Dros049323.1
Basic Information
- Insect
- Diplolepis rosae
- Gene Symbol
- pnr
- Assembly
- GCA_030998225.1
- Location
- JAPYXD010000723.1:4364124-4376047[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-17 3.3e-13 50.8 3.3 1 35 486 519 486 520 0.97 2 2 1.4e-18 1e-14 55.6 5.4 1 35 545 578 545 579 0.97
Sequence Information
- Coding Sequence
- ATGAAAGAGTCTCTCTCGAAGCAGGACATAAAACTGGAATGGGAGGAACGTCGTACATCCGGAAATAGTTCTCCCCAGGTATCTCGAGTGCCCGAAGAGCAAACAAGTGCAAGTCCAAGAAGTGTTATCACAACTCGTAGACACATGAGGACCATTACAACGACAGGTCATATCACTGAAACCATAGCCAATCAGGAGCCAGACTCTCCAGAATCGAATTCTACTAATATGCAACAGGTAATCCAACAACAGCAAATGAATGTCAAGAATGAAGGTTCTGATCAGCAAAGATATCAGGAAGAAATACAGCATCATCCTGACCATGTTCCAATATCACCCAGTGGGAGTCCTGACCAGCAGCAACAGCACGTGGGAGATCAGCATCATGTTATCTTTGCCATCAGTAACGGGCAAGAACTCCCGGTTGAGGCAGCCGAAGCTACGGAAGCGATAAAGGAACCTCCCAGGTACGAATCAGCAGTTCCTGAAAGATCAGGAAGTGACCGAATCTATCTTTACTCTAAGCATCCAGAGAGGAGGGAAAACCACGTAATCACTCTTCAAGTTCAGGAACATCGTAGGCATCAGCATCAGCATCAACAATCTCACCATAGAATCAGTCCTCATCAGAATAGTGAGCAGACGGGCAGGTACCAGAACTCACCAGTCAGTGCTTCTAATGAAGAATACGAATCTACAGTTATGGTGACTCAACCTGGAGGTGTTCAATTGACTACCACAGCTGCTACTTATTCACCCCCAATTGAATTAAGAAACAGCCAACATCATCAACTTATCAGTACCGGATATGCTGAAACTGGAAATGGTACTGTTAAATATGGTACAGAAAGTACTGTTCCCGCTGATAGTATCAAGGTCTCGACTACTTACACCACCCTTGAAACAGCACCACTTCCAGCTGCGCAAGCAGTTCCTTACAATCAGTATCTTGTGTCTGCTGATACTTTTCAACAACCTGCTGGGTACAGTTATGCCAAACCAGGAGAGTTTTTCTTCTTGCCAACTACCAATCCCTCAGGAGTAAGAGTCTCAGAGGTGGACCCTCCAGCTTATATAAAAAGTGATCCAACCCTGACATCTTCTTCTCTTCTTGGAACGCGGACAGTTTCCCTTCAGTACCAACAACCAGGTTCTCCAGTTTCCCAAATGGACCTATACAGCACAGGAGCAACAATTGCTTATCAATATCCAAAATCAATCAATGACCATTATTGGACAACAGGTGGGCCTTCACCACCTCCAGGTATAGAGTGTGGACAAGGTTATCCTGGAGTAACTATATCTCCCAGTGATCCTGGAGGTGTAAACGCTGGAGTCTATTCTGGTGGTTCCTACAACATCACCTCTGGACCAAATGGTCCTTCTTCACCTTGGCTACCTTTGAGTGGTGCAGATGGATTCGATGAACCTGCGATGAGTTCAGAATTAAAAGAATGCGTCAATTGTGGAGTCATGGGAACACCGTTGTGGAGACGAGATGTAACTGGAAATTACCTCTGCAACGCCTGTGGCCTTTATAATAAAACTAATGGCGTTAACAGGCCACCCTTACGCTGTGTTAAGACAAAGCAGACCGTTACACCGGGTGGTGGAAGAAGACCAGGAGTACGTTGTGCAAATTGTGGAACAAGTAACACAACTCTCTGGCGCCGAAACAATAATGGAGAACCAGTCTGTAATGCCTGTGGGCTTTACTTTAAATTGCACAGCGTAAATAGACCAATGAGTATGAAGAAGGATGGAATCCAAACAAGGAAAAGGAAGCCAAAAAATCATGCGAATATAAATTCGGGCCTCGGTGGACCAAGTGGAGTGCACAAGACCGAGATTAAGTCCAGCTTACTCGTGGACTCGAAGCTGCAGTTGAGTGTGTTTTCAAGTGGGGCAAAGGGTGGAGGGGGCAATGATCATTATCATGTTGGTACACTGACGACTTCACATTTAGGCCATGCACATTCGCCCCTTGCATTGCCTTCAGCCGCAGTTTTGAATCGTCAAACCACCCTAACCGTGCCACCTTTAGAGCCAATCCCTAGTCGATCAACAACTGATCTTACAACGGTTATTACCTCAACGACAGCAGCTTCGCATACCGATCGATCTTAA
- Protein Sequence
- MKESLSKQDIKLEWEERRTSGNSSPQVSRVPEEQTSASPRSVITTRRHMRTITTTGHITETIANQEPDSPESNSTNMQQVIQQQQMNVKNEGSDQQRYQEEIQHHPDHVPISPSGSPDQQQQHVGDQHHVIFAISNGQELPVEAAEATEAIKEPPRYESAVPERSGSDRIYLYSKHPERRENHVITLQVQEHRRHQHQHQQSHHRISPHQNSEQTGRYQNSPVSASNEEYESTVMVTQPGGVQLTTTAATYSPPIELRNSQHHQLISTGYAETGNGTVKYGTESTVPADSIKVSTTYTTLETAPLPAAQAVPYNQYLVSADTFQQPAGYSYAKPGEFFFLPTTNPSGVRVSEVDPPAYIKSDPTLTSSSLLGTRTVSLQYQQPGSPVSQMDLYSTGATIAYQYPKSINDHYWTTGGPSPPPGIECGQGYPGVTISPSDPGGVNAGVYSGGSYNITSGPNGPSSPWLPLSGADGFDEPAMSSELKECVNCGVMGTPLWRRDVTGNYLCNACGLYNKTNGVNRPPLRCVKTKQTVTPGGGRRPGVRCANCGTSNTTLWRRNNNGEPVCNACGLYFKLHSVNRPMSMKKDGIQTRKRKPKNHANINSGLGGPSGVHKTEIKSSLLVDSKLQLSVFSSGAKGGGGNDHYHVGTLTTSHLGHAHSPLALPSAAVLNRQTTLTVPPLEPIPSRSTTDLTTVITSTTAASHTDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -