Dlor011249.2
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- rcor2
- Assembly
- GCA_963555665.1
- Location
- OY743093.1:988446-992775[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 1.6e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 3e-11 3.8e-08 33.9 0.0 3 46 388 431 386 431 0.96
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAGAGAAATAATGATGTTCGAAACGGCAAGCGTTCGAGAGGGCCAAGCCCGAATGGGCATGGTAGTCCTGATTCCAGCTCCGAGGATGAGAATGTAGTGCCATTTGCAGCTGAAAAAATAAGGGTTGGTCGAGATTATCAGGCTATATATCCAGAGTTGGAACCTCTGGAGGCTAGAAAACCTGATCAAATATCTGACAGAGCTCTATTAGTTTGGTCACCAACATGTGATATATCAGATAGCAAATtggaTGAGTACATAACTACagctaaagaaaaatatggatACAATGGGGAACAAGCACTTGGAATGTTGTTCTGGCACAAACATGATCTTAACAGGGCATCACTGGACCTTGCAAACTTCACACCTTTTCCTGATGAATGGACAGTGGAAGACAAAGTGTTGTTTGAACAAGCATTCCAGTTTCATGGCAAAAGCTTTCATAGAATACGACAAATGTTGCCAGATAAATCAATTGCATCATTAGTGAAATACTATTACTCATGGAAAAAGACAAGAGCCCGTACGTCTTTAATGGATGTTGTAAGTGAGGGCCGCACTGCTGCAGGATCTGGAACAGGGAAACGTGACTCTGGAGCGGGGTCTGAGCCGGGTGGCTCAGATAAAGATTCCGACAATGACGAAAAGAGGTGGACGTTACACCGCGGAGTAGTGCGtggcggcgcgggcggcggcTCGCGCGCCGGCCTCGAGGGCGATGGCGGCGAAGGGGGCAAGTGGTGCACCGTCTGCGGCATTCTGTGCTCCTACACCACGCAGCACAACTCGCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACGGGCAGTATGAGGCCGCTGTGCGGTCCGTCGGGGCGGCGGCCCGGCAAACAGCAGCGGTACAAGCACCGCCTGCCGCGCGGCATTTACATCAACCACGACGATCTGGTTGCCATGGCGACGGGGCCACAACCCGGCGACCGCAACCACAACCACAACCAGGGCGAGGCCGTGCTCAGAGCGATGGACAGAGAGATTATCTCGCTAAAGAGACAAGTTCAACAAAACAAGCAGCAATTGAGTTCGTTGAAGCGTAAAGTTGGCGACGCGGGTGTGGAGGAACTCAGGCCCGGGGAACCACCGGCCAAGATCAATTCACGATGGACAAGTGACGAACTACTAATGGCCGTTACAGCAGTCAGAAAATATGgcAAAGATTTCCAAGCAATTGCAGAAACACTTGGCACAAAGACGGAATCACATATCCGTACATTCTTCATATCATACCGTCGCAGATATAACTTGGACGCTGTGCTCAGAGAACATGAAGCAGACAGACATAACGAAAATCATATACAATCAGgCACAACGAGCACCGAGTCAAATGACAACGATGTTGACAATAGTAGTTCCAAAAACGAAAGTAGCTCACCACAGACTAATGCTAAGGAGGAAAAGACGGAGGTAGACAGCGAGGGCGTAGCGATCGGAGCCTCCGCCGAGCAGGGCGGGCCGCCCACCACGCCGCCGAAACACAAGCACGCCAAGTGA
- Protein Sequence
- MVLAERNNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAIYPELEPLEARKPDQISDRALLVWSPTCDISDSKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRTAAGSGTGKRDSGAGSEPGGSDKDSDNDEKRWTLHRGVVRGGAGGGSRAGLEGDGGEGGKWCTVCGILCSYTTQHNSHKLCQACLVHARRTGSMRPLCGPSGRRPGKQQRYKHRLPRGIYINHDDLVAMATGPQPGDRNHNHNQGEAVLRAMDREIISLKRQVQQNKQQLSSLKRKVGDAGVEELRPGEPPAKINSRWTSDELLMAVTAVRKYGKDFQAIAETLGTKTESHIRTFFISYRRRYNLDAVLREHEADRHNENHIQSGTTSTESNDNDVDNSSSKNESSSPQTNAKEEKTEVDSEGVAIGASAEQGGPPTTPPKHKHAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00960115;
- 80% Identity
- -