Dlor017385.1
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- -
- Assembly
- GCA_963555665.1
- Location
- OY743097.1:11070208-11070795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 8.8e-10 38.8 0.0 1 37 14 50 14 57 0.94 2 2 8.2 6.7e+03 -2.4 0.0 13 24 61 72 54 73 0.72
Sequence Information
- Coding Sequence
- ATGTTATCTCCATCTTCGAGGAAGAAACAAAAGACGTGGGACCCTGAAGAAATGAAAAAAGCGGTCGATGCGGTGAGGAATAAGCAGATAGGATATAAAAAAGCTGTTAAAATGTTTGGTGTACCCAGATCGACACTAAAACGGTTAGTGAACGATCCTCAAGAGTCTTTAGAATTACTTGTTAATAAACCACTCGGCTTTAATCGTCTAGCAGTCAAAGAATTTTTTGATATTCTAGAAGCTGAAATGAAAAAGACTCGTTATCCTCCAGACAGGATTTTTAATGTGGATGAGACTGGGCTGGCGATTGTTCAGTCTAAAATACCCTAG
- Protein Sequence
- MLSPSSRKKQKTWDPEEMKKAVDAVRNKQIGYKKAVKMFGVPRSTLKRLVNDPQESLELLVNKPLGFNRLAVKEFFDILEAEMKKTRYPPDRIFNVDETGLAIVQSKIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -