATTCATTCTAAAGTTTGGGCGTACACGTGTGACTTCTGTAAGAAGAAGTTTAAGCGCCGCGAGCACTTGGCGCGCCACCTGCGGCTGCACACGGGCGAGAAGCCCTATATGTGCGAGGTCTGCGGCGAGAGCTTTATCGACGGCTCGGCGCGCAACAAGCACCGCCGCGGCCACGCCGGACAATGA
Protein Sequence: MSSECGEVKEEAPWEDEGVGALWADLYAEHEVKRELMLGPEFKDAQDGNFTLPVANGSATGASIERLIAEATQEYDNVTASINACFEDLDAGGLSPYASEASGLSPYASEASAEPLALKACYVRLERIVKKTYKCKICQKALSRKSGLFRHILTHTQEEIDTIKIEKKIVKKKKFKCRICGTGLSRKDALVNHLKNHATQDPFKKQLRRKVQKDKIIKNYYTCDLCGKQTTTKWGLGRHLAKHENEGPFACEVCHKQFKLAWELVDHLKLANCKPGQDTNGKPCSDEHALENSVPKSDCSYENESKTSKYLSEASVTSSEDDSFDEDMFELETDEETYYCGACKKQFQTVSSLGEHECNPPKKLPTCNVCKKTFKYPGLLVTHNRVHTGEKPFSCKTCDMQFRLPSHLKIHIRTHTGDKPYSCDFCDKKFSDNTKLDKHTRIHTDERPYPCKICSKRFKLPETLKNHVRVHSGETPFHCEFCPKQFKQRAHLVRHRRIHTGEKPYSCKVCKKKFSDKFVLTCHSRTHTGEKPYSCDICDKTFTHLSTAVMHRRVHTGERPYSCKVCKKQFARSSHLSDHMKIHSKVWAYTCDFCKKKFKRREHLARHLRLHTGEKPYMCEVCGESFIDGSARNKHRRGHAGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -