Basic Information

Insect: Dircenna loreta
Gene Symbol: -
Assembly: GCA_963555665.1
Location: OY743091.1:1559236-1574909[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.12 10 7.4 0.1 1 20 207 226 207 228 0.94

2 28 0.012 1.1 10.5 0.6 2 23 256 278 255 278 0.93

3 28 3 2.6e+02 3.0 3.3 1 23 301 323 301 323 0.97

4 28 0.0021 0.19 12.9 0.8 1 23 327 349 327 349 0.98

5 28 0.022 1.9 9.8 1.2 1 23 354 377 354 377 0.92

6 28 0.047 4.1 8.7 0.4 2 23 385 407 384 407 0.93

7 28 0.00082 0.071 14.2 6.1 1 23 414 436 414 437 0.95

8 28 0.0077 0.66 11.2 1.2 1 23 443 465 443 465 0.95

9 28 2e-06 0.00017 22.5 2.2 2 23 472 493 471 493 0.96

10 28 7.5e-06 0.00065 20.7 2.2 1 23 499 521 499 521 0.98

11 28 0.09 7.8 7.8 1.5 1 23 606 629 606 629 0.96

12 28 0.7 60 5.0 0.2 2 23 655 677 654 677 0.91

13 28 0.078 6.7 8.0 4.7 3 23 702 722 700 722 0.96

14 28 0.0055 0.47 11.6 0.3 1 23 726 748 726 748 0.97

15 28 0.059 5.1 8.4 0.3 1 23 756 779 756 779 0.90

16 28 0.023 2 9.7 0.9 3 23 788 809 786 809 0.94

17 28 4.4e-05 0.0038 18.2 0.7 2 23 815 837 814 837 0.95

18 28 0.96 83 4.6 0.7 1 20 843 862 843 866 0.84

19 28 0.013 1.1 10.5 0.0 1 23 965 988 965 988 0.94

20 28 0.0084 0.73 11.1 0.7 1 23 1059 1081 1059 1081 0.96

21 28 0.00012 0.011 16.8 0.2 1 23 1085 1107 1085 1107 0.98

22 28 0.089 7.7 7.8 1.1 1 23 1112 1135 1112 1135 0.90

23 28 0.0064 0.55 11.4 1.8 2 23 1143 1165 1142 1165 0.95

24 28 4.3e-05 0.0037 18.3 0.8 2 23 1173 1195 1172 1195 0.97

25 28 0.0068 0.59 11.3 0.4 1 21 1200 1220 1200 1221 0.94

26 28 0.041 3.6 8.9 1.1 1 23 1224 1247 1224 1247 0.96

27 28 2.4e-05 0.0021 19.1 1.4 1 23 1359 1381 1359 1381 0.98

28 28 0.0011 0.096 13.8 3.5 1 23 1387 1410 1387 1410 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.12	10	7.4	0.1	1	20	207	226	207	228	0.94
2	28	0.012	1.1	10.5	0.6	2	23	256	278	255	278	0.93
3	28	3	2.6e+02	3.0	3.3	1	23	301	323	301	323	0.97
4	28	0.0021	0.19	12.9	0.8	1	23	327	349	327	349	0.98
5	28	0.022	1.9	9.8	1.2	1	23	354	377	354	377	0.92
6	28	0.047	4.1	8.7	0.4	2	23	385	407	384	407	0.93
7	28	0.00082	0.071	14.2	6.1	1	23	414	436	414	437	0.95
8	28	0.0077	0.66	11.2	1.2	1	23	443	465	443	465	0.95
9	28	2e-06	0.00017	22.5	2.2	2	23	472	493	471	493	0.96
10	28	7.5e-06	0.00065	20.7	2.2	1	23	499	521	499	521	0.98
11	28	0.09	7.8	7.8	1.5	1	23	606	629	606	629	0.96
12	28	0.7	60	5.0	0.2	2	23	655	677	654	677	0.91
13	28	0.078	6.7	8.0	4.7	3	23	702	722	700	722	0.96
14	28	0.0055	0.47	11.6	0.3	1	23	726	748	726	748	0.97
15	28	0.059	5.1	8.4	0.3	1	23	756	779	756	779	0.90
16	28	0.023	2	9.7	0.9	3	23	788	809	786	809	0.94
17	28	4.4e-05	0.0038	18.2	0.7	2	23	815	837	814	837	0.95
18	28	0.96	83	4.6	0.7	1	20	843	862	843	866	0.84
19	28	0.013	1.1	10.5	0.0	1	23	965	988	965	988	0.94
20	28	0.0084	0.73	11.1	0.7	1	23	1059	1081	1059	1081	0.96
21	28	0.00012	0.011	16.8	0.2	1	23	1085	1107	1085	1107	0.98
22	28	0.089	7.7	7.8	1.1	1	23	1112	1135	1112	1135	0.90
23	28	0.0064	0.55	11.4	1.8	2	23	1143	1165	1142	1165	0.95
24	28	4.3e-05	0.0037	18.3	0.8	2	23	1173	1195	1172	1195	0.97
25	28	0.0068	0.59	11.3	0.4	1	21	1200	1220	1200	1221	0.94
26	28	0.041	3.6	8.9	1.1	1	23	1224	1247	1224	1247	0.96
27	28	2.4e-05	0.0021	19.1	1.4	1	23	1359	1381	1359	1381	0.98
28	28	0.0011	0.096	13.8	3.5	1	23	1387	1410	1387	1410	0.97

Sequence Information

Coding Sequence: ATGGAGGAAAACACTAGTGACGGTATGTGCCGGTGTTGTGCGACAGAAGGTAGTTTTAAGGACTTTCAAACAACATACCATTGGATGGGTGTAGAAGAAATTTATTCGGATATGTTAAAagattgtttcaatatttctCTTGCCTCGTCAGAAGCAATTAACAATGGTGGTATATGTGAGGTGTGTGTCACTCAGCTCCGTAATGCATTCAACTTTAAACGGCAAGTCCAGCTCACAGAAGAACAGTTTAAGAAAAAGGTTCGGGAATcggtttttaaatCAGGCACAATTAAGCTGGAGATGTCTCAGGATGATGTTGAGTCGGACAATGTTGCATCTGACAACCTGTCTGATGCCGACTACGAAGTGCCAATAAAAGAAGAGAAGCTGGAGGACAAACCCAAGAAGCGTCAAGCCAAGGCCTCTACGTCCAAGGCGAAGAAGCCCAAGACTGAAGGGGAGACCTCAAAACGAACGGACGGCGAACCCAAACgcaagaaaaagaaaaagaaatcgGAGGTAAGCGCAACACCAGAGCGCATTGAACACAGAGTCAACTTGACTGCCATACTCCAGTTCTCCAACGCGAGTCCCTTCAGGGATAAGACCATGAAAGGCTTCTCGTGCCTCTACTGTGCCAAAAGTTTTCAGGGCATTGATGAACTCCGAGCCCACACTGCTCAGCAGAAGGAAAAGGATAAAATTAACGCAATGCTGGACTACAAACTAAGTTATAACCCTATCAAACTTGACATAACAAACCTCCAATGCACCGTTTGCCATAAAGACTTGAAAGATCTAAATGAACTCAAAGAACATTTGGTCTCCGTTCACAATAAAACTATACACAAGAATATCAAAGATACGATCCTACCCTTCAGACTGGAGAACGGTCAAAATTTTACATGCGTTATCTGTTCGGTTGTTCACATTTCGTTTAAGAACCTTTATCATCACATGAGTAGCCATTATCGTAATTATTGCTGTAAAAAATGCGGTGCCGGTTACATCACTATAGCAGCGTTGAGAAAACACGGTAAGACGCACTACCAGGGACACTTTCCTTGCGATTTCTGTGATAAATCTTACACTTCACTCACTAAGAAACGGAACCACGAAAAGGGTGTGCACACGGGTGGTTGGTTGAGGAACAAGTGTCCTCACTGCCCAGAGATCTTTGTGAGCTACTACGACCGGAGCGAGCACCTGGTTAAAGTTCACAACGAAGCACCCGTAGTTTATCCTTGTAATGCCTGCAATAAGACGTACAAAAAGAAATTCGAACTCAATCGACATATAAAACACCATCATCTTCAACAGAGAAGCTTCTTATGTGATAAATGCAACGCAAAGTTCTTCTCAAAGCGGGGTCTCGTGGATCACATGACACGGCACACGGGCTCCGAAATATGCTCCTGCGATATATGTGGAAAGGCATTTTCGAGGATGAGAACCTTGAGGGAACACATGAGAATGCACGAGGACGATAAACGCTTCCAATGCGAAGTCTGCAAGAAGACCTTTATGCAAAAGAGTAGTTTGAAGAGCCACGTCAAACTCCATCAAGACGATCtggatatatttaaagagtTCGATGATGTAAAGCATCTTATCGATGACAGGGAGATGACTCTCAAACAGATCGCCGCTGAAAACAAAGTGAGGAAACCGACAATAAAGGAAGAAAGCGGAGAGACTAGCAATGTATTGTACCGCGAAAAGCATCTGCGAGAGATTCAGAAGCAGGGGCACAATCTCCTTACTcttcttaaatattctaacGCGACCCCCTTCAAGGACAGAAACGACGCCGGCTATATGTGCGCGTTCTGCTATAAAAACTTTCCCGATCCAAATATTCTAAGACATCACACTCGCAACGACCATGTAACAGAAAAACGGACATATAAAGCCTTTTCGCTCCTTGGTGGTTTTGTTGCGTTTTTGGACATAGtcgatttaaaatgtacaatttgTGAAAAGTCTATGGATAGCATTAAACTTCTAAGCGAGCATCTAGTCAAAGAACACGAtaagacatattatttaaatgtaacggATTATTTTCAACCCTTCAAGCTCACAAAGGAGAAGCAGATACACTGCTGCCTGTGTCCTGAAAGCTTCCACAATATGAGGTTGCTAATGCAACATATGAACATACATTATCGTAACTTTATTTGTTCCGCCTGTGGTGCGGGATTTGTGAACAAATATCGCCTGAGCAGGCACGAGAAATCTCATCTGAAGAAGAAGAAGTCTGACTTTGTCTGTCGATACTGTGGTCAAGTCTTCGATGCTGAATCCAAGAAGAAAAGCCATGTTAATGCTGAGCATAAGGGCATCGAAGGCCAGAGTATATGCCAAATTTGTAAAGCTagatttaagaattattaccAGAAAACGAGGCATGTGATGCAAGTCCACAAGGTGGAAGGAATTAAATGTGACTTGTGTGATAAAAGATTTAACTTGAAGTCTAATTTGATGCTGCACCGGAGGGGGGTACATTTAAATGAGAGGCCCTACGAATGTTCGGTTTGTAGCATGGGTTTTCTAACAAAACGTCACATGCTCACACACTACGTCGCCGCACACACAAATGAACGGaactataaatGTGTCGAGTctcaaacaacatttattgaaatcgTAATCAAACAAGAACCGATGTCTGACTCGGAACAACCCGAAGATTCTAAACCGGATACAGTTTTCAATATAGAACCGGATAAAGTTGTAAAGAAAGATCATAAGGATCCAAGGAAAAGTGCTGCCGACCGGAAATCTAAAAAGGatcaaattattgaaatggaaaaacatttaaagaacATTAGCACTATTCTGCTTCACACGAACGCAACCCCGATTAGATATCACGATGGCGCGAATTATGTTTGTGCTCTTTGCCCGGAAACGTACCCTCTGCCTTCGGATCTCAAACTTCACGTATTAGAGGAACATGACGAAATAGATAAAACCTCTTTCATGGAAGGTCATAGACTGACTTCCTACGTTGTGAAACTAGACATAACGAATTTGCGTTGTCTTCTTTGCCGCAGTGATATTGAAAGTTTCGATCCGCTGTTCGATCATCTCAAGTCGGTTCACGGAAAGGAAATGCACACGGATATACCGAACCACATTTTACCTTTCCGGTTCGTTGGTAATGGTTTTGATTGTGTTGTCTGTCCTAGGTCGTTTGAACATTTCAAACTCGTTCAGGAACATATGACTGTGCATTACAGAAATTACATCTGCGAAATATGCAACGCGCCTTTTGTCAATAAGAGAACTCTTCAAAATCATGCGAACAGACACAAGAAAGGCGATTTTCCCTGCAGTCAGTGTCCTAAAATCTTTGACACGAATCGAAAGAAATTGAATCATGAGAAATTTGTTCACGCTGGTGATTATAAGCGAAAAAAGTGTCCATATTGTCAGGAAAAATTCACTAATTATGCTAAGAAACGATCTCATATGGTTAAGGAGCATGGAGCTGAGCCGCTATCTGTTAAATGTGATATTTGCAATAAGGTTTTTAGTACTCGAGCTAGGTTAAGAGGTCACACCCGAAGAGACCACATGGAGTGCCAACATGCCTGTAATAATTGTGAAATGAGGTTTTATACTCAGCTGGAATTGGTTAAACATATGAATGATATCGGCTACAGCTGCACGTTTTGTTCTGATCATTACCCTAACCCTGCAGACCTCAAGAAACATACACTGGTGAATCATGATGAGGAAGCCGTTGTCAAAGTGGTGAAAGGCATCCGAATGTACACTGTGAAGTTAGATATTACCGATCTCCAGTGTATTATATGTGACACTGATATGGggtCAAGAGACACCATATCCTTCGTATTCGAAGACACAAACGTTATACCTAAAATAGAGGAAGATCACAATGAAGATATAACATATGAAAAAGGTGTGGAGTTACAGATGCATCGAACAAATATTCATCAGATATTGACGAACTCTAACGCGACACCCATCCGTTGTCATAAAGGAATCGGTTATGCTTGCAGTTTCTGTATCAAACAATTTCCTGATCCAGGGTTAAGGAAATTTGTCTGTGAAATATGTCACAAGGCTTACGGGCGTCGGAAAACTTTGCGTGAACACTTACGAATTCACACAGATGATAGGAGATTTAAGTGTGAATACTGCAGTCAGACGTTCGTGCAAAAGTGTAGCTGGAGAGGTCACATGCGAGCTAAACATGGTCAAATAGtgtaa
Protein Sequence: MEENTSDGMCRCCATEGSFKDFQTTYHWMGVEEIYSDMLKDCFNISLASSEAINNGGICEVCVTQLRNAFNFKRQVQLTEEQFKKKVRESVFKSGTIKLEMSQDDVESDNVASDNLSDADYEVPIKEEKLEDKPKKRQAKASTSKAKKPKTEGETSKRTDGEPKRKKKKKKSEVSATPERIEHRVNLTAILQFSNASPFRDKTMKGFSCLYCAKSFQGIDELRAHTAQQKEKDKINAMLDYKLSYNPIKLDITNLQCTVCHKDLKDLNELKEHLVSVHNKTIHKNIKDTILPFRLENGQNFTCVICSVVHISFKNLYHHMSSHYRNYCCKKCGAGYITIAALRKHGKTHYQGHFPCDFCDKSYTSLTKKRNHEKGVHTGGWLRNKCPHCPEIFVSYYDRSEHLVKVHNEAPVVYPCNACNKTYKKKFELNRHIKHHHLQQRSFLCDKCNAKFFSKRGLVDHMTRHTGSEICSCDICGKAFSRMRTLREHMRMHEDDKRFQCEVCKKTFMQKSSLKSHVKLHQDDLDIFKEFDDVKHLIDDREMTLKQIAAENKVRKPTIKEESGETSNVLYREKHLREIQKQGHNLLTLLKYSNATPFKDRNDAGYMCAFCYKNFPDPNILRHHTRNDHVTEKRTYKAFSLLGGFVAFLDIVDLKCTICEKSMDSIKLLSEHLVKEHDKTYYLNVTDYFQPFKLTKEKQIHCCLCPESFHNMRLLMQHMNIHYRNFICSACGAGFVNKYRLSRHEKSHLKKKKSDFVCRYCGQVFDAESKKKSHVNAEHKGIEGQSICQICKARFKNYYQKTRHVMQVHKVEGIKCDLCDKRFNLKSNLMLHRRGVHLNERPYECSVCSMGFLTKRHMLTHYVAAHTNERNYKCVESQTTFIEIVIKQEPMSDSEQPEDSKPDTVFNIEPDKVVKKDHKDPRKSAADRKSKKDQIIEMEKHLKNISTILLHTNATPIRYHDGANYVCALCPETYPLPSDLKLHVLEEHDEIDKTSFMEGHRLTSYVVKLDITNLRCLLCRSDIESFDPLFDHLKSVHGKEMHTDIPNHILPFRFVGNGFDCVVCPRSFEHFKLVQEHMTVHYRNYICEICNAPFVNKRTLQNHANRHKKGDFPCSQCPKIFDTNRKKLNHEKFVHAGDYKRKKCPYCQEKFTNYAKKRSHMVKEHGAEPLSVKCDICNKVFSTRARLRGHTRRDHMECQHACNNCEMRFYTQLELVKHMNDIGYSCTFCSDHYPNPADLKKHTLVNHDEEAVVKVVKGIRMYTVKLDITDLQCIICDTDMGSRDTISFVFEDTNVIPKIEEDHNEDITYEKGVELQMHRTNIHQILTNSNATPIRCHKGIGYACSFCIKQFPDPGLRKFVCEICHKAYGRRKTLREHLRIHTDDRRFKCEYCSQTFVQKCSWRGHMRAKHGQIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -