Dlae015828.1
Basic Information
- Insect
- Diplazon laetatorius
- Gene Symbol
- znf423
- Assembly
- GCA_963662125.1
- Location
- OY759166.1:5172676-5187854[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.4e-06 0.00073 19.9 1.5 1 23 98 120 98 120 0.98 2 20 0.37 28 5.4 4.0 1 23 126 148 126 148 0.97 3 20 1.2e-06 9e-05 22.7 4.3 1 23 154 176 154 176 0.99 4 20 0.00025 0.019 15.4 0.2 1 23 182 204 182 204 0.99 5 20 6.9 5.3e+02 1.4 0.5 2 23 276 299 275 299 0.80 6 20 0.0047 0.37 11.3 2.8 1 23 372 395 372 395 0.95 7 20 0.048 3.7 8.2 0.0 2 23 406 428 405 428 0.93 8 20 0.25 19 5.9 0.1 3 23 506 526 505 526 0.96 9 20 0.0011 0.083 13.4 0.2 3 23 553 573 551 573 0.96 10 20 0.00014 0.011 16.1 1.4 1 22 582 603 582 605 0.90 11 20 1.4 1.1e+02 3.6 0.2 1 23 610 633 610 633 0.93 12 20 0.012 0.92 10.1 0.1 1 23 740 763 740 763 0.92 13 20 0.00059 0.045 14.2 1.1 2 23 878 900 877 900 0.96 14 20 1.3 1e+02 3.7 0.7 1 12 909 920 909 932 0.76 15 20 1.1 88 3.9 0.5 5 23 943 961 939 961 0.91 16 20 0.049 3.8 8.1 0.0 2 23 1155 1177 1154 1177 0.89 17 20 0.09 7 7.3 0.4 1 23 1187 1210 1187 1210 0.94 18 20 4 3.1e+02 2.1 0.1 2 23 1223 1244 1222 1244 0.93 19 20 0.026 2 9.0 0.2 2 23 1253 1275 1252 1275 0.93 20 20 1.4 1.1e+02 3.6 1.6 1 23 1282 1305 1282 1305 0.93
Sequence Information
- Coding Sequence
- ATGTTGTTCAAAGGCAATAGTTCGAGGTTGGAACTGctgattggaaaaattcagGCGCACAAGGAATCACCGTCGCCACCGAGGGACGAAAAATGCACTGCCAGAACCAAAGATGCTTTGGGCACGAGCAGCTCTTCGTGGCACAGCGAGGACGGTGGAACGAATTCGCGTCGCGGTGGGGTCGAAACCCCATCGTCCTGCGCGACCCCAACATCGGCGAGTTTTCCATCCGAACCCGAGGTCGACACGGAAATTGGCGTAAACGTCGACGTCAACAATCCGGCTGCTCCTTATCCGTGTCAATTTTGCGACAGAACCTTTCCCAGGCTCAGCTATCTGAAGAAACACGAACAgAGTCACGGCGATCAGATGCCTTATCGTTGCAACTGGTGCGCGAGATTGTTCAAGCACAAACGCAGCCGTGATCGTCACGTCAAACTCCACACCGGCGATCGTAGATATCGTTGCACCCATTGCGAAGCCGCTTTTTCCAGAAGCGATCATTTGAAGATCCACATGAAAACACACGACAACCAAAAACCCTATCAGTGCACAGCCTGCTCGCGGGGTTACAACACCGCGGCCGCCCTAACCTCGCACATGCAATCCCACAAGAAGCATCATCAAAATTCCGCCCAAACCCCCAAACAAGAACTCGATTACAATCGTCGAAGCGTATCGTCCCACAGCACAGCGTCCTCGCCCCCAATTCCAAATTCCCCATCGCCCAGTCTCAACCTGGCGCTTCAACAAAAAACCGCCATCAAAACAATCTACCCGACAAACATTCAAAACTCCTCATCCTTGAGTTCATCGCCCAAACTCACTTGCATGTATTGCACCAGAGATTCCTTCACGAACATGCAACAATTGCAAATGCACGTGCAAGCGATGCATCAATCGATATTACGCGGCGAAGGATTGACAATGTCATCGTCAATGATCAACAATCACGATGAAAATCATTCCAACTTGATTGGTCGTTCGAAAATTCGCGACAACGCGACAAAGGTCGAACGCAAAACGTCCAAGGACATCACGTTGATGTTGCATCAACAAAATTCCGGGGACACAACTGTTGATGCGGAAAAATCAAGGTCACCCATTGCCGATCATTGTTGCGATCAAtgtacgatgaaattttccaattcaaaCGCTTTGGAAGATCACGTGTCAACGATACATCGAAACGATGGTTTTCCATCGTCATTGGTCATGTGTCCTCTTTGCGGAATTCCTTGTTCAACAGCCGCAGCCTACGCGGAACATTATTTGCTTCGTCATTGCGAAAACCGTCGATTAACACCGTCAAAACATTCCAATCAAGATTGGAAAGCTTCCTccatcaatgaaaaatccatcgacgCCAAAATCccggaaaattcgtcaacaaagCCACAGGATTACGCGTCAAGGTCGTCAACCGATGTCCCAAGGTCATCGGAACCCGCGGATCTCACAAAAACAACCGACAAGACCCAATCGGACGACAAATACACATCGGGCACACTTTTGTGCAATCAATGTGGCGCGGCCCTCAAAGATTTCGAATCATTCCGCGAACATTTGGCCGGCCATTTGCAAgcaaatcatcatcatcatcaacgtACAACCATTCCCATCGATCCGATCGTCGCCGAACAACCGAAGATCGATTGTCCAAAGTGCGACACGACGTTCAACGAACGTGACGAAATGCTCGCGCATCTGACGAAACATTATTTGGGACGTGTTACCAAAGAATACGTTTGTgaagtttgtaaaaaattttattcacatcCGGATTTGTTGCAACGTCATTTCATCGATTCCCACGCTCATCATCTCTATCGTTGCGCATTGTGTCGCGATACTTTTGATTCGCGGGTCGCCATGCAGGTGCATTTTGCCGTTAAACACAGTCAGGAGTGCAGAATTTATCGTTGCAACGTTTGCAGCGTCGGTCACAACAATGACGATGCGGCGAACGACAACAATGGCAataattgtggaaaaatttattttcgcaatGAATTGGAAATGGCCAATCATGTGAAGATCGTTCACGCGCCTGCGCTTAGCAATCGTGGAAGTGAGGTTATCGCTACGATGCCCAAGAGTCGGGAAACAACGACACCCGTGCCTATTTCAGCAACTGCGAGATGCGTTTTTTGCGGTATTTGTTGCTGTTCGGATTTGGAGATGCAATTGCATCTGGCCAGTCATGGAACGAGTTTGTATCGTTGTCCGATTTGTCGGGAAGCTTTTCCCGTGGAATTTTTGTTGGATCGTCatgtcgcgcatgcgcatcgcAATAACAGCGAGAGAAACGATTCGCGGGAGAACGGAAGGAATCATCGTAATCAACGATTGACCGACGAAACGACGAGAGCCCAAAAGCGCGGAAGATCACCGGCATCGAGCAACAACAATTCCCTGAATCAAcgcgacaacaacaacaaacgacCGAATTACAACACAACGACAAACGGTGCAATTCCAACATCGCGTCAACGTTGCGAACTTTGCGAACACGCGGAATTCGCCACGGACATGGAACTCCAAGCccacaaaaaattgattcacacCCCGCAAAAACAgcaatcatcatcgtcatcatctgCGAAATCATTAACCACATCGTTGAGCATGACTTGCGCCTATTGCGGTGAAATATGTCGTTCGCGAACGGATTTGGAATCGCACACGAGAATTCAACACGCGGCTAACGAACCCGGTGGACGTCACAAATGCAACATATGCGACGAAGTTTGTCCATCGGGTGGAATTCTTGCGGAGCACAAGCTTCAAAAACATTGCAAGATACAACAGAGCGACGTTTGCATAATGTGCAGAACTACATTGACGAGCgagacaaattttttggaacatTTGCAACGTCACAATGCGGAAAATACGGATGCGCAACGTAATGGGGaggcgacgacgatgacgtcaCTTCCGGCAGGTTGCGTGGTTTGTCGTCAGACGTTGATGAGCGATTTCGAGTGTCGTTTGCACGCTCGTCATCATTTGCGGGGGTTGATAGACGATTGCCAGACGAGTGGGACGTCGGTGGGGAGTCCGATTCGTCGAACCAATCAACAGCATCAACAGCAGctgcaacaacagcaacagcgaCAATCGCCGAATCAACGAACCGTCATGAGCTGTTGTCTGTGTCTTCGTGAATTTGGGGCTGATGATTTTGTCAGTTTGCCGTCGAATCCCAATGTGATTGGGGGACCCTCGTTGAGAGTCTGCAAACCTTGTTTCGTGAGACACTCGCAGGGTTTGCCAATTTTGAGCTCGCCCTACGAACACGCCAGACCGGCGAAGAGCGAGATCGGACGTTGGTCCGTGAACAAGGACGGAAGACATTGGGATGGCGATTGGGGCGACAATGGCGAGGGATTTGGGAAACATGAGAATGATAATTCGAAGAAAGGATTGAtgaatgatgataaaattggGGATGGAATTAGATGCGAGGATTGTGGAATTAAATTTGAGAGTAACGAGGAAGCGGATGTTCATAGGATCAACGAACACAAGAACAATTATGGAAGCGTCAATGTATATAGCTGCATACAGTGTCAGTTGTCTTTTCCGACCGAGGACAAAATTCAGCAACACGTGAGAAAGGAACATTTGGAATCGCCGAGCAAGGCAACGATGGACGCGTTGCGTTGTCACTTGTGTGTTTACGAGGCCAACAGCCCTTTGCAACTTCAGGGACACTTGATCGAACACACTTTCGCCGGTTGCGCCGGTCTCACTTGCTACATGTGCCAAGCACTCTTCACCACTCCCATGGCTCTGCAGAATCATTTGCTGCAACAACACGGACTCGGCGCCCGGCCCTACGATTGCGACAATTGcaggttgaaatttttttttcgcatagaATTGGATCATCACACGGTGATGGTTCATCGTCGAACGGATGCGAATTCGTCACCCGGAGCAGCCGGTCGCGagtcgacgatggaaaaaaaaccgatcgaCCAGACGACGGAAAATCACAAGgacgacaacaacgacgatgatCATCGTCGTTTGGACGGTGTCACGATCAAGGAAGAAGTTGCGAACAGTCCGGAAAACGAGGACGTCAACGTGGACGACGGCCACGTGGATCGACCACCCGGTCACCTTAACTCCGAGCACGAAACCAATGACAACCACGTCGTAGACGCGAAGAAAGAATAA
- Protein Sequence
- MLFKGNSSRLELLIGKIQAHKESPSPPRDEKCTARTKDALGTSSSSWHSEDGGTNSRRGGVETPSSCATPTSASFPSEPEVDTEIGVNVDVNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHHQNSAQTPKQELDYNRRSVSSHSTASSPPIPNSPSPSLNLALQQKTAIKTIYPTNIQNSSSLSSSPKLTCMYCTRDSFTNMQQLQMHVQAMHQSILRGEGLTMSSSMINNHDENHSNLIGRSKIRDNATKVERKTSKDITLMLHQQNSGDTTVDAEKSRSPIADHCCDQCTMKFSNSNALEDHVSTIHRNDGFPSSLVMCPLCGIPCSTAAAYAEHYLLRHCENRRLTPSKHSNQDWKASSINEKSIDAKIPENSSTKPQDYASRSSTDVPRSSEPADLTKTTDKTQSDDKYTSGTLLCNQCGAALKDFESFREHLAGHLQANHHHHQRTTIPIDPIVAEQPKIDCPKCDTTFNERDEMLAHLTKHYLGRVTKEYVCEVCKKFYSHPDLLQRHFIDSHAHHLYRCALCRDTFDSRVAMQVHFAVKHSQECRIYRCNVCSVGHNNDDAANDNNGNNCGKIYFRNELEMANHVKIVHAPALSNRGSEVIATMPKSRETTTPVPISATARCVFCGICCCSDLEMQLHLASHGTSLYRCPICREAFPVEFLLDRHVAHAHRNNSERNDSRENGRNHRNQRLTDETTRAQKRGRSPASSNNNSLNQRDNNNKRPNYNTTTNGAIPTSRQRCELCEHAEFATDMELQAHKKLIHTPQKQQSSSSSSAKSLTTSLSMTCAYCGEICRSRTDLESHTRIQHAANEPGGRHKCNICDEVCPSGGILAEHKLQKHCKIQQSDVCIMCRTTLTSETNFLEHLQRHNAENTDAQRNGEATTMTSLPAGCVVCRQTLMSDFECRLHARHHLRGLIDDCQTSGTSVGSPIRRTNQQHQQQLQQQQQRQSPNQRTVMSCCLCLREFGADDFVSLPSNPNVIGGPSLRVCKPCFVRHSQGLPILSSPYEHARPAKSEIGRWSVNKDGRHWDGDWGDNGEGFGKHENDNSKKGLMNDDKIGDGIRCEDCGIKFESNEEADVHRINEHKNNYGSVNVYSCIQCQLSFPTEDKIQQHVRKEHLESPSKATMDALRCHLCVYEANSPLQLQGHLIEHTFAGCAGLTCYMCQALFTTPMALQNHLLQQHGLGARPYDCDNCRLKFFFRIELDHHTVMVHRRTDANSSPGAAGRESTMEKKPIDQTTENHKDDNNDDDHRRLDGVTIKEEVANSPENEDVNVDDGHVDRPPGHLNSEHETNDNHVVDAKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -