Dros041653.1
Basic Information
- Insect
- Diplolepis rosae
- Gene Symbol
- lola
- Assembly
- GCA_030998225.1
- Location
- JAPYXD010000704.1:14572091-14575070[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 2.6e-05 25.7 0.1 9 40 396 428 395 433 0.87
Sequence Information
- Coding Sequence
- ATGGAGGATGATCAGCAGTTCTGCCTGAGGTGGAACAATCACCAAACTACCTTAATCCAAAACTTCGACACGTTACTAGAATCTGGTACCCTGGTTGATTGCACCTTGGCGGCGGAGGGGAAGTACCTAAAGGCCCACAAAGTGGTCCTCTCCGCGTGCAGTCCTTACTTTGAGGGCCTCCTCAGCGAACATTATGATAAGCACCCCGTCTTCATACTCAAAGATGTTAAGTTTAAAGAACTGAAAGCCATGATGGACTACATGTACAGGGGAGAAGTAAATATCTCCCAAGACCAATTGGCAGCCCTCCTTAAAGCCGCAGAGTCTTTACAAATCAAAGGCCTCTCGGAAAGTAGAACTGGTGGCAATGGTTGCACAAAACCGGACACCAGGCAAACAAAAGTCAGCTCACAGTCGACGGCACCGTCGTCATTAGACATTCCACATGCGTCTTCCGGTCTCACTATAGAAAAGAACAACAAAGTTCCTAGGCAGAGTTTGGCACAGAGCTCTGTAGGTGACCTACCTGAAGACTCTGCAAGCCCCTCTATCCCCAAAGGTCTATCCTCCAGGGAAGGTTCCCAAAGTCCAGTCGGTAGGAAAAGGAAGAGAAGAAGGAGAAGCATAGGCGAAGATACTTCTGTAGAAAACCACGAATCCAACTCTAGTGATATGACCCAACAAGCCAACGTTCCGGCATTGGGAATTGCACCTGTTGCCGATGAGAAATCCCATGCCGACCCCTCCGACTCGCTTGGAAGGTCGGCTCTCATGCAACAGTTAACGAAACCTGCCGACGAGATGCTTCAGCTTCCTGTTGAAAAACCCGAACCTACCGAAGACATGATACAACCAAAGTCTGAGTATTTGGACGACCCGGAGGAGAGTGTGGAAGACTTAACGCTTGACGATGACATGAATGACCTCAATGAAATGGAACAAGATAGTAATAGAGCCGGACCAAGTACCCACGATCCTACCCAACCTCATGGTGGGGGGGCGGTAGCACGGTGTCGGTCAAGAGGGAATTCGGGTGGCGGTGCCCTGTGGGCAACCCATTTCCTCGATTATAAAACGAGTCCGAATACGAGACGTTTGCCATCGGATGTTGACGTGAGCGCGTTGCTTAAGTCGCTAGCGAGTAAGCAGGGTCGAAAATATAGTTTAGATTCGGTTAGAATGTCTCTTGAGGCGATTTTGCAGCAAGGCGTTAGTACCACTCAAGCCTCGGAGATGTACGGCATTAACCGCTCGACCCTGCAATTCTATTTGAAAAAGCTAAACGTTGTCAGGAGACGATGGATACAACCAAGAGCCCCCGTTCGAAAGAGACAATCTTCATAG
- Protein Sequence
- MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESRTGGNGCTKPDTRQTKVSSQSTAPSSLDIPHASSGLTIEKNNKVPRQSLAQSSVGDLPEDSASPSIPKGLSSREGSQSPVGRKRKRRRRSIGEDTSVENHESNSSDMTQQANVPALGIAPVADEKSHADPSDSLGRSALMQQLTKPADEMLQLPVEKPEPTEDMIQPKSEYLDDPEESVEDLTLDDDMNDLNEMEQDSNRAGPSTHDPTQPHGGGAVARCRSRGNSGGGALWATHFLDYKTSPNTRRLPSDVDVSALLKSLASKQGRKYSLDSVRMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWIQPRAPVRKRQSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089692;
- 90% Identity
- iTF_01393655;
- 80% Identity
- iTF_00460921;