Basic Information

Gene Symbol
ct
Assembly
GCA_963691745.1
Location
OY829492.1:985036-990694[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7e-32 3.7e-28 98.0 0.0 4 77 326 400 324 402 0.96
2 2 1.1e-30 5.3e-27 94.3 0.0 3 75 520 593 518 597 0.95

Sequence Information

Coding Sequence
ATGCACATCGTAACGACCGTGGGATCGAAGGAAGGCAATATGGGTCCAGGGTTTGGGAGAGGGGAAGGCGAGGGAGACGAGCGGCTGGCCCATATCCTGACAGAAGCCTCCCACCTCATGAAGACCCCCAGCCAGCCAAACAACGACGACTCCAGAAGCAATGACGACTCGAACTCACCCCGCACGCAGTGCCTCTCGCCGTTCTCTAATAAGGATTCGAGTCAAAACAGAAGACTGAAAAAATACGAGAATGACGATATTCCCCAAGAGAAGGTGGTCCGCATTTATCAGGAGGAGCTCGCGAAGATCATGACAAGGAGAGTGGATGACATGCGCCACAGCCGCGACGGGTTTCCTGGAATGTTTCCTCCTTTTTTCAGCGGCGGTATGCCACCACACATGGAGCGGCCTCCTGAAGATCTCCGAATGGCACTGGAAGCGTATCACAGGGAACTCGCCAAAATTCAGCCTGGTGGGAACATCCCCAACCTTCACAATCTCCCAGGAATGCCACCCTTCCCGAATTTGCTAGCACTGCAGCAGCAAGCCATGCAGCAGGCGCAAAACCAACACATAAATGGGTCTGGAGCCATCCAAGACCTTTCTCTTCCAAAAGACAAGAACGCCAAAATGAATGGTATTACTGATAGCGATAAAGATAAGCCAATGGACGCTGAGGAGGCTATAAGGCACGCGGGGAGCGCGTTCTCGCTCGTCAGGCCTAAGTTAGAACCGGGACAGCAGTCGACGGGGTCTTCCGCGTCTAGCCCGCTTGGTAATGCGATCTTGCCACCCGCCATTACTCCCAACGAAGACTACAACAATTCAGCCGCGGCCAGTCCGCTGCAGCGGATGGCTTCTATAACTAATAGTCTGATCTCCCAACCGACCAACCCGACTCACCACACCCCTGCTCAGCGTTCCATGAAAGCCGTGCTTCCACCCATCACTCAACAGCAGTTCGATCTCTTTAACAACCTGAACACTGAAGACATTGTCAGAAGAGTAAAAGAAGCGCTTAGTCAGTACTCCATCAGCCAAAGACTGTTCGGTGAATCCGTACTAGGATTATCGCAGGGGTCAGTCAGTGACCTCCTAGCGAGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGCAGGGAACCATTCATCAGAATGAAAATGTTCTTAGAAGACGATAATGCGGTCCACAAACTGGTCGCGTCGCAGTACAAAATTGCACCCGAGAAGCTGATGAGGACTGGAAACTATAGCGGAGCACCTCCATGTCCGCCAAACATGAACAAGCCGATGCCGCCGACGCAAAAGATGATCTCCGACGCGACGTCCTTGCTCAGCAAGATGCAGCAGGAGCAGTTGCTGGGCGGCGCGCACCTGGCGCACCTGGCGCCGCCCGCGGGCCTGCTGCTCACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCCGCGCTGGACAACAAGGAGCGCAagccgccgccgcacgcgccgcccgccaTGCGTCCGCTGCACCAGCACATCTCGCCGAGCGTCTACGAGATGGCGGCTCTCACTCAAGACCTCGACACGCAGACCATTACGACTAAAATTAAAGAGGCGTTGCTGGCCAACAACATCGGGCAGAAGATCTTCGGCGAAGCCGTGCTCGGACTGTCCCAGGGCTCCGTGAGCGAGCTCCTCTCGAAGCCGAAGCCTTGGCACATGCTGAGCATCAAGGGCCGGGAGCCGTTTATCCGCATGCAGCTGTGGCTGAGCGACGCGCACAACATCGACCGGCTCCAGGCGTTGAAGAACGAGCGCCGCGAGGCTAACAAGCGACGGCGCTCCAGCGGGCCCGGCCAGGACAACTCCTCGGATACTTCCTCCAACGACACTTCCGAGTTCTACCACTCGAGCTCGCCGGGGCCCGCCACGGGGGCGCCTTCCGCCAAAAAGCAGCGCGTGCTCTTCTCCGAGGAACAAAAGGAGGCTCTGCGGCTAGCGTTCGCGCTGGATCCCTACCCCAACATGCCCACGATCGAATTCCTCGCGGCGGAGCTCGGTCTGTCGACGCGGACCATCACGAACTGGTTCCACAACCACCGCATGCGACTGAAACAGCAGGCGCCCCACGGGCTGCCGGCCGAGCCGCCGGCGCGCGACCAGTCCGCCGCGCCCTTCGACCCGGTGCAGTTCAGGCTGCTGCTCAACCAGAGGCTTCTGGAGCTTCAGAAGGAGCGCATGGGGCTCGCGGGCGTCCCGCTCCCGTACCCGCCCTACTTCGCCGCGAACTCGAACCTGGCGGCGCTGATCGGGCGCGGGCTGCTGCCGCCCGACGAGGCGAAGGACCAGGCGTCGGGGCTCGACCTGTCGATGCCGCTCAAGCGGGAACCCGACGGCGACGACTTCGAGGACGACGACGTCGAGAGCAACCTCGGCTCGGAGGACTCGATGGACGACGGGGAGTCGAAGACGGAGCCTAAGGCGGCGTCGACGCCGGCCGGGCGCTCCAGCCGGCGCAAGCCCGCCGCGCCGCAGTGGGTCAACCCGGACTGGCAGGACGAGAAGAAGCGCAACCCCGACGAGGTCATCATCAACGGCGTGTGCGTCATGCGGAGCGACGACTTCCGGCGCGAGGCCGAGGAGACGGTGCGCGTGGAGCCCTCGCCCGTGCCGCGCGACGCCTCGCCGCCCGCGcaggccgcgccgcgcgcgccgcacgtGCCGCACGTGCCGCACGTGCCGCACGTGCCGCacgcgccgccgtcgccgcccgACGTGCTGCCGGAGGACAAGATCAAGGCCGAGGCGGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MHIVTTVGSKEGNMGPGFGRGEGEGDERLAHILTEASHLMKTPSQPNNDDSRSNDDSNSPRTQCLSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVDDMRHSRDGFPGMFPPFFSGGMPPHMERPPEDLRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGSGAIQDLSLPKDKNAKMNGITDSDKDKPMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDYNNSAAASPLQRMASITNSLISQPTNPTHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGGAHLAHLAPPAGLLLTPPGFPPHHAVTLPALDNKERKPPPHAPPAMRPLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPATGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLLPPDEAKDQASGLDLSMPLKREPDGDDFEDDDVESNLGSEDSMDDGESKTEPKAASTPAGRSSRRKPAAPQWVNPDWQDEKKRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPRDASPPAQAAPRAPHVPHVPHVPHVPHAPPSPPDVLPEDKIKAEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01401167;
90% Identity
iTF_00680413;
80% Identity
iTF_00462281;