Basic Information

Insect: Dircenna loreta
Gene Symbol: -
Assembly: GCA_963555665.1
Location: OY743091.1:1489868-1494303[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00052 0.045 14.9 2.6 1 23 227 249 227 249 0.97

2 10 2.9 2.5e+02 3.1 0.0 3 23 276 297 274 297 0.92

3 10 0.028 2.5 9.4 1.1 3 23 320 340 318 340 0.91

4 10 0.081 7 8.0 1.6 2 23 345 366 344 366 0.96

5 10 6.8e-06 0.00059 20.8 1.7 1 23 373 396 373 396 0.96

6 10 0.088 7.6 7.9 0.8 1 20 402 421 402 425 0.76

7 10 0.00014 0.012 16.7 1.8 1 23 431 454 431 454 0.97

8 10 6.1e-05 0.0053 17.8 1.5 1 23 460 482 460 482 0.98

9 10 3.9e-07 3.3e-05 24.7 0.7 1 23 488 510 488 510 0.98

10 10 2e-06 0.00017 22.5 1.4 1 23 516 539 516 539 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00052	0.045	14.9	2.6	1	23	227	249	227	249	0.97
2	10	2.9	2.5e+02	3.1	0.0	3	23	276	297	274	297	0.92
3	10	0.028	2.5	9.4	1.1	3	23	320	340	318	340	0.91
4	10	0.081	7	8.0	1.6	2	23	345	366	344	366	0.96
5	10	6.8e-06	0.00059	20.8	1.7	1	23	373	396	373	396	0.96
6	10	0.088	7.6	7.9	0.8	1	20	402	421	402	425	0.76
7	10	0.00014	0.012	16.7	1.8	1	23	431	454	431	454	0.97
8	10	6.1e-05	0.0053	17.8	1.5	1	23	460	482	460	482	0.98
9	10	3.9e-07	3.3e-05	24.7	0.7	1	23	488	510	488	510	0.98
10	10	2e-06	0.00017	22.5	1.4	1	23	516	539	516	539	0.98

Sequence Information

Coding Sequence: atgagTGTAAATACTCGGAAAGGGCCAATTTATGACCCAGGATTGTGTAGGTGTTGTGGCgcgataaaaaaatgtcgttTATTGAATATCGAGTACGAATGGCAGGGACAGAAAGAAGTTTATTCTGACATATTTGTAGATAGTTTTGGTTTATTgCTTTCGCATCTGGATGGAGAAGCAGAAGAGCGTCTGATCTGTGCCACATGTGTCTCTCGGCTCAGAGAGGCGAGCTGCTTCCGACAGCAGGTATTACAGTGTGAGGAGAGGCTGTTACGTACCAAGCTGCAATGTGAAGGAGACAATCAGATGAATGATTTCAAACCTGagacaaatataaagaatgaatACTCACTCACTCATTTAGATAATGATACAGAGCACATTGATAATGacATAGATCATATTACACCAGAAACAGCAAAATCGAAACGGAAGTCATTGAGACAAAagttaaagaaacaaaaagtagAGAATGATGATGAAATAGAAACAAGAGAGttgttatttaatgtacatagAGTTAGtgagaaattaaaagaattggAGAACATTGAGCTTCCGCAACAGTCAATTCAACCAAAGAACGGCTTTAAAACTGAGAATCCCAAACCTTTCAACAATATTGTTACTATTATTGAGAATTCCTTCGCCTGTCCCTTTGATACGTCATTCAGTGATTACTTCTGTGTGTATTGCAGACATGTGTTCACTGACCCTAACAAACTACGAGAGCATACCCTCACCCACGACCCATTAACCTTCAAGGAGGTTTTATCAAATAGTTCCGGTAACAAAAAAGTCCAAATCGATATATTCAGGATAGACTGTAGATTGTGTCCCCagattataaatgatttgGAAACATTCACagatcatttaataaatgtacatgaaaagaatttaaatttgggTTCAAATGAATTTCTCAAGTTCAGACTGACGTCTGGTTCATTGGTTTGCATCGAGTGTAACAGcagtttcagtttttttcATGCTCTGAAAAAGCATATGGCGGAACATTTTGGTACCTGCATATGTGATGTCTGCGGGGCTCATTATTTTGAAGAACGTATGCTGGTGCTCCACCAGAAGACTCATCGGAGGATTGAAGAATGCTATACTTGCAAAGATTGCGGGAAGTCATTCAAATCCAAATACTCGAGATACATTCATATAGCCAGACTCCACAAAAAGGAGGCGGCATATCAATGCAGTAAATGCGATGAGGTATTCTTTTCGTATACAATACGGTATCGGCATATGATAGATGTTCATGGGGAGGAGAGGATGTTCCAATGCGAGCAGTGTGACCGGGCGTATGATAGTAGGAAATCACTGCGGGAACACAACAGGCgatttcatttgaaaatattaaagcacCAGTGTGATTTGTGCGACAAAAGATTCTATCTACCGTCTAGGTTGAAGGAACATATGGCAAGTCACACCGGGGAGAGGAATTTTAGATGTGAATACTGTGGGAAGAGTTACCCAAGACTACGGGGCCTTAAAGTTCACATGCAGTCTCATAGTAgcgagaaaaaatataaatgtttgatgTGCAATGCCTCATTCACAcagaatgttaatttaaagaatcatATCAAAAGACAGCATGAGAGAGAGGAGAGTTATCATGAATAG
Protein Sequence: MSVNTRKGPIYDPGLCRCCGAIKKCRLLNIEYEWQGQKEVYSDIFVDSFGLLLSHLDGEAEERLICATCVSRLREASCFRQQVLQCEERLLRTKLQCEGDNQMNDFKPETNIKNEYSLTHLDNDTEHIDNDIDHITPETAKSKRKSLRQKLKKQKVENDDEIETRELLFNVHRVSEKLKELENIELPQQSIQPKNGFKTENPKPFNNIVTIIENSFACPFDTSFSDYFCVYCRHVFTDPNKLREHTLTHDPLTFKEVLSNSSGNKKVQIDIFRIDCRLCPQIINDLETFTDHLINVHEKNLNLGSNEFLKFRLTSGSLVCIECNSSFSFFHALKKHMAEHFGTCICDVCGAHYFEERMLVLHQKTHRRIEECYTCKDCGKSFKSKYSRYIHIARLHKKEAAYQCSKCDEVFFSYTIRYRHMIDVHGEERMFQCEQCDRAYDSRKSLREHNRRFHLKILKHQCDLCDKRFYLPSRLKEHMASHTGERNFRCEYCGKSYPRLRGLKVHMQSHSSEKKYKCLMCNASFTQNVNLKNHIKRQHEREESYHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842936;
90% Identity: iTF_01034895;
80% Identity: -