Basic Information

Gene Symbol
ct
Assembly
GCA_963691745.1
Location
OY829492.1:1002638-1021669[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-27 5.9e-24 84.6 0.0 3 70 235 303 233 310 0.94

Sequence Information

Coding Sequence
atggtggaagtgACCCTGACAGACCCTGCACAAGATCCTAACATCTGCAAAGCACCGCAACGCGCTTCACAGCGCTTTATCTCGCTTGCGTTTGAATCTAGAATACAGTCAGCTTCAGTGTTGTCATTAATCGCGCAACTGGTGGAGGACGTGCGGAGACTGCAGGCGTCGCTGGCGGCGCTGCAAGAGGCGCACGCGCAACAGCTGCAGCGGTTGGAGGAGCGGCTGGACGAGAAGAAACAGCACATAGCGCGGCTGGAGGCGCGGCTGGACAACCAGCGCGACTATGAGGACGTGAAACGGGAGATCAGCATGCTCCGATCGATGGACCTCCGAGACGCGGCGGAGAGAGCCGAGCGCAAGCCCGAGCCGCTCCGGTCgccggctgcgcccgcgcagcgcgacGACGACGAGCGGGAGCGGAGTAGCGAGCGACGGGAGACAGGTGGCGAGGACTGGCCGAGCACGCCCCCGCTCAACAACAACACGACCCACCACAACAACAACCCGCCGCTGCCCCTGCCGCCGCCGAGCCCCTTCCGTTTCGAGGAGCACCGACCCTACCGCTTCGCGGACGACATGGGCCCGTTGCCCCCCGGAGCTCTGGTCGGGAGGCTCGGCGACTCCCTCATTCCCAAAGGAGACCCCATGGAAGCGAGACTCCAAGAGATGCTGCGGTACAACATGGACAAATACGCGAATACCAACCTGGACACGCTGCACATCAGCCGACGGGTGCGCGAGCTGCTGTCCGTCCACAATATAGGACAGAGGCTGTTCGCTAAGTACGTCCTCGGACTCTCCCAGGGGACGGTGTCGGAGCTCCTCTCGAAGCCGAAGCCCTGGGACAAGCTGACCGAGAAGGGGAGAGACTCGTACAGGAAGATGCACGCCTGGGCGTGTGACGAGGCCGCTGTGATGCTGCTCAAGTCCCTCATTCCTAAAAAAGGTACCATTTGA
Protein Sequence
MVEVTLTDPAQDPNICKAPQRASQRFISLAFESRIQSASVLSLIAQLVEDVRRLQASLAALQEAHAQQLQRLEERLDEKKQHIARLEARLDNQRDYEDVKREISMLRSMDLRDAAERAERKPEPLRSPAAPAQRDDDERERSSERRETGGEDWPSTPPLNNNTTHHNNNPPLPLPPPSPFRFEEHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKGTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00410070;
90% Identity
iTF_00660098;
80% Identity
-