Dlor011861.1
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- GATA-B
- Assembly
- GCA_963555665.1
- Location
- OY743093.1:11221291-11229132[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-17 2.3e-13 50.1 3.0 1 34 156 188 156 190 0.97 2 2 1.1e-17 3.6e-14 52.7 3.0 1 35 223 256 223 257 0.98
Sequence Information
- Coding Sequence
- ATGCCCAGTGAGGCGTCGTCGTGCGGGCCGGGCGCGGGCTGCCACGTGCGCGTGCGCAGACCTCAAGAAGGCATGGGAGGAGGAGGAGGTGGAGGCACCAACTCCGTGTACGGCCGCTGCTCCTACCCGACTGCTGGCTCACCCTACTTCAACGGAGACAACCTCACGCAGACACAGATATGGGCTTCCAGTGCAGGAGGCTCCCCTAACTACGGGTCAGGCGCGGTGCTCGAGGAGTACAGCGATGCGGGCGAGGGCGAGACGAGCGTCGGCACGCTGCCTGCCTTCAGCCGCTTCGCGCCAGCCTTTGCCACGGTGTCCCGGCCTTCCATCGTATACGGCGCCAGCACTCTGGCTTCCAACGCTTATGCACAAACTGAGATGTGGACTATCAATGGCCGACGACCGCACGTCTCTGCCGCCGCCAGCCTCGCTTCGATCGAATTGTCGGAGGGCGGCCGCGAGTGCGTGAACTGCGGGGCCATCCACACGCCGCTGTGGCGCCGCGACTACACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACCAAGATGAACGGCATAAACCGGCCGCTGAAGCAACCGCGGCGGCTGGTACGTCAGCGGCACGCGGCTCACGCGCTGGCGCCCGCTCCCGACATGGGTACCAAACGGCAGGGTGTGTGCTCCAACTGCGAGACCACCATCACGACCCTGTGGCGTCGCAACTTGGTCGGGGAGAACGTGTGCAACGCTTGCGGCCTCTACTTCAAGCTACACGGCGTCAACCGCCCCAAAAACATGAAGAAGGACTCCATACAGacaaGAAAACGAAAATCCAAAAATAATTCGAAAACAGAGCGCAGCATAAACAAGAACCCTGTCCGGGCGACCCTGAACGTCGGGACCGCGGAGTTAGAGAACATGCTGGACATGGGCGTCGCGGGCGGCAGCGGCGGCGCGGGTGGAGCGGGCGGCGCCGCACGCGGGGCCCGCTCGCTCGGCTACTACGTGCCCCCGCACCCCGTGAAGCTGGAGGAGCCAGCGCACGCGCACACGCAGCCCTACTACGAGGACGAGTACCGGCGCGCTGAGCCCCAGCAGCGCCTCGAACGCTCCGCCGTGGTGACGAACGGCAGCTGA
- Protein Sequence
- MPSEASSCGPGAGCHVRVRRPQEGMGGGGGGGTNSVYGRCSYPTAGSPYFNGDNLTQTQIWASSAGGSPNYGSGAVLEEYSDAGEGETSVGTLPAFSRFAPAFATVSRPSIVYGASTLASNAYAQTEMWTINGRRPHVSAAASLASIELSEGGRECVNCGAIHTPLWRRDYTGHYLCNACGLYTKMNGINRPLKQPRRLVRQRHAAHALAPAPDMGTKRQGVCSNCETTITTLWRRNLVGENVCNACGLYFKLHGVNRPKNMKKDSIQTRKRKSKNNSKTERSINKNPVRATLNVGTAELENMLDMGVAGGSGGAGGAGGAARGARSLGYYVPPHPVKLEEPAHAHTQPYYEDEYRRAEPQQRLERSAVVTNGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -