Basic Information

Gene Symbol
-
Assembly
GCA_963691745.1
Location
OY829499.1:6434769-6452720[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-11 8.4e-08 33.2 0.1 3 89 228 301 226 301 0.87

Sequence Information

Coding Sequence
ATGTGGCGTCGCCGGCCAGAATACGCGCGGCGCGGCTTGGACGAGGTGCTGGCGATCAACGACAAGGTGGTGCTGCGCGCGGAGGACCTGCTCTCGTGGCTGTGCCGCGGCGGCGCGTGGGAGTGGGGGCTGCGCGCGGTGtggcgcggcgcgtgcgctccgcccgcgcagccgcgccGCACGCAGCCGCTGCACCGCGCGCGGCTGGACTTCAGCGACGTCGAGCGCGAGAAGAGCGCCATCACTGAAGACGTGGACAGCCCGGGGGTGGTGGTATTCTCGTACCCCCGCTACTGCCGGTACCGGGCCCTGCTCTCCCGGCTCGAGGGGATCCAGGGCGACTGGCTGAGGGACAGCCTGGTAGCGGCCCTGGGCGGGTACGCGGCCCCCACCAAGAACACGAGGATACTGTATTGTAAGGACACGTTCGAGTACCCCGAGCTCGAGGGCCACGAGTTCGTCTGCAACCAGCTGGCGCCGAAGCTGAAGgggcggccgcgcggccggcgccggcgccgcgccagcAAGCACTCCCCCTCCCCCTCCTCGCGCTCCAGCGACAGCGAGGGGGCGCGCCGcgagccgccgcccgcgcccgccgagACGCCCCGCCGGCTGTCGCTCCGCAACGGCGCCCCGAAGTATAGCGACGACGAAGAGAAGGAGCAGACATCCGAAGACAGGGCGTTTCTCCAGCAGCTGAAGCAGTTCTACCGCGACCGGAAAGAGCCCTTCAAGCTGGCGCACTCGCTTAAGGACCTGTCGCTGCGCTCGCTGTACGTGTCggtgcgcggcgcgggcggctaCGAGGCGGCGTGCCGGCGCAAGCTGTGGCGCCGCCTGCACGCGCAGCAGCCCAACACGGCGCGCCGCCACTACGAGCGATTCCTCCTGCCGCTGGAGAAGCACGAGACCCGGAACGGGCTCCCGCCGCCGCCGAAGCCGAACGGCAAGCTGGAGCCGCCGACCATCGCCACCATCGAGCTGCCGGACTCGCCGCCGCGCTCCCCGCGCTCCCCGCGCGCCCCGCGCTCCCCGCGCCGCACGGACGGCGAGACCGGGGAGCCCGTGCCGCGGGACTTCAGCGTCACCTCCAAGCCGGCCGAGGAGCTGAACCGGGAGTTCCTGGACTCCCTGCCCCAGGAGGAGAGCAAGCTGAAGATAAGCGTGAAGCCGGTGGAGAAGTTACTGGAGGAGGGCGCGGAGAGGCCCGAGGAGAAGGCGAGCGCCGTGCTCGCCGACCTAAAGCACAAACTTAACCTGGGCAACGCGGACACCAAGTTCCTGAGCGAGATAGCGACGGCGCAGCAGGAGCTGGTGTCGAGCAGCGCGCTGAGCTCGCTGTCGAACCTCGTCAACGGCCACGGCCTCCCCAAAGACCAGACGGCCCGGCCGGCGGGGCGCAGCTCGCTGCGCGCGGTGCGGGTCaagccggcgcgcgccgcgcccgccactCCTGCGCAGACGCCGCCGGGCGCGGGCTCGGCGTCGCCGCCGGCGGCCGCCAGCAACTTCGGCATCCACCGCCCGCCCGCCGCGCACAGCGACGACGAGATCGTCGAGGTCCCTTACAAACCCAAAACGCCAGAGATTATAGACTTGGACGAGTACCCCGAGAGCCCGCAGGCCGTCAAGAAGAAGAAGCTGGACATCTTGAAGGAGCGCGGGCTCGAGGTCACCGCGCTGCCCCCCGCGCCCGCctggcccgccgcgccgccgcccctgCTGCTGGCGCCGGCCGTGCGGCACCAGCTCATGACGCAGGCGCAGATCTTCCAGATGTACAACATCGTCCCGCCCGGCTACGCCAACGGCGCGCAGCCGCCCAAGGTCATCCAGGCCACCAGCGCCTTCGGCTCCACCGGCCCCGAGCGGACCGTCTACGGGAACCCCAAGGACCCGTTCATGCCGCCGCCGCACGTGCTGCTCGGCACGCCCGTGCGGGCGCCGCGCAGCgccccgcccgccgcgccgcccgcggacGTGCTGGACCTGACCTGCAGGCCCGCGTCGCCCCCGGCCGCGCAGAAGCCGGCCGTCGAGATCGTCCGGGTCCCCCCCGTCCCGTCCCCGGCGCAGACCGGCTCGGCGCAGAACCTGAGCAAGAACTACACGCTGGTCGACGGGAAGGCGGTCGTCGGCTCCAACCTGGAGATAACGCTGGTCAACCCCAAATCGACGACGCCGACCAAGTCGAGGATACCGCAGAAGAGATCCTCGAACGGGAAATTCGTGTCGGCGAAGACCCCCACGCCGCCGAAAGACTATCCCAAGTTTAGCGCGTCCAAAAAGACCCCCATAGTGGTACCGAATTACCAAGTCAACCCTCGGGATGACGTCTCGCCGACCAGCTCGACCGGCTCGAGAGACTCCCAGACCAATATGCAGGGTAACCTGCTGCAGAACGTCTTCAAAGGGCAGAGCGGCCTGCAGCAGATGATGGATATGCAGAAAAACGTTCCTAATATGCAGTTCATGGACCCTATGTACATGAGCGCGCTGTACAGTAGCCTAGCGGGATCCATGGATCAGAGGCAGCTGGCCATGTACAGGGATTTCATGGCGAGTCAGTTTAGGGGTTACTCTGGTCTGCTAGGGGTCACGCCGACGACGAAAAATTGA
Protein Sequence
MWRRRPEYARRGLDEVLAINDKVVLRAEDLLSWLCRGGAWEWGLRAVWRGACAPPAQPRRTQPLHRARLDFSDVEREKSAITEDVDSPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRRRASKHSPSPSSRSSDSEGARREPPPAPAETPRRLSLRNGAPKYSDDEEKEQTSEDRAFLQQLKQFYRDRKEPFKLAHSLKDLSLRSLYVSVRGAGGYEAACRRKLWRRLHAQQPNTARRHYERFLLPLEKHETRNGLPPPPKPNGKLEPPTIATIELPDSPPRSPRSPRAPRSPRRTDGETGEPVPRDFSVTSKPAEELNREFLDSLPQEESKLKISVKPVEKLLEEGAERPEEKASAVLADLKHKLNLGNADTKFLSEIATAQQELVSSSALSSLSNLVNGHGLPKDQTARPAGRSSLRAVRVKPARAAPATPAQTPPGAGSASPPAAASNFGIHRPPAAHSDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPAPAWPAAPPPLLLAPAVRHQLMTQAQIFQMYNIVPPGYANGAQPPKVIQATSAFGSTGPERTVYGNPKDPFMPPPHVLLGTPVRAPRSAPPAAPPADVLDLTCRPASPPAAQKPAVEIVRVPPVPSPAQTGSAQNLSKNYTLVDGKAVVGSNLEITLVNPKSTTPTKSRIPQKRSSNGKFVSAKTPTPPKDYPKFSASKKTPIVVPNYQVNPRDDVSPTSSTGSRDSQTNMQGNLLQNVFKGQSGLQQMMDMQKNVPNMQFMDPMYMSALYSSLAGSMDQRQLAMYRDFMASQFRGYSGLLGVTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00155097;
90% Identity
-
80% Identity
-