Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030998225.1
Location
JAPYXD010000723.1:14432365-14440352[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.6e-25 5.4e-21 76.6 0.0 1 89 231 317 231 317 0.95

Sequence Information

Coding Sequence
ATGGAGCGAACGGAGCAGGACGAGGTACTTACTATATCAGAGAAGGTAGTGGTGCGAGTTCACGACCTTGTGACGTGGTTAGCGCCGTCTTTGGAATGGTCTTGGGGTAGGGAGGTTTATCCGCCGACCCCGTTGTCTTCTCCAGAGAGCTCTCCACTGAAACCCGAAATAGGTCAACCCCAGGTGCTTACTGATCCTGGGATCGACTTCTCTGACGTTGATAAGCAACAGCAGGAGTTTGAAAGTACCCATAACTCTTTAAAACGCTTAGATGGCGGTATACAGACGAAAGTGGTCGTCCTCTCCTATCCTAGATATTGTCGCTATAGAGCCCTTCTTCGAAGGCTCGAAGGATCGGAACCATCCTGGCTGTGCTCTTCGGTAGCAGCGGCTGTAGGCGGTTTCACCGCCTTGCCTGGCACGAGAGTCCTTTTTTGCAGAGACACGTTCGACTATCCTGATCTCGAAACCCACGAACTTCTCTGTAATCACTTAGCACCGAAATTGAAAGGAAGGCCTCgaagaaaacgaaaaaagcgAAGCGTCTCACCTGGTGAATCCAGCAATGAAAGTGAAGCTTCCGTTGCCTCGTCTGTAGTTGCTTCGACTTCCAAAGCCTCTTCGACAAACTCTATAATCAGCGGGTCATCTTCCGCTATAGTGCGTCGAAGCGAACGAAAAGCCAGCGTTGAGGAGAAAAAGTTTCTGTctgatattcagaagtttatgAATTCACGGGGAACACCTGTAGGAAAAATGCCCTTGTTGGGTTATAGGCAAATTGATCTATACCTCTTTTATACTAAAGTACAAACGTTGGGTGGTTACGATTCTGTGAGTTCCGGCCGTCTATGGAAGACGATATATGACGAAATTGGTGGAAACACGGCGTCGACGAGTGCTGCGACGATTACGAGAAGACACTATGAAagGTTGTTGTTACCTTACGAAAGAAATGAAAAAGGTCAAGATACGAAAGTTAGGCCAACTCATGGAAGACGAACGAAAACGAGTAGTTCGTCAGAGGAGGCGATTGAAATTAAGGATGAACCTGATAATGGATATCAAAGAGAAACAACACCTCCAAATGAACCACCTAATTCCACAACAGTGACACCTTCCTTACAGTCAATTCTGTCTATTTCGTCACTACTTCCTGGAGAGAAACCTAGAATGGAAAGTGGGAAGACGTCGTCGTTACGAAGTGTGAGAGTAAAGCCAGAACGCCTAAAATCCCTAAATACGATAATTGCCAGTAGCCCGTCTGCTAGCCGGCAAACCAGTCAACTGCCAAGTCCTCCACCTTCATCGGATACGTCGACATCTACACCGAGTAGTACACCTTCTACAACGCCTACTGGGGGTAGTCAAAGTGTCCTGGAAAGGCAGCTCAATAGTCCCTTAATATCGCAGCAAGTGCCACCACCAAGTTCTCCTCCGGGTTTACCTGTAAGCACCGTGACATCGAACGCATCTGCGGTAGTGACGTTAACGCCACCACCAGAAAAGGACATTAAGGAAATGAAGCTAGACTCAAAGCAAACTACTCTGCTGGCACAGGGAAAAGAAAACATCCCCTTCTTTGATGAAAAACCTATCTTCCTTGATAAGCCAATAGTACAACCAAGATCTCCGGAAGTAATAGATCTTGAAAGTGAGAGTGATACTAGTAGGGATAAGATTATAATTCCTAGTTTCAAAAAACGGAAACTCGAGATTCTTCGGGAAGGTGGTTTGGAGGTTACGCCTGTGGATTTGGACGCTCGACCTACTGTGATTCAACCCAACGCAATTTCCGCACCTATGACAGTCAAATCCGAAGAAAAGTCACTCTCCTTGCCTCCAGCAACCATACCAAATTCCATACCGAAACTCATTTCCCTCACTGTAACACCCGATATAGGCCACATGCTTCCATCTACCCCTGAAAATCACAGTTCCCATCAACAAATTAGGCATCAAACTCCAACAAAGCAACCTACAAATCACAATAGCAACACGTCTCCAAGTAGTAACACCTTGAGCAGTAGAGTAATAAACCTCGGGAATAACTCGAATACGACTTTGCTGCAGCTTTACGCGAATGCGAACGCTGCTGTCTCAAGTGCATCTACTTCGTCATCAGCGAAACACAGATTCGTGGCTCCTACAGTTCCTAACGGAAGGGTAGCTCCTCCTAGAGTAACGCAGTCCAGGTCAATATTCGCACACAACGAGAAGATGGTCTACGGGAACCCTAAAGATATTCTCACTACACCTAAGTATCCACCTTCTCCCCCTGTTCAACCTCCACAGAGGACTGAATCTTCACCAGGTGGAGTTCTTGATCTTACCCAGAAGCCTGCTTTTTTCAGGCCTAGCTTGGAAATTGTCCGAGTGCCAGTTGTCCCGAGACCTAACCCAATCAATCTGGAGACGAGGAACGCACACAACAGGGACAAGACTTTGGAATCACCGAGGAAAGGTCAATTTTCTAACTACGCAGGCATGATCGACAGCAGAACAATGGCTTCGAATAATCTGGAAATCACGCTCGTCAATCCTAAGAAATTGCATTCCAGTTCCCCTCAATTACCGAGTCCACCGACTAGGAATAATACCTCGATGCCAAACCAGAGGAGACAGCAGATGAATGGGAAGTACCCTGTTAGGAGCGAACCAATATCGCTCTACACGCCCAGAAAATCGACGCACCCAGTGATACCCAATGTTCCAAATTTAAGTCAGCTCAACAATGCATCTTCCTTCTCTAGGTCGAGTAATCACCATCATATTGCTGTCGATAAGAGAAAAGGTGTGGAGACTGGAAACGAGCATCATCGCAGAATTAGCGAGGGAAATAAGACCACAATGATGGTGAACCAAATTCAGGAAACGTTGCAGAAGCAGAACGATTCATCCAGGAGACACAGCGTTCCAAATATTCCCTCTGGGTTCGTTCCTGCCATGTCGCAAAATAATGCAGCCTTCTTGGCACAACTGCCTAATAATCCTGGCAAGTTTCTTCCAATGCTGGACCCGATGTACTATCCTGCTTTGTACAACGGCTTCTTCCCTCCACCTATGTCAAATGCAGCATCTTCTCCCTTTTTATCTCCAGAGTTCAGCGCTTATTATAAGGAATTGCTGGCATCCTCTTCGCAACCAAGACTGGGGATGGCGGGACAGCTTCCACCGACTGTTCCGACATCCAAGTAG
Protein Sequence
MERTEQDEVLTISEKVVVRVHDLVTWLAPSLEWSWGREVYPPTPLSSPESSPLKPEIGQPQVLTDPGIDFSDVDKQQQEFESTHNSLKRLDGGIQTKVVVLSYPRYCRYRALLRRLEGSEPSWLCSSVAAAVGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSVVASTSKASSTNSIISGSSSAIVRRSERKASVEEKKFLSDIQKFMNSRGTPVGKMPLLGYRQIDLYLFYTKVQTLGGYDSVSSGRLWKTIYDEIGGNTASTSAATITRRHYERLLLPYERNEKGQDTKVRPTHGRRTKTSSSSEEAIEIKDEPDNGYQRETTPPNEPPNSTTVTPSLQSILSISSLLPGEKPRMESGKTSSLRSVRVKPERLKSLNTIIASSPSASRQTSQLPSPPPSSDTSTSTPSSTPSTTPTGGSQSVLERQLNSPLISQQVPPPSSPPGLPVSTVTSNASAVVTLTPPPEKDIKEMKLDSKQTTLLAQGKENIPFFDEKPIFLDKPIVQPRSPEVIDLESESDTSRDKIIIPSFKKRKLEILREGGLEVTPVDLDARPTVIQPNAISAPMTVKSEEKSLSLPPATIPNSIPKLISLTVTPDIGHMLPSTPENHSSHQQIRHQTPTKQPTNHNSNTSPSSNTLSSRVINLGNNSNTTLLQLYANANAAVSSASTSSSAKHRFVAPTVPNGRVAPPRVTQSRSIFAHNEKMVYGNPKDILTTPKYPPSPPVQPPQRTESSPGGVLDLTQKPAFFRPSLEIVRVPVVPRPNPINLETRNAHNRDKTLESPRKGQFSNYAGMIDSRTMASNNLEITLVNPKKLHSSSPQLPSPPTRNNTSMPNQRRQQMNGKYPVRSEPISLYTPRKSTHPVIPNVPNLSQLNNASSFSRSSNHHHIAVDKRKGVETGNEHHRRISEGNKTTMMVNQIQETLQKQNDSSRRHSVPNIPSGFVPAMSQNNAAFLAQLPNNPGKFLPMLDPMYYPALYNGFFPPPMSNAASSPFLSPEFSAYYKELLASSSQPRLGMAGQLPPTVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00676481;
90% Identity
-
80% Identity
-