Dang002779.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829471.1:23630033-23631882[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-08 4.1e-05 23.9 0.1 3 37 17 51 15 60 0.94 2 2 2.8 3.4e+03 -1.4 0.0 9 22 51 64 51 64 0.82
Sequence Information
- Coding Sequence
- atggtacgaacttacaaaaaaaaacgttccaGAGGCAGTTGGTCTGTAGAAAGCATGAAACACGCAATTGATGCAGTTTTAAGCAAATCAGCAGGTTACATAAAAACAGCTCAATTGCACGGTGTTCCACAGTCCACATTGGAGCGTCACGTCGCAAAAATAAGGAAGGGCGAGGTATCTCTTAATTCAGCTCCAGGCATAGATTGGTTAAAAGGCTTCATGAAACGTCACCCGGATTTATCATTTCGAAAACCAGAAGCCACATCGGCAGCGCGAGCTATGGGTTTTAACAAAGTGGCCGTCAATAAATTTTATTCTTTGCTTGGGGAACTATATGACAAATATAATTTAACGCCAGATAGAATATATAACTGCGACGAGACTGGAATATCATGCGTCTCCAAAAAAAAGAGCAAAATCATTGCTGAAAAAGGAAGAAAACAAGTAGGCTCCCTTTCTTCTGCAGAACAAGGGCAGACGATTACCGTCGAGATATGTTTGAATGCAGCTGGAACTTATATGCCTCCCATGCTAATATTTCCTCGACAGAGAATGAAGCAGCAGTTATTGGATCGAGCTCCTCCAGGGACGACGGCAGAATGCAATGCTCGAGGCTGGATGACAACTGAAACCTTCATGAGCTGGTTCCAAGGGTTCGTCAAATTTTCTGGGGCCTCAATAACTAAGCCGGTCTTGTTACTTCTAGATGGGCACGTAACGCATACGCAAAATATAGAGGTTATTGAAAATGCAAATTCAGATTTTTTAGCTGCATCAACAACAGACATACCGTTTACAAATGATGAGCCTGAAACAGCTTCTTCAACTGCTGAAATTCAGCAACCACTGTCGCCTCCCCTTGAAGAGAAGACTCAAAAAGCTCGCTCTGATAGAGAAAATGTTAAGGAGGATGTCTTATGCATCTATTGTGTTGACTCGAACCACACTTATTTGAAGTCTTCGGAGCGTTGGGTGGCGTGCCAGCTATGTGGACAGTGGGCCCATACAGCCTGTGCAGGAGTTGATGACGCAGATTTAGAAGAAATCCACATTTGCTTATTCTGTgagaaataa
- Protein Sequence
- MVRTYKKKRSRGSWSVESMKHAIDAVLSKSAGYIKTAQLHGVPQSTLERHVAKIRKGEVSLNSAPGIDWLKGFMKRHPDLSFRKPEATSAARAMGFNKVAVNKFYSLLGELYDKYNLTPDRIYNCDETGISCVSKKKSKIIAEKGRKQVGSLSSAEQGQTITVEICLNAAGTYMPPMLIFPRQRMKQQLLDRAPPGTTAECNARGWMTTETFMSWFQGFVKFSGASITKPVLLLLDGHVTHTQNIEVIENANSDFLAASTTDIPFTNDEPETASSTAEIQQPLSPPLEEKTQKARSDRENVKEDVLCIYCVDSNHTYLKSSERWVACQLCGQWAHTACAGVDDADLEEIHICLFCEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00889124;
- 90% Identity
- -
- 80% Identity
- -