Basic Information

Insect: Dircenna loreta
Gene Symbol: Znf296
Assembly: GCA_963555665.1
Location: OY743092.1:10851956-10859949[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.2 1.9e+02 3.5 0.2 3 17 60 74 58 75 0.90

2 12 0.00023 0.02 16.0 0.0 2 19 180 197 179 198 0.95

3 12 0.76 65 4.9 0.2 2 23 242 263 241 263 0.94

4 12 0.0029 0.25 12.5 0.8 2 21 365 384 364 385 0.92

5 12 0.00036 0.031 15.4 0.5 1 23 393 416 393 416 0.96

6 12 4.3e-06 0.00037 21.4 3.7 1 23 434 456 434 456 0.99

7 12 2.9e-07 2.5e-05 25.1 2.9 1 23 463 485 463 485 0.98

8 12 1.1e-07 9.7e-06 26.4 2.3 3 23 497 517 495 517 0.96

9 12 2.6e-05 0.0023 19.0 3.2 1 23 523 545 523 545 0.99

10 12 4.7e-07 4e-05 24.4 1.5 2 23 552 573 551 573 0.96

11 12 1.2e-07 1.1e-05 26.3 0.8 1 23 579 601 579 601 0.99

12 12 0.0096 0.83 10.9 0.4 1 23 607 629 607 629 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.2	1.9e+02	3.5	0.2	3	17	60	74	58	75	0.90
2	12	0.00023	0.02	16.0	0.0	2	19	180	197	179	198	0.95
3	12	0.76	65	4.9	0.2	2	23	242	263	241	263	0.94
4	12	0.0029	0.25	12.5	0.8	2	21	365	384	364	385	0.92
5	12	0.00036	0.031	15.4	0.5	1	23	393	416	393	416	0.96
6	12	4.3e-06	0.00037	21.4	3.7	1	23	434	456	434	456	0.99
7	12	2.9e-07	2.5e-05	25.1	2.9	1	23	463	485	463	485	0.98
8	12	1.1e-07	9.7e-06	26.4	2.3	3	23	497	517	495	517	0.96
9	12	2.6e-05	0.0023	19.0	3.2	1	23	523	545	523	545	0.99
10	12	4.7e-07	4e-05	24.4	1.5	2	23	552	573	551	573	0.96
11	12	1.2e-07	1.1e-05	26.3	0.8	1	23	579	601	579	601	0.99
12	12	0.0096	0.83	10.9	0.4	1	23	607	629	607	629	0.98

Sequence Information

Coding Sequence: atggctTTAAAAAgctctgaaataaaaattgaatatttatgcCGGACTTGTTTGTCCAAAGAAATTGATTTACTCTCAGTGTTCGAAGTATGCCTCGGAACTGTTtcctttgataatataattgctTCGGTTACTGGCGTAAAGATTGAAGAAGGCGATGGATTACCTGCAACTATTTGCAAGGACTGTAAGGAGAAGGCGACCAGTgcctataattttaaaattcgctCAGAAGAGTCTAACATAGTGCTCTgtgatttattgaaaactgGAAAATATGACCAGAATAAAAATCATCATTCCATTTTACAGcaAAATGCTGTAGCTGTGAAAACAGAGCAGTATACCAATGACAATCATGATGATTATATAGATTTGGATCTCACTCTAGCTCTTACTAATGACCAAgaacattacaataatgtagATGATATAAAAGATGAAATTGAGAACCAGTCCAAGGTCATCACACAGGGTGCtcatgaaaatgaaaatgaagatGAAGACACAAAggATTCAAATGAAAAGGAGAGTACATATTGTCCAGTGTGCGGTACAAGCTTCTCAGATGCTGTTGGTCTCACAAAGCATGCCTGGGATAAGCACGCTGATCTCATGGGTCCAAAGAAACGTGGACGACCCAAGAAACTACTCACAAGTaCAATATTAACTAAACTATCAGAAAATGGCATTAACCTGAAAAGTCTACCGgaccaaaaacaaaaatgtgcCTTTTGTAAAGATGATTTTAAGGCTAAAGATGATTTAGTGTTACACATGGTCGAGCACAGAGATGTGAAGCTGTTAAAATGTCTGGTGtgcaagaaaatatatctcgCTAAGAAAGATTTTGATCTACACAATTGTGGTCAAGGACAAGAAATGAACAATGTTAAAcaaggGGGTCAGCTAGATACTGAGACATGTGAAaagttcaaattatttacagaaatacTACTACaggaaatattattgacaaataGTGATGCTGATCAGCCCAGTGTAGTGGAAGTGTGTGAAGCGTGTGGAGGAGTCTTGACTGATTTGGAACTTCAAACACATAGAGACCAGGAACACCCCGAGCTCTCTTTACGATGCCACCTGTGTGACAAGGTGTTCGCGACCCTCAAGACCGCCAGTCGTCATCGTTCCACGTGTTCGCTGGTGGAGCGTCTGTTCTCGTGCGCGTCGTGCGGGCTGAGGTTCGCGCACGAGGTCACCCTCAACAAGCACATCCTGCGCGCGCACGCCGGGGAGAGCGTCTCCGTGCGGTTCATGGACCGAGGAGCTCCGCCGCAGTACAAGTGTGATACTTGCAACAGACGGTTTTATaggAAGGACCTTCTGACGAAACATACTAAAGTACACAAAAACTCTGATAAGTTCTTCGAGTGTGACATCTGTAACAAGAAATTCCACAGAAGAGATAATCTTagAGCCCACGTTCGTACCCATGGCACTGGAAGTAGCAACGGGTCCAGTTGTCTGTGCCTGTACTGCGGGAGGAGCTTCTCCAACTCCTCAAATCTCATCGTCCATATGAGACGACATACTGGAGAGAAACCTTATAAGTGCGACTTTTGTGGGAAAGGGTTCCCTCGCTCGTCAGACTTGCAGTGTCACCGACGCTCACACACGGGGGAGAAACCATGTATATGTGGAGTGTGCGGAAAAGcaTTCTCCCGCAGTAACAAGTTGTCTCGCCATATGCGCGTACACACGGGCGTCAAACCGTACAAGTGTCCGTACTGCGAGAAGGCATTCTCTCAGAGCAACGATCTCACGCTTCACGTGCGGCGACACACGGGCGACAAGCCCTACGTGTGCGAATTGTGTGGAGACCGCTTTATACAgGGTACGGCCCTCCACAACCACCGGCGCGCTCACGGTCACTTCGCCCCCCCCGCGACACAGCAGGCGCTTCCCCCCCTCGTGTACACCGTGCAGACTGTGACACAGACACAATGA
Protein Sequence: MALKSSEIKIEYLCRTCLSKEIDLLSVFEVCLGTVSFDNIIASVTGVKIEEGDGLPATICKDCKEKATSAYNFKIRSEESNIVLCDLLKTGKYDQNKNHHSILQQNAVAVKTEQYTNDNHDDYIDLDLTLALTNDQEHYNNVDDIKDEIENQSKVITQGAHENENEDEDTKDSNEKESTYCPVCGTSFSDAVGLTKHAWDKHADLMGPKKRGRPKKLLTSTILTKLSENGINLKSLPDQKQKCAFCKDDFKAKDDLVLHMVEHRDVKLLKCLVCKKIYLAKKDFDLHNCGQGQEMNNVKQGGQLDTETCEKFKLFTEILLQEILLTNSDADQPSVVEVCEACGGVLTDLELQTHRDQEHPELSLRCHLCDKVFATLKTASRHRSTCSLVERLFSCASCGLRFAHEVTLNKHILRAHAGESVSVRFMDRGAPPQYKCDTCNRRFYRKDLLTKHTKVHKNSDKFFECDICNKKFHRRDNLRAHVRTHGTGSSNGSSCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICGVCGKAFSRSNKLSRHMRVHTGVKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQGTALHNHRRAHGHFAPPATQQALPPLVYTVQTVTQTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01033934;
90% Identity: iTF_01033934;
80% Identity: -