Basic Information

Insect: Diplolepis rosae
Gene Symbol: snpc-4
Assembly: GCA_030998225.1
Location: JAPYXD010000698.1:4808012-4810899[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.14 5.1e+02 2.7 0.1 3 17 168 182 167 184 0.92

2 6 7.4 2.6e+04 -2.7 0.0 23 42 229 250 223 251 0.66

3 6 9.4e-10 3.3e-06 28.9 0.5 3 44 262 305 260 307 0.94

4 6 1.7e-10 6.1e-07 31.3 0.2 2 43 314 359 313 362 0.96

5 6 1.6e-12 5.4e-09 37.8 0.0 1 44 368 412 368 414 0.93

6 6 1.8e-11 6.4e-08 34.4 0.1 2 42 419 459 418 462 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.14	5.1e+02	2.7	0.1	3	17	168	182	167	184	0.92
2	6	7.4	2.6e+04	-2.7	0.0	23	42	229	250	223	251	0.66
3	6	9.4e-10	3.3e-06	28.9	0.5	3	44	262	305	260	307	0.94
4	6	1.7e-10	6.1e-07	31.3	0.2	2	43	314	359	313	362	0.96
5	6	1.6e-12	5.4e-09	37.8	0.0	1	44	368	412	368	414	0.93
6	6	1.8e-11	6.4e-08	34.4	0.1	2	42	419	459	418	462	0.96

Sequence Information

Coding Sequence: ATGAGTGACACAGAAGACCAGCTGATTCTTGAAGACATTCAGGCCTTGGAAAATGCTTTGTCCCAGAAACCTGAATCACATATAATACCTGCAATCTCTCTGAAATCTGAAATTATTTCTGACATTAATCAAACTCCAGAAGTTGAAATTAACCAGATCCAGCTCTTTCAAAATTCCGATTCTCACCCAGCCTATGAAGAGGAAAATGCTATAGAAAATACTGACACAGCATTGCAATTGAACCAAAAACTAATCGAGCGTCTAACTGCTACTCGCAACGAAGTTGCTGCGATCTTAGAAGAGTGCATAAGAAAAAGAGCGATAATCGATGCCAAAATAAATCAACGATTAAAAATCGTACCAAGTACCAAAACTTTGTCCTCTAATGCTGGAATGCCTTACTTTAAAGATAAAGATTTTTTCTCTGCTCCTCCAAATGAAGATATGAAGTTAATACAGGATAGAGGGGAATTGCAGATAATTCATCTTCGACGGGTTTGCCGCTGGACGACAAAAGATAAAGAGATCCTGATGAAGGCTATACAACACGAAATTATCGCGGAGTTGAAAGATCTTGATGAAAGTGAGGAAGATGCAGTTGAAAAAATGCATTTGGGGAAGAGTCACTGTTTGCCGCCTATTGTTAAGAAATCTATTGGACCTCTCGGAACTAGGGAATTTGATTGGATGAAAATAGCTGTGAcggattttcaaaataaacattctCCGGAAGAATGTCGCGTGATGTGGAATATCTTTTTGCATCCGGATATCAACAAGTTCAAATGGAAGAAGAAAGAATTAGAGGATTTAGAAAAGCTTGTTAAAAAGTACAATTATCAAGATTGGGACGCAATTGCCAAGGACTTAGgcACCCAAAGAAGTGGCTATCAATGTTTTGTAAAATACAACACCACTAAAAAGGTGCAACAGAATGACAAACCCTGGAAACAAGCAGAGGATAACAAATTGATTCAGCTGGTGAACAAGTTTAAAATTGGCGATTTCATTAATTGGGGAGACGTCGCTAGTTGCATAGAAAAAAGAACTAAACAGCAAATCTATTTTCGATGGATGTACAGCCTTGCCCCTCATTTAAAAAAGGGCAGGTTCACCGAAGAAGAAGACAAGCTTCTAATAGACGCGATTGAAAAGTATggtcttaatttcaaaaaaatatccgCCTTTGTCCTGCCAGCCAGAACTTCCGCTCAGCTAAGCGATCATTATAACACCATCGcaaataaagaagaaaatgtTTGGACTATCGAGCAGGATTCAAAACTTATTGATTTATATCGAGAGTACGGAAATGACTGGGCTAAAATAGCAACTTTTTTTGATTCCAAAGGTAGAGTTCAACTTCGTCATCGATACACAGCCCTCGTTCGCTACAGAAAAAGGGGCTACGATCTCGATGAAATCCCTAGGAACAATGCTAGAGATAAGTCGTTAAGGCAGGGTCTCGTTTTCCAAAAGATCCCAATGAATTCTGTACAAACGATGATTCAACTCAACAGTGCAGATGAAATAGACGACCAAATTCTCGATTATTTTAATCGAATGGTTGCCCCTTCTGTCAGAGTTGGTCGGCCGCAGAAGTTTTATCATTCAAAGGAGGTTGAAGTCCTCACCAAAAAATTATACAACATTCTCCAACAAATGAGTGCTAATCTTAATATTCCCTATGATCTTGACGAGTTCGATTGTATGACAGAAAAAGAAAAACAGCTTCtgacttctttaaaaaattttaattatagtgCAGTCCATGGAACTTTTTCTAAAAAAGTAGAACACACAAGACTCATGATGTTTGGCTCCGGTTCTAAGTCTAGGGAAGAAGGCGGACAAGAAAAGGATAATCATTTTATACCACCTTTACCCTTTGGAACTTGTTCAAAAACCAATAAATTTCAGCAAATGATAAACTGCGAGCCCTTCTTAGATAGAAATATTGTTTGTAACGAAGAAAAGATTTTCGAAACACCTTTTAGTATCATTCAGTTAATTGGCGAGCCCGTAAACAATCAATTTGATAAACTTGGTGAACTTTTCGCCAAACCGAGTTGTGGAACAGGGAAACAAAGATCGAGAAGAATTTATATATTGACGCCTGcagatttgatgaaaaaagaaatacataaACAAATCATAATAGAGAATCGAAATCAGATAGCTCAGTCTGTGCCGAGTACTTCGCGTGCTTCTACTCCAGATGTGACGATTTTAGGTTCTTATACACGTAATAAGCTTGCGTTTAGCGAAACTGAGCTACAAAATTTTCCTGCGGTTAAACCAAATTATTGGACGCTGCTTGGATATCAAAGAATCCTCGATGCGGAAAATGAAATGAAGaataagaataattatttagaggttgacaaaaataaaatgtctGTGAAGGGAAGAATGGCTTTAAACTTATTGCAGGCACGTTTGATACAATTATTTAAGTATCCTATTATTATGTCGCAAATTATTCCACCAGAAAACTTCCATGAAACTGAATTGATTTTTGAATCGCCACTTAAACGGAAAATTTTTTCTAAGGAACCGAGTGAGAAGAAGAGAAGAATCACGTAA
Protein Sequence: MSDTEDQLILEDIQALENALSQKPESHIIPAISLKSEIISDINQTPEVEINQIQLFQNSDSHPAYEEENAIENTDTALQLNQKLIERLTATRNEVAAILEECIRKRAIIDAKINQRLKIVPSTKTLSSNAGMPYFKDKDFFSAPPNEDMKLIQDRGELQIIHLRRVCRWTTKDKEILMKAIQHEIIAELKDLDESEEDAVEKMHLGKSHCLPPIVKKSIGPLGTREFDWMKIAVTDFQNKHSPEECRVMWNIFLHPDINKFKWKKKELEDLEKLVKKYNYQDWDAIAKDLGTQRSGYQCFVKYNTTKKVQQNDKPWKQAEDNKLIQLVNKFKIGDFINWGDVASCIEKRTKQQIYFRWMYSLAPHLKKGRFTEEEDKLLIDAIEKYGLNFKKISAFVLPARTSAQLSDHYNTIANKEENVWTIEQDSKLIDLYREYGNDWAKIATFFDSKGRVQLRHRYTALVRYRKRGYDLDEIPRNNARDKSLRQGLVFQKIPMNSVQTMIQLNSADEIDDQILDYFNRMVAPSVRVGRPQKFYHSKEVEVLTKKLYNILQQMSANLNIPYDLDEFDCMTEKEKQLLTSLKNFNYSAVHGTFSKKVEHTRLMMFGSGSKSREEGGQEKDNHFIPPLPFGTCSKTNKFQQMINCEPFLDRNIVCNEEKIFETPFSIIQLIGEPVNNQFDKLGELFAKPSCGTGKQRSRRIYILTPADLMKKEIHKQIIIENRNQIAQSVPSTSRASTPDVTILGSYTRNKLAFSETELQNFPAVKPNYWTLLGYQRILDAENEMKNKNNYLEVDKNKMSVKGRMALNLLQARLIQLFKYPIIMSQIIPPENFHETELIFESPLKRKIFSKEPSEKKRRIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -