Dlor011346.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dircenna loreta
Gene Symbol
-
Assembly
GCA_963555665.1
Location
OY743093.1:2170845-2173256[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 9.5e-06 25.9 0.0 2 45 13 55 12 55 0.91

Sequence Information

Coding Sequence
ATGCCGCCAATAAAAGGACAGATGTTTCGTTACTCTGAGGCTGATATGGAAGCCGCTATCTTAGAATGCAGACGAGGAGTTCCGACGTCAACTGCGGCAAAAAAATTTGGGGTACCTAGGGTAACTCTGCTGAATAAAGTAAAGGGTAAGACACCAATGAAACGAAAAATGGGAAGAACATGCTACATATCAGATGATACTGAAGCCTTGCTCGTAAAGTGGGCTAAAGCAATGGTGAAACAAGGATTCCCAATAGGCAAAGAGAATTTACAAGATAGtgtgaaaaaaattgttgatgatttgaatttagaaaCTCCTTTTAAAGATGGGAGGCCTGGTAAAAGATGGTATAGCAGTTTTTTAAAACGGCACCCAGAGCTTATCCCTAGACAGCCCCAAAATTTAACTTCATCCAGAGCTTCAGTCACAACAACACAGTTAAAGAATTGGTTTAAAGAAGTCAGCACCTATcttgaagaaaaaaattacacaaatattttggtTGAACCTCATCGAATTTTCAATATGGATGAgactgcattttttttaaatccgaAAGGAAACAAGGTACTAGCAGCTAAAGGCGAAAAATCGGTGTACCAGCAAGTTAACTCGGACGAAAAAGAATGTTTCACAGTTCTTTTAGGTGGCAATGCTGCTGGTCAAGTTCTACCGCCCatggttatttttaagtatttcagAATACCAAGAGAGTTAACCTTGTCTATTCCTGTAACTTGGGGTATTGGACGGTCCGACAGTGGTTGGATGACGATGGAGACATTTTTCGAATATATCtgcaatatatttgataaatggtTGAATGACAATGGTATTCAAAAACCAGTCATACTTTTTATGGATGGGCACACATCACACATGTCATACCACGTGAGCAAGTTTTGTTCACAAAATGggataatattaattgctcTCTTTCCTAATGCCACTCATCTCTTACAGCCAATGGATGTAGCTATTTTCAGAAGCTTAAAGGGTGCCTGGAAAACTGCTGTTCAGGCTTGGCGTTTAGAAAACATTGATTCCCCTGTTTTGAGAAAAGTTCATTTTTGTCCTTTGCTAAACAAAGTacttaaagaaacattatcaCCTGAGATGTTTCAAAACGGCTTTCGTAAGTGTGGACTCTCACCCTGGAATGCTGATGAAGTGTGCTGTGCATCACAACAACCAACAGATGAGTTCATGGCATTACAAAAACTGGCGAAAATTAAAGAACTGGAAATGGGTCTTAAATTTCTTGACAAATATATTGCTTCAGAAAAAATTGACGAAAACATTGgattgtttcaattttataaaaagattgaaGACCTACTAACAAACACTAAAGATGTCTTACCACCAACTTCTACATCAGAACAAGTTGTACAGAACAGTCCAACTCAAATATTACCACCGTTTAATATAGTCCCGAGTAGCGATCTATTGCCAATGCCATCCACATCACAAGTTACAACTTTGGATTTTCCGTTCCAATATTTACCCCTAAATGAAGACCCTAAAACTCCCAGCAAAGAAGTCCAAGAAAGCACTACTCAACATCTCGAAGCCACAATAAACACTGCATCATTGATAGAACCACCTACATCAAGTCATAATAGGCCACAAGaaagattttcaaataattcagATATGGTAGTACCTAGTCCATTTAAAAGAGCATTGTTTTGGCCAACTCctaaacaaaacttaaaagGAAGAAGGAAAGAAAAAGTGCCTTCTGTTGTGTCATCTTTGGAATGGCAAAGATACCATGAAAACAAAGAGAAGAAAAAGACTGAGTTAGAGGATGAGAAAAAAAGAAGAGCTgaggaaagaaaaaaaaagaaagaagagACTGAAAAAGCACGGAAAGTAAAGACTGATAAGAAgttattaaagaaaagtaaaaatgttataaaaaacaaacttaaaaagaCTGACTATAATAGCTCAACTACCGAAGAAGAATGGGTAGAATCTGGAGACAGTGTAAATGATATTTCTGATGAAGTCACTGATGAGGAAAACGAAGAACAAAGAAATGAGGAAGAAAGAAATGAGGACGAAAGAAATGAGGACGAAAGAAATGAGGacgaaagaaataaaaaagaaagaaatgaGGAAGAAAGTAGAATTAAGCAAGGTGACTATGTTATCGTTAAGTTTCCTGGCAAAAAGagatattacaaatatgtttgtattgtccAAAAAGTAACTAAAACAGAAATTGAAGTTATGGCAATGGTAGCATGTGATGAGTctaaaacagtatttaaagaaaatgataGGGATATCAGTGCTATAACTGAATCCCAAATAATTAAAGTCCTTGATGTACCAAATATGATTATAACAGGTGATAgaattaagtataaatttgATAGTTTCTTAGAGGTTGATggataa
Protein Sequence
MPPIKGQMFRYSEADMEAAILECRRGVPTSTAAKKFGVPRVTLLNKVKGKTPMKRKMGRTCYISDDTEALLVKWAKAMVKQGFPIGKENLQDSVKKIVDDLNLETPFKDGRPGKRWYSSFLKRHPELIPRQPQNLTSSRASVTTTQLKNWFKEVSTYLEEKNYTNILVEPHRIFNMDETAFFLNPKGNKVLAAKGEKSVYQQVNSDEKECFTVLLGGNAAGQVLPPMVIFKYFRIPRELTLSIPVTWGIGRSDSGWMTMETFFEYICNIFDKWLNDNGIQKPVILFMDGHTSHMSYHVSKFCSQNGIILIALFPNATHLLQPMDVAIFRSLKGAWKTAVQAWRLENIDSPVLRKVHFCPLLNKVLKETLSPEMFQNGFRKCGLSPWNADEVCCASQQPTDEFMALQKLAKIKELEMGLKFLDKYIASEKIDENIGLFQFYKKIEDLLTNTKDVLPPTSTSEQVVQNSPTQILPPFNIVPSSDLLPMPSTSQVTTLDFPFQYLPLNEDPKTPSKEVQESTTQHLEATINTASLIEPPTSSHNRPQERFSNNSDMVVPSPFKRALFWPTPKQNLKGRRKEKVPSVVSSLEWQRYHENKEKKKTELEDEKKRRAEERKKKKEETEKARKVKTDKKLLKKSKNVIKNKLKKTDYNSSTTEEEWVESGDSVNDISDEVTDEENEEQRNEEERNEDERNEDERNEDERNKKERNEEESRIKQGDYVIVKFPGKKRYYKYVCIVQKVTKTEIEVMAMVACDESKTVFKENDRDISAITESQIIKVLDVPNMIITGDRIKYKFDSFLEVDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00820001; iTF_00354019; iTF_01118229; iTF_01118230; iTF_00717693; iTF_00824676; iTF_00752008; iTF_01152055; iTF_00942765; iTF_00942764; iTF_01206493; iTF_01203981; iTF_00837438; iTF_00837437; iTF_00924576; iTF_01363040;
90% Identity
-
80% Identity
-