Basic Information

Insect: Diplolepis rosae
Gene Symbol: ZNF236
Assembly: GCA_030998225.1
Location: JAPYXD010000723.1:2359567-2376856[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00014 0.04 16.2 1.7 2 23 188 209 187 209 0.96

2 28 3.9e-05 0.011 17.9 0.6 1 23 215 237 215 237 0.98

3 28 5e-06 0.0014 20.7 0.4 2 23 243 264 243 264 0.98

4 28 0.0078 2.2 10.7 0.2 3 23 272 292 270 292 0.96

5 28 0.00012 0.033 16.4 2.9 2 23 303 324 303 324 0.98

6 28 6.8e-07 0.0002 23.4 1.3 1 23 345 367 345 367 0.99

7 28 1.1e-05 0.0032 19.6 1.6 1 23 373 395 373 395 0.98

8 28 0.00042 0.12 14.7 2.6 1 23 401 424 401 424 0.95

9 28 0.0027 0.77 12.1 2.1 3 23 435 456 433 456 0.97

10 28 4e-07 0.00011 24.2 1.3 1 23 565 587 565 587 0.99

11 28 7.1e-05 0.02 17.1 1.5 1 23 593 615 593 615 0.99

12 28 9.2e-05 0.026 16.7 0.5 1 23 621 643 621 643 0.97

13 28 0.00056 0.16 14.3 5.0 1 21 647 667 647 669 0.95

14 28 0.008 2.3 10.6 8.2 1 23 724 746 724 746 0.98

15 28 7.7e-05 0.022 17.0 7.2 1 23 752 774 752 774 0.99

16 28 0.001 0.29 13.5 5.9 1 23 780 802 780 802 0.97

17 28 0.00011 0.032 16.5 7.4 1 23 808 830 808 830 0.98

18 28 0.2 58 6.2 1.1 1 23 1147 1169 1147 1169 0.86

19 28 0.018 5.3 9.5 1.2 2 23 1192 1213 1191 1213 0.97

20 28 0.00013 0.037 16.3 2.0 1 23 1219 1241 1219 1241 0.98

21 28 0.031 9 8.8 0.2 1 23 1247 1269 1247 1269 0.97

22 28 1.1e-07 3.1e-05 26.0 1.4 2 23 1342 1363 1341 1363 0.98

23 28 0.069 20 7.7 6.5 1 23 1369 1391 1369 1391 0.98

24 28 0.00014 0.041 16.1 1.6 1 23 1397 1419 1397 1419 0.98

25 28 0.0001 0.029 16.6 1.9 1 23 1425 1447 1425 1447 0.98

26 28 0.00035 0.1 14.9 1.0 2 23 1660 1681 1660 1681 0.97

27 28 2.2e-05 0.0062 18.7 2.9 1 23 1687 1709 1687 1709 0.98

28 28 3.8e-07 0.00011 24.3 2.0 1 23 1715 1738 1715 1738 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00014	0.04	16.2	1.7	2	23	188	209	187	209	0.96
2	28	3.9e-05	0.011	17.9	0.6	1	23	215	237	215	237	0.98
3	28	5e-06	0.0014	20.7	0.4	2	23	243	264	243	264	0.98
4	28	0.0078	2.2	10.7	0.2	3	23	272	292	270	292	0.96
5	28	0.00012	0.033	16.4	2.9	2	23	303	324	303	324	0.98
6	28	6.8e-07	0.0002	23.4	1.3	1	23	345	367	345	367	0.99
7	28	1.1e-05	0.0032	19.6	1.6	1	23	373	395	373	395	0.98
8	28	0.00042	0.12	14.7	2.6	1	23	401	424	401	424	0.95
9	28	0.0027	0.77	12.1	2.1	3	23	435	456	433	456	0.97
10	28	4e-07	0.00011	24.2	1.3	1	23	565	587	565	587	0.99
11	28	7.1e-05	0.02	17.1	1.5	1	23	593	615	593	615	0.99
12	28	9.2e-05	0.026	16.7	0.5	1	23	621	643	621	643	0.97
13	28	0.00056	0.16	14.3	5.0	1	21	647	667	647	669	0.95
14	28	0.008	2.3	10.6	8.2	1	23	724	746	724	746	0.98
15	28	7.7e-05	0.022	17.0	7.2	1	23	752	774	752	774	0.99
16	28	0.001	0.29	13.5	5.9	1	23	780	802	780	802	0.97
17	28	0.00011	0.032	16.5	7.4	1	23	808	830	808	830	0.98
18	28	0.2	58	6.2	1.1	1	23	1147	1169	1147	1169	0.86
19	28	0.018	5.3	9.5	1.2	2	23	1192	1213	1191	1213	0.97
20	28	0.00013	0.037	16.3	2.0	1	23	1219	1241	1219	1241	0.98
21	28	0.031	9	8.8	0.2	1	23	1247	1269	1247	1269	0.97
22	28	1.1e-07	3.1e-05	26.0	1.4	2	23	1342	1363	1341	1363	0.98
23	28	0.069	20	7.7	6.5	1	23	1369	1391	1369	1391	0.98
24	28	0.00014	0.041	16.1	1.6	1	23	1397	1419	1397	1419	0.98
25	28	0.0001	0.029	16.6	1.9	1	23	1425	1447	1425	1447	0.98
26	28	0.00035	0.1	14.9	1.0	2	23	1660	1681	1660	1681	0.97
27	28	2.2e-05	0.0062	18.7	2.9	1	23	1687	1709	1687	1709	0.98
28	28	3.8e-07	0.00011	24.3	2.0	1	23	1715	1738	1715	1738	0.97

Sequence Information

Coding Sequence: ATGCTGACTACAAGATCTAATGCAGAAAATTTGTTATCTACTATGGACTCAATACCGTtgagttttattatttctgatgATGGGCACACATTACTGGCAGTAACAGAAAATGGGGATGGCTCCATTGAAGTAGTGAGTGCGCCGGTAACTTACATAAACGACTCTGGTGATAGTTCCCTCTCTACTAAAATACCCAACGACAATGTACAATCAAATACACCtttattacagtttaatataCAGGGAACAGATGCATGTAGAAGCCAACAAGCAACATTAGTGCCTGCTCACATAATTTCATTCATTTCAAACGATTCTGATGTAACTGCAGGAAAAGAAAATGACGCTACAATCGCTTATCATGTTTCTCAGTACCATCCAATAAAGGCGAAACCGGATAAAGCTTGTAAAGAATCCTTAACTCTTCAATTTATTGAACCGACATCTATGTCTGCCCTCCCAGTATCTAAGTCTTCCTCACCTCAGCTAAAATCTCCGTCTCCGAAGAGAAGCCCTGGCAGACCAAAAAAAGTGGAAAGCTCTGTTAAAGTAGTGGTTTTGAAGTGCGAAATCTGTGGAATAGAATTTAGGAAGCAAAGTTTATATCGCAAGCACTTGGAACATCATGCAGAAGAAAAACCACATCGATGTCCTAAGTGTCCTGCATCCTTCAATGTTCCGACAAATTTTACTCTTCACATGGCAACGCACAACATCGGTGAACCAAAATGTCCTGAATGTGGCCGAAAATTCGCGCGGATGGCAAGTTTGAAGTCTCACATGATGCTACATGAGAAAGAAGAAAATCTTTTCTGTACCGAGTGCGAAGATGCCTTCTCCACGAAGGCTCAACTCGACGCTCATTTAAAACTTCACAATGAAAAATGGACAACCGACGATGTCAGGAAGTGCAAGCTTTGCCACAAACAATTCACTCAACCAGCCTTGTACAGACAACATATTCGAGAACATTATAGgttgcAAACGAAGCTGGTGAAGCAGACAAGAAAGGGGACGAAGCACAAGACCATGTACAAGTGCAAGATTTGTCTAAAATCCTTCCAGAAACCTAGTCAGCTGATGCGGCATATCAGGGTACACACGGGCGAGAAACCATTCAAGTGTACTGTTTGTAGCCGCCAGTTTACGCAGAAAGGATCACTTCAAATTCACATGTCACAGCACGATGGACTGAGGCCACATGCTTGTAATTTCTGTAGCGCCAAGTTCAGCCAAAAGGGAAATCTAAACGCCCATATCCATAGGGTGCACAATCTACCGGAAGGAGCGCCTATATACGGATGCACTTATTGCACTTGTGCTTTTAAGAAACTCGGTAGCTTAAATGCACATTTAAAGCGAATGCATTCTTGTCCTATTGAGGAAGAAAATCCGAAATGTGATAGTTCAACATCAGAAGAAGACTTGCAGGCAACTGTGCAAAATGTCATGTCACAGCTTGCTTCGCTTGAATCAGAAGTACAAAATCAGGCAGATTCAACTGCAAAAGATAATGATATCTTACAACAGGCTTTGCAAAACAGTGGACTACCAAGCAAGGAAAAGCAAGCTgaagtTGCTAAGAAAGCTAAGGGGCGATCAATGATGGTCACATTATTAGACAGAGCTCCTGATGGTGATTCTAGAAAATATGTGACAATTAAACAGCGACACGTTGGCGACATGCTATGGTACACATGTACCTTCTGTAACAAAGAATTCAAAAAGCCGTCGGATCTGATAAGGCATTTACGAGTGCATACTCAAGAGAAGCCGTATAAGTGCTCCTACTGCAGTCGCTCCTTTGCCTTGAAATCAACAATGCTGGCTCACGAGCGAACACACTCTGTCACTAAGAAATTTCCTTGTGGTTCGTGCGAAAAAGTATTCACTACTCGAAATAGTCTTACGGCTCACTCAAGGTTGCATACGAGGCCCTTCATTTGCAGCGTTTGCGAGAAGTGCTTTAGTGGTAGTTCCTTGTTAAAGAATCATATGAAGTGCCATGCAAAGCCTAAGACAAAATTATCTCCAGAAGCAGAAAGTCTCGTACCTCAGATAGTTTTAGAGGAGCCACTGGTTATCAGCGACGCGGGGAATAAAATTAGCGTGGCTCAAGTAAAGTCGAAGAAACAACAGGTCTACGAAGGTGGAGACTCAGCTAGGCCCCACAAATGTACAATGTGCAGTGCTGCATTTAGAAAAATTAGTCATTTGAAGCAGCATCATCGAAGGCACACGGGAGAAAGACCTTACAAGTGTCATAAATGTGATAGgaGATTCACTTCGAACAGCGTTCTAAAATCGCATTTGCACACTCACGAGGATGCGAGACCGCACAGTTGTTCCGTCTGCAACACAAAATTCTCAACGCATAGTAGCATGAAGAGACACTTGGTTACGCATAGCAATAAAAGACCTTTTATGTGTCCCTACTGTcacaaaacttttaaaacttccGTTAACTGCAAAAAACATATGAAAATACACAAGACCGAATTAGCTCAACAGcaaGTGGAACAACGGAAATTGCAACCGAAAATTACCACGGCTGTAGAGAATGCTGAGAATAAAGACAAGGATATCTCGGTACCTGAAAACCTCGCTTTAGGAGATGAGATAACAGTGCCATTTCAGAATCAGACTGCTAATTTTGTGCAAAATTTCTCTGGCCAATATCAACCTATCGTGGTGCAACAAGACAAAGTCCACATTCCAATTTCTGCCCCGGAAAGTATTGTAAATCAAAACATCCTGAACGTAAGCAATGCTAGTTTTGGAGTTACTCAGACTTTACATGCCGATGAAACTGGTACTATTACTTTACCAAATTACTCTGCTGAGCACACACTTTCTGCAgagAGTATACGAGAAATTGAAGAAACTTTGAACCAACAACTTCTCAATATCGGAATGAACCTTGGGTTAGAAAACCAAGTATCGAAGCAGATGACTGAAACAAATGGTATTTCTCTTAATTCCAGAAGTCAGCCTGTCCTTAATATTATTTACAATAATCCTAAAGCGCTAGACTCCGTTACAAATAACGAAGTGAATAATCAAATTTTCACATCCCAGCTCGATACTTTCGACATGAGTCAAATCGCTTTGCAGACAAATGAAGATATGGATGTTGAAATCAATTCGGGCTCGACAACAAGCATGGCTAATATTTTACCAAGATCTGTACCAGAAGAGCAACATTTATCTATTCCAGTAACGTCTGGATCTATTGAGAGCAATCAATCGAAACCAATGAAGCATTTAATGGTCGTTAATTCAATGCAAACTCGGCCCGAAATATCAAGACCAGTTCAGGCTTGCAAAAagtattcaaaaattattgCCAAAGCTGATACAACCAATGTAACTGATGTTCGACCTCTAAATCTAAAAGAGAAGGATGTCGAGATTTCAGGCGATATAGATGAATACATGTTTTCgtGTACAATATGTGATAAATTGTTTGAGAAAGAATACGATTTAGTATGCCATGTAGAAGAACACCTCAATTTAGCAACAAAAAATCCTGATCCTAAtagaataaatttgtttgaaactAATCCTTTACTACAGTGTCATATGTGCAGGAAAAACGGATTCACAGCTCCCGAATTAAAGGAACACTTGCAAACTCATCAGGGTTCTAAGGAGTTCGAATGTACGGAGTGTTCTCTGAAATTCTGTACAAATGGAGGTTTGAGTAGGCACTTAAAAATACACGCGACTAAGCAgCAATACAAATGTATTATTTGCGATAAAGTATTACAGAACAAAGTACAAATGGAGATGCATCTTAGAGGGCATGAGGAATTATTCACAACTGGTGTGGTGGAACCGGATAGTTCTGAAAAAGAATCGCTGCCTTCAGAGATCAAATTCAACGAGGTTGATGATAATAAAGCTCCGATGAATGCAGATTCGAAAATATCGGAGCAAATTCTGTTAGACTCTGCAGAGATAATGGAAAGACTTAAGcttCAGGGATTAGAGGGCAAAATGGAGAAGAAACCAGAGAAGAATAAGTGCAAATATTGTCCGAAGACTTTTCGAAAACCCAGTGATCTCATAAGGCACGTTCGAACCCACACGGGTGAGCGACCTTATAAGTGTAACTTTTGTAACAAGAGCTTTGCAGTCAAGTGTACTCTCGATTGTCATATGAAAGTACACAGTGGGAAGAAAAGTTTCAGTTGCCATGTGTGCAATAGTTTATTCGCGACGAAAGGCAGCTTGAAAGTCCACATGAGACTACACACTGGTTCAAAACCCTTCAGATGTCCAGTGTGCGATATGCGATTCAGAACCTCAGGCCATCGGAAGGTCCATCTCTTGTCCCACGTCAAGGAACAGAAAGGCAATTATCGAAAACCAAAACAACGTAAAACTGCAGCCATAGCGAGCGTAGTCGCTAGTGTAGAAAACGCAATTGAGTCAATTTCCACAGTGAATGTAGTTCAAGATACTTTACAAGAACAACAGGAATCACAATATTCGAATATAGAGACGGTTACAATCGACGCTTCCGCTCTAACCGATCAAATAACCTTTAATACTGACGGAACCGTTTCAAATAACAATTCTGTGCTCTCCGTCAATGAAAGTAATCAACTCGTAGCCAACTTGCAGTTCCTTCTCGCTAATGGTCTCATAACAATTCAACCTGATGGGCTTGTAACATTCCAGGACTCGATTCTTCCTGGATTAACTAATTTACAATTGGAAACTTCTCAGGGTGAATTTGTTCAATCCACAGACTCTGAGAATGTTATAATCACGCAGGATTTAAACTCTATCAATTTGGAAGCAGTGAACGAATCTGGATTGTTGAACAACTGCATGACAGTTTTAGAAGTATCGGGCAACagcaatattttaaattcttcTATTAATAATTCTAATATTAACAGTATTCCTAATTCTAATAAGCTGGAAACAAGTGGGAGTAAAAATATGAAGACTGGAATACCTAGGAGAGAGTGTGATATTTGTGGAAAGGTGTTTATGAAGCCTTGCCAGATTGAGAGACACAAAAGGATCCACACTGGCGAAAGGCCTTTTAAATGTGATCTTTGTGATAAAGCCTTTGCCCAGAAAAATACTCTCCAGTTGCATCAAAAACACCACACAGGGGATCGTCCTCATACTTGCCCGTATTGTCCTTATTCCTTTTCACAAAAGGGAAATCTACAAACTCATCTTAAACGAGTTCATCAGCTCGATGCCGTCGAGGCGAAAAAATTATGGAGAGAACAAACGTCGAAACTTGAGAGCAGAGTCGATCCTAGAGTTCTAGGTCTTGACGATATCTCGTTCGTCGAGCTGTTAAAGTAA
Protein Sequence: MLTTRSNAENLLSTMDSIPLSFIISDDGHTLLAVTENGDGSIEVVSAPVTYINDSGDSSLSTKIPNDNVQSNTPLLQFNIQGTDACRSQQATLVPAHIISFISNDSDVTAGKENDATIAYHVSQYHPIKAKPDKACKESLTLQFIEPTSMSALPVSKSSSPQLKSPSPKRSPGRPKKVESSVKVVVLKCEICGIEFRKQSLYRKHLEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGRKFARMASLKSHMMLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWTTDDVRKCKLCHKQFTQPALYRQHIREHYRLQTKLVKQTRKGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRQFTQKGSLQIHMSQHDGLRPHACNFCSAKFSQKGNLNAHIHRVHNLPEGAPIYGCTYCTCAFKKLGSLNAHLKRMHSCPIEEENPKCDSSTSEEDLQATVQNVMSQLASLESEVQNQADSTAKDNDILQQALQNSGLPSKEKQAEVAKKAKGRSMMVTLLDRAPDGDSRKYVTIKQRHVGDMLWYTCTFCNKEFKKPSDLIRHLRVHTQEKPYKCSYCSRSFALKSTMLAHERTHSVTKKFPCGSCEKVFTTRNSLTAHSRLHTRPFICSVCEKCFSGSSLLKNHMKCHAKPKTKLSPEAESLVPQIVLEEPLVISDAGNKISVAQVKSKKQQVYEGGDSARPHKCTMCSAAFRKISHLKQHHRRHTGERPYKCHKCDRRFTSNSVLKSHLHTHEDARPHSCSVCNTKFSTHSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCKKHMKIHKTELAQQQVEQRKLQPKITTAVENAENKDKDISVPENLALGDEITVPFQNQTANFVQNFSGQYQPIVVQQDKVHIPISAPESIVNQNILNVSNASFGVTQTLHADETGTITLPNYSAEHTLSAESIREIEETLNQQLLNIGMNLGLENQVSKQMTETNGISLNSRSQPVLNIIYNNPKALDSVTNNEVNNQIFTSQLDTFDMSQIALQTNEDMDVEINSGSTTSMANILPRSVPEEQHLSIPVTSGSIESNQSKPMKHLMVVNSMQTRPEISRPVQACKKYSKIIAKADTTNVTDVRPLNLKEKDVEISGDIDEYMFSCTICDKLFEKEYDLVCHVEEHLNLATKNPDPNRINLFETNPLLQCHMCRKNGFTAPELKEHLQTHQGSKEFECTECSLKFCTNGGLSRHLKIHATKQQYKCIICDKVLQNKVQMEMHLRGHEELFTTGVVEPDSSEKESLPSEIKFNEVDDNKAPMNADSKISEQILLDSAEIMERLKLQGLEGKMEKKPEKNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCNFCNKSFAVKCTLDCHMKVHSGKKSFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCPVCDMRFRTSGHRKVHLLSHVKEQKGNYRKPKQRKTAAIASVVASVENAIESISTVNVVQDTLQEQQESQYSNIETVTIDASALTDQITFNTDGTVSNNNSVLSVNESNQLVANLQFLLANGLITIQPDGLVTFQDSILPGLTNLQLETSQGEFVQSTDSENVIITQDLNSINLEAVNESGLLNNCMTVLEVSGNSNILNSSINNSNINSIPNSNKLETSGSKNMKTGIPRRECDICGKVFMKPCQIERHKRIHTGERPFKCDLCDKAFAQKNTLQLHQKHHTGDRPHTCPYCPYSFSQKGNLQTHLKRVHQLDAVEAKKLWREQTSKLESRVDPRVLGLDDISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -