Dros044720.1
Basic Information
- Insect
- Diplolepis rosae
- Gene Symbol
- -
- Assembly
- GCA_030998225.1
- Location
- JAPYXD010000710.1:22137315-22145963[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 7e-06 0.002 20.3 1.0 1 23 191 213 191 213 0.98 2 30 0.031 8.9 8.8 1.5 1 23 236 259 236 259 0.96 3 30 0.00021 0.062 15.6 0.5 2 23 266 288 265 288 0.96 4 30 0.00015 0.044 16.1 0.8 1 21 308 328 308 329 0.95 5 30 0.0086 2.5 10.6 0.4 3 23 429 449 427 449 0.95 6 30 0.00033 0.094 15.0 0.4 1 23 455 478 455 478 0.96 7 30 0.00013 0.038 16.2 0.1 1 23 550 573 550 573 0.96 8 30 0.009 2.6 10.5 0.4 1 23 579 602 579 602 0.96 9 30 0.14 39 6.8 1.5 1 23 615 637 615 637 0.97 10 30 4e-05 0.011 17.9 0.9 3 23 682 703 681 703 0.96 11 30 0.28 80 5.8 0.8 2 23 766 789 765 789 0.94 12 30 3.5 1e+03 2.3 0.0 2 23 798 820 798 820 0.84 13 30 0.088 25 7.4 0.1 2 23 827 849 826 849 0.94 14 30 1.5e-05 0.0042 19.3 1.2 1 23 857 879 857 879 0.98 15 30 0.065 19 7.8 1.1 1 23 911 935 911 935 0.97 16 30 0.00024 0.068 15.5 3.3 1 23 938 961 938 961 0.97 17 30 0.16 45 6.6 0.6 2 23 968 990 967 990 0.95 18 30 0.0013 0.38 13.1 5.9 1 21 1017 1037 1017 1038 0.95 19 30 0.003 0.87 12.0 1.8 2 23 1052 1073 1051 1074 0.93 20 30 0.39 1.1e+02 5.3 1.0 1 23 1077 1100 1077 1100 0.94 21 30 0.0058 1.7 11.1 1.4 2 23 1107 1130 1106 1130 0.93 22 30 3.4 9.8e+02 2.4 0.2 2 23 1138 1160 1138 1160 0.94 23 30 4.1 1.2e+03 2.1 0.0 2 23 1167 1189 1166 1189 0.87 24 30 0.25 73 5.9 2.7 2 23 1198 1220 1198 1220 0.96 25 30 6.2 1.8e+03 1.6 0.7 2 23 1226 1248 1225 1248 0.91 26 30 0.0025 0.71 12.2 1.0 1 21 1350 1370 1350 1371 0.95 27 30 0.36 1e+02 5.4 1.9 2 23 1468 1490 1467 1490 0.94 28 30 3.1 9e+02 2.5 0.2 2 23 1497 1519 1496 1519 0.94 29 30 0.19 55 6.3 1.8 1 23 1530 1552 1530 1552 0.97 30 30 0.037 11 8.6 0.4 3 19 1561 1577 1560 1579 0.94
Sequence Information
- Coding Sequence
- ATGTCGATAAAGTTACAGGGGTCTGGAGCTTACCAGCACATAGCGAAGGATGATCGTCTACCAAAGTGTCTCTGTTATCGATGCATgtataatttggaaaatttttacgACTTCAGGACAGCCTGTGTTAATGCAGTCGCTCTCCTTGAGAGGTGTCTACCTCCAGATAAAGATAAGGGTGATTGGGAAAGGCGAAATTCCCCAGAGAATTACTCAGAACTACGTTCGGAACTCctcaaagaaaaagaaaatatgcCAATACTCATTCCTGAAGCCCCTGTAGTCAATCCCAACGCAGCTTTGGGTACACCACCAAGACTTAATTCTGATGGCGAAGCAGATCATTACAATGATGAAGCTCTTGAACACAGCGGTACAGATGAAGGCCTGGATGATGCTGAAGATAGAAAATCGGATGAATATGAAATGGATATGGAAACAAATCCCAGTGATTTTTTGGAAATGCCACCAATGGTTACTGATGATGTGGATGAAAATGAGACAGGACATGTTTCTGCACGATCGCGGAATTCCAGAGGCTTTCAGCACAGATCTGAACAGCACGAAGTTTACGTCTGCTCACTTTGTAACAAGGCTTTCAGCTCGAAAGGCCATTTGTCCCTTCACGCGAGAATACACGTCGGTGCAGGTGATGTCATCGGTGAAAAGGTTATCACTGACGATCACACTTCTTTCAAAAGGCCCTATCAGTGTGACCTCTGCTACAAAGCTTATTCAACTGCTAAACATCGATGGGGTCACGTCTCAACTACTCATAGaggCCATCCTGCCGTAACGTGCAGTTACTGTTCTCGTATTTATTCTACACGAATAAACCTGGAAGAGCATATCAAGTCGAGACATGCAGGTCTGCCACTTCCGCCTGAATTGCCAACCTCTTACGTTCAACCAGAAAACAAATACCAGTGCAAGACTTGTCCTAAAATGTATACGAATACAACAGATCTCAATAAACACAGCCGGATATGTACGGGAGGCCTGCATAAGGAATTGCCAAATAATAACACACTtgtagaaaagttgaaaaagaGTCAGGCTGACATTTCTGATATGTCCAGTAATGAATCGAACGATGAATCTAAAGATTATAAAAACGCTGAGGCGAAGCTTGCGAAAAATCCTCAACTTACGATTCTCAAACAGGCGCTCACCAAAGGAGAATGTTTGAAGCGAAGCTATGACGAGAAGTACAAGACTAGTTCTAAAACCAAAAAGCAAGCGAGAACCAATAATAGTGAGACTGATGTACAGAAGCGATGGTTCTGCGAATCCTGCCCTCAAAACTTCACCTCAgtagaaagcttaaaaaaacATGAACTTTCACACGAAGCCGAAAAGCCCTATTTTTGTTTGCTATGCGAGAAAGACTTTGCCCAGAAATCATCACTGAGCAATCACATTGTAACGTTACACGGCGTTGATCCTCATCCCATTGTTGAAAGTGATAGGTGCCTAAAAAAGTCACTGGGTTCTCAAGGGTGGAATAAAAAAGCAGAAATTGCAAATGGTGAACCTGaattagtaattaaaaaagAGGAATCTTTGTCACCTTATCCAGAAACAGCTTTAGATAACGAAGAAGATCACGAAAGTAATCAGGAGAAGGTCTTTGAAATTGAAACAGTCTTTGTTTGCGAAATCTGCACCCGAGACTTTAACGATAGAGCCTCACTGTGGCTTCACATCCGCGCCACCCACAAGGAATACGCAGCTTTTGCTTGTGGAGTTTGCTTGAAAATCTGTTCTGATAATGCGCAGTTGCTCAATCATGTGAATATGTATCATGGAGGCTCGAAACTCCTCATGTCGGAGCAGAGACGCTACAGTTGTACAATTTGTGGAAGACAACATGACTCGCGAAAGAAGCTTATCACCCATGTCTCAATTCACAACGTGGATCCCAGCTATGATCCAGCGAGTTTCGTGCAACTAAACAGCAATTATTACAACGAAAATGTAAACAGCAACGAAGGAAACGAACAGATGATGGATGGCGAGATTGAGGATGGAGAAAAAGTCGACTGCTACATTTGCTACAAATCATTCCCCAACGAAGATCATCTAATAAGGCATCAACGAAATGCACATAAGTCCGATCCAGCGGTAGCGATTGGAGAATGGACAGCAAATGGTAGTGGCTCTGGGCCTAATGGAAATGGAAACCGGGCTCAGTATCATTTATTCTTTGTCTGCGAACTTTGTGGTAGTTCTCATCCTAGCAAATGGGAACGCTGGCTTCACGTTTCAAGCGTACATGGAAACGAATCTACTATCAAGTGCGAGAGGGAAGATTGCGCAAAGATCTTCGCGACGAAGTCCCTTCGAAATGAACATGCCCAGCATCATATGATTCAAGGTAGCTCGCCGAACACGTGCGAAATCTGTGGAAAATTATGGGGTAGTCGAGTAGATTATTGGAAACACGTGATGGGAGTTCATTCTGATACTGTTCCTCTAATATGTGGAGTTTGCCTAAAAGTTTTCCCTAACGTTCTTCAGTTGAGCTCACACGTCAGAAACAATCACTGGCCGTTGACAAATGGCGATTTTAGTTGTGATATCTGCGGCAGGCCTTATTCCAACAAGTCTAAAATGTCTAGGCACAGAAAAATCCATGGTCTTGATGGCGAAGGTCATGCTTATCCCGAACCTAGTGAATTCGTCAACGATTCTGGACGACTGGATAACGGAGGAACAGCTGATCTTGATTTTAATTGTGAAATGTGTGGGGATTTGAAGTTTATGAACTTGGAAGACCTTTGTAATCATCGAAGAATGGCACACAGTCTTTTCCCTTGCGATTTATGCAACAAGTGTTATGGAAGAACCTCACATTTGTGGAAGCACGTTAATCGAGTTCACAAGGGTCATGAGGATGTGACCTGTCGATTTTGCATGAAAACGAGCGCCTCGAGAGACCATCTAGCTGCTCATATTGCTAAGATTCATAGATATGAGCCTGAGGTGAAAAACGATGCCAGGGAATCGACGAATTCCAAGCTTGCTGTTCCTGAAGACGATATTCTCCACCATTGTGAGAAGTGTAACAAAAGCTTCCACAAACGGTATTTGCTTCGGCGTCATATGAAAGGGTGTCAAAATTATCGGAAAGATCCTGGAGCGCTTTTAACGCGGTGTCGAGCCTGTGAGAGAATATTCAAAGATCGAGCGAGTCTTCAAAAGCACATTGAGAACCATCACAGCACTTACACTTGTCATTTGTGTAATGAGACTATAACTTCGAAACTGGGGATTATGACTCATAATCGAATTATGCATATGGACCACCCGGACCTCACGTGTGATAATAGTAATTGCAAGAAGCTTTTCCGTACGAAAGAGGACCTAGAGTCTCATAGAAAGGATCATAGGTACCACACGAACCTAAACGTTTGCGATTTCTGTGGGGATACTGTGGAGAATAAACTTAAGTTGAAGATGCATGTGTTGTCTTTGCATCGAAACGAAATCGGTGTTTCTTGTGGGGTGTGCCTTATTCCAATGAAAGATCCAAAGGATCTGAAAAAACACGTGGAGGACACCCATGAGAGTATTCTTTCGAAACCAAATACTTGTCAGGTTTGTGGTAAGCAGTATGCATCAAAGTGGAAAGCTTTTGATCATACGAAGAAGTGCCATGGGAAGGTTTTTAAGACTTGTAAACAATGCCTGGCTGTGTTTACTGCTGAAGAAGATATGCGATATCATTATGAACATATCCACAACATTCCAAAAGATCAACTAGCTACTTTCGAATATCGCCTAGAAATCGGACGTAAGCATCAGGATCATGAGTCCTTGGAAATAGTAATGAAAGAAGAGCCAGAAGAATTGGAATTTGAGGAGGAACCCGTTGAAGAGTATGCTAATGATTATAAGAGAAGAATATCTGAATCTGATTGCGATTATTATGGTCGAGGTGATTTCTATATGAGAGATAACAACGATCAAGAGAAACCAATGCGGTCAACGAAAAGGATGAAGCTGGACTCAAGCGCTAAACGAAAAATGAAATATCGCGAAAATTATGAGTGCAAAAATTGCAAGAAGCTATTTTACACTAAGACCCTTTTTTGGAATCATATTAATGTATGTGCAAAGCGAAATACGTCAAATAAGGAGGAGGTGATCAGCTTCCCAACATCAATTCTTGAGGCACATTTGAAGAATAACAACCAAGTCAAGAGAGAAGAACCTGAACAAGATCTTGACGAGAATAACTTAAACATTCCAGATTTTAATCTCTTTGAGGACATTAACATGCAGCTGTCAGGTCAGAAGCCAGTTCAGAATATTTCATTGAAATCATCCTCAAACAGTAACAAGTGCTCGAGGAAAGACTCTAGGAAGGTTTACGATGAATCAACGAATACTGAGTGCACCTGCGAGGTTTGTGGGAAACAATGGCCtgcaaaaaaacatttatgGCAACATCTGATTCGTTTTCATCGAAAGGAGGCTGCTGTCACTTGTGGGGTTTGTTTAAAGCTCTGCCAAACTTATGAAGATTTGGCTGATCATCTGAAGGCTGCACATGAAGCTTTGTTGTCCTGTGAGGGCAATAATTTCACCTGCAAAATCTGCGGAAGGTATCATAACGCTAGAAGTAAATTGTTATTGCACATGAGTATCCACATTAACTGCAAAAACAATCCAATGTGCAACAAGTGTAAACGAAGCTTTGAGACAGACGAGAAATTGAAAGAGCACGTAGGGAATTGTGAGGGAAGACAGTCAGGGTTAGGAATCCGACATGATGCCGGGGAAGATTTAAAGAACGAAAATGATGAAAATGATGAGAAAGGAAGTCTTATAGGAGACGAAGGAGAAGAAAAAGAAGCAGATTTTGAATCAGGTGAAGAAAAAGCTTCTGATAATGCTGATTCTGATGATAATGATTCAGATGATTCGGAAGATTCGGAAACTGATAGTTCCTCTAGCTCGAGTGATGATGAAAATGAGAATGAAGAagatgaaaatgaaaatgaaattgCGCCTGAATCGAGAACTACAAGTAGACTCGGAGATTTGAGTTGTACAAGTGATAGTGAGGAAGAAGGCTCGGATAATTCGGAAGCCAATTCGGATGTTGAAGATGAAATTAGGTCGATTTCTAAGTCTGAAGATAACAAGGAAGATAGAAGGGTTGATTCCCCCTTAGCGTCCAAATCGGAGATAAATGATTCAGCAGATTGTGGAGGTGTGAAGGAGGGTCCAGAGAAGATCGAAATAGATAGTATGGATTATTCTGATGATGAAGGTCCTCCGATTTTGAGTCCAATGATGCCGTTGTTGCCACCGCAAGAGGAGGAGTTGCCTAATCAGCTGGATGAGATAACCCATAAGCTAAGTCCAATGGTGTCTTTAGAAACAAAGATGAGAAAGGAAACGGATAATTTTAAGTTTCAAGGTATGAAAGTATCCTTTCACGGCCTTCATAGTGATAATCAACGAGATAATGAAAATCCGAGAGAGTCAGAAGAATCAGCGTCTGAAAGTGAAGATGATaacaaaatgtgtatttatgAGGAAGCTGGGGCCCAAGATGTAAAGCAAGAAGATTCGATTATGATCAGTGACGAGGATGATGAACCAGAAATACAGgGAGAAGTTATGGAGGGGGAAATCTCAGAAGAAAAAAGAACAGAACTTGCCTGCACTGAATCAGAGGAAGGAAGTGGAAATGAAGAAGAGGAATCTGAAtatgaaaatgatcaaattcAAATTACAAACCAAAATAGTCGCGCTGTAACAATAGAACAATCAGAATCCCTTTCCCAGGGCTTTGAAGAAGAAAACTCAATTCAAGAACAAGAAGTAGTCGAGGAAGGAGTCGAGGAAATAGAAGTGGAGCTTCCAAACGAAAATAACATTGAAGTCGAAGAAGAAACAGTTGAGAACAATTTTCTTGAAGAGGAAGAAGTGACAGGAGAAGAAAATTATGATGAGGAAACAATAATGGAAAATGAAATGAACAACGAAAATCATTCCgcacaaaatttaaataaaactatcCTAACGGTTGGTAAGGATTCTGAAGGTAATCCTATCTTGATTCGCGAAGTAGTAACTCATTACACTTACCAAGACGATTACGCTTGTGAATCTGATTATGCACACCTCCCACAGGaagataattctttttttaataccGACGAAGATCAGAGGATATCGGAAGAAAACTTCGATTTGAATAATGATAATCTTGACCAAACTTCAATTGAACCGAAGGCTCAGACAGAAGACGATTTATTGCATCACGAGGAGGTAGAAGTCGAGGAACAGATTGAAGACAAAGCAGACAGTGATATTCAAGAGTCAAGAACGAGTGCCAAAAGTTAA
- Protein Sequence
- MSIKLQGSGAYQHIAKDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPDKDKGDWERRNSPENYSELRSELLKEKENMPILIPEAPVVNPNAALGTPPRLNSDGEADHYNDEALEHSGTDEGLDDAEDRKSDEYEMDMETNPSDFLEMPPMVTDDVDENETGHVSARSRNSRGFQHRSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSFKRPYQCDLCYKAYSTAKHRWGHVSTTHRGHPAVTCSYCSRIYSTRINLEEHIKSRHAGLPLPPELPTSYVQPENKYQCKTCPKMYTNTTDLNKHSRICTGGLHKELPNNNTLVEKLKKSQADISDMSSNESNDESKDYKNAEAKLAKNPQLTILKQALTKGECLKRSYDEKYKTSSKTKKQARTNNSETDVQKRWFCESCPQNFTSVESLKKHELSHEAEKPYFCLLCEKDFAQKSSLSNHIVTLHGVDPHPIVESDRCLKKSLGSQGWNKKAEIANGEPELVIKKEESLSPYPETALDNEEDHESNQEKVFEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENVNSNEGNEQMMDGEIEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVAIGEWTANGSGSGPNGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSSVHGNESTIKCEREDCAKIFATKSLRNEHAQHHMIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVRNNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHAYPEPSEFVNDSGRLDNGGTADLDFNCEMCGDLKFMNLEDLCNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCMKTSASRDHLAAHIAKIHRYEPEVKNDARESTNSKLAVPEDDILHHCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRIMHMDHPDLTCDNSNCKKLFRTKEDLESHRKDHRYHTNLNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHESILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFTAEEDMRYHYEHIHNIPKDQLATFEYRLEIGRKHQDHESLEIVMKEEPEELEFEEEPVEEYANDYKRRISESDCDYYGRGDFYMRDNNDQEKPMRSTKRMKLDSSAKRKMKYRENYECKNCKKLFYTKTLFWNHINVCAKRNTSNKEEVISFPTSILEAHLKNNNQVKREEPEQDLDENNLNIPDFNLFEDINMQLSGQKPVQNISLKSSSNSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRKEAAVTCGVCLKLCQTYEDLADHLKAAHEALLSCEGNNFTCKICGRYHNARSKLLLHMSIHINCKNNPMCNKCKRSFETDEKLKEHVGNCEGRQSGLGIRHDAGEDLKNENDENDEKGSLIGDEGEEKEADFESGEEKASDNADSDDNDSDDSEDSETDSSSSSSDDENENEEDENENEIAPESRTTSRLGDLSCTSDSEEEGSDNSEANSDVEDEIRSISKSEDNKEDRRVDSPLASKSEINDSADCGGVKEGPEKIEIDSMDYSDDEGPPILSPMMPLLPPQEEELPNQLDEITHKLSPMVSLETKMRKETDNFKFQGMKVSFHGLHSDNQRDNENPRESEESASESEDDNKMCIYEEAGAQDVKQEDSIMISDEDDEPEIQGEVMEGEISEEKRTELACTESEEGSGNEEEESEYENDQIQITNQNSRAVTIEQSESLSQGFEEENSIQEQEVVEEGVEEIEVELPNENNIEVEEETVENNFLEEEEVTGEENYDEETIMENEMNNENHSAQNLNKTILTVGKDSEGNPILIREVVTHYTYQDDYACESDYAHLPQEDNSFFNTDEDQRISEENFDLNNDNLDQTSIEPKAQTEDDLLHHEEVEVEEQIEDKADSDIQESRTSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -