Basic Information

Insect: Diplazon laetatorius
Gene Symbol: RREB1
Assembly: GCA_963662125.1
Location: OY759152.1:8991126-9003871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0041 0.32 11.6 0.0 1 23 50 72 50 72 0.98

2 16 0.00012 0.0091 16.4 0.3 1 23 86 108 86 108 0.98

3 16 2.5e-07 1.9e-05 24.8 1.3 1 23 114 137 114 137 0.98

4 16 0.59 46 4.7 0.1 1 23 239 263 239 263 0.89

5 16 0.075 5.8 7.6 3.0 2 23 269 291 269 291 0.95

6 16 8.8 6.8e+02 1.1 0.6 1 10 349 358 349 367 0.91

7 16 4.2 3.3e+02 2.1 0.0 1 23 484 506 484 506 0.95

8 16 3.1e-05 0.0024 18.2 0.3 1 23 515 537 515 537 0.98

9 16 0.002 0.15 12.6 2.9 1 23 543 566 543 566 0.97

10 16 0.0005 0.038 14.4 3.0 1 23 991 1014 991 1014 0.97

11 16 0.00071 0.055 13.9 0.1 3 23 1343 1363 1341 1363 0.97

12 16 0.99 77 4.0 6.5 1 23 1369 1392 1369 1392 0.97

13 16 0.02 1.6 9.4 1.8 1 23 1450 1474 1450 1474 0.95

14 16 0.34 26 5.5 4.7 1 23 1643 1666 1643 1666 0.97

15 16 0.012 0.94 10.1 0.4 2 23 1729 1750 1728 1750 0.94

16 16 1.4 1.1e+02 3.5 8.2 1 23 1756 1778 1756 1778 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0041	0.32	11.6	0.0	1	23	50	72	50	72	0.98
2	16	0.00012	0.0091	16.4	0.3	1	23	86	108	86	108	0.98
3	16	2.5e-07	1.9e-05	24.8	1.3	1	23	114	137	114	137	0.98
4	16	0.59	46	4.7	0.1	1	23	239	263	239	263	0.89
5	16	0.075	5.8	7.6	3.0	2	23	269	291	269	291	0.95
6	16	8.8	6.8e+02	1.1	0.6	1	10	349	358	349	367	0.91
7	16	4.2	3.3e+02	2.1	0.0	1	23	484	506	484	506	0.95
8	16	3.1e-05	0.0024	18.2	0.3	1	23	515	537	515	537	0.98
9	16	0.002	0.15	12.6	2.9	1	23	543	566	543	566	0.97
10	16	0.0005	0.038	14.4	3.0	1	23	991	1014	991	1014	0.97
11	16	0.00071	0.055	13.9	0.1	3	23	1343	1363	1341	1363	0.97
12	16	0.99	77	4.0	6.5	1	23	1369	1392	1369	1392	0.97
13	16	0.02	1.6	9.4	1.8	1	23	1450	1474	1450	1474	0.95
14	16	0.34	26	5.5	4.7	1	23	1643	1666	1643	1666	0.97
15	16	0.012	0.94	10.1	0.4	2	23	1729	1750	1728	1750	0.94
16	16	1.4	1.1e+02	3.5	8.2	1	23	1756	1778	1756	1778	0.98

Sequence Information

Coding Sequence: ATGCCGATTGGCTCGGGTGATTCGAACGTTGTAGccacgacaacgacaacgacaacagCTGAGGACCGATCGGACGATCGACACAGCACCGAGACACACACAGATGCAGCATCATCGCCACTGGGAACGGATCAACAGGACGTAACATATCCGTGTCCAGCTTGTCCGATAGTACTGTCAAGCCCTCGCGAACTATCGAATCATCTTCGGGGTCACAATTCGCCCCGTAGCACGGATTACAGCGGCGAGGACGATTACACGTGTGGGGTTTGTCACAAAGTTCTGAGTTCCGCAAGCTCATTGGACCGTCACGTTCTCGTGCATTCCGGAGAACGTCCGTTCAAGTGCAAATACTGCGACATGGCTTTCACCACAAACGGCAACATGAACAGACACCTCAGAACCGCTCACGGTGGTCTATCACCCCGTGAAAACGGTTACACGGATTCCGAAGCGAGCAGCGATTCCGACAAACCCACGAACAAACGTCGTCACGTCGAGGAAGAatacaacaacaatgaaataacaaaaaccaCAATTTCAAATACcatcgaacaacaacaacaacaacaacgtgaATCCACGACATTCGTGGCAAAACGTAAATGTCCGGATTTAACGGAAATGGACattgaaaatccgaaaaaacacaaaatactTCTCGGCAATTCACGAACCGAGATAAAATCCGCACCAACGGAATCCCAAACTTCGCACAATTGTCCGGTATGCGGTAAATTGGATTTCGCGACAATCGCGTTGCTCGAATCGCATTTGGAACGCAATCATCCGCAATTTCCGGCAAAGTGTGAAACCTGCAATTTATCGTTCAAAAATCATCGTGTACTGAATCTACATCGTTTCATGATACACTACACCGAAAATCCATACGCAACCAACAACAATCCACGAAATTTGCGTAATTCCGTGGTGGGTTTTCACGATTTGACATTCGTGGATTTTTCATCGGACAAATTTCCGGCAATTGCGCGTGCGGTTTGCGAACAATCGTTGCATCGTCCGGCAACCGGTGAAATCACGACGTTTCAATGTAACAAGTGTTTACGAGCATTTCCATGTCGCACAGCCGTTGACGCTCACGAATTGGATTGCGGTGTGACAAATTCGCAAATTCGCAATTACGTAGACGATTATTCGCGtcgtgacgattttttcgcGGGTTTGGATCTGCAGAACAAAGCGGCGATGACCGAGGCCAAGGATGGCAAAGATTTGGCTGACATACAGAGCATAATATCGGTTACATCGGGACCgatattgcaaaattttccgCGTTCGGATGCGAGCACGCCCGAGCATCAGATGAAGATCAATCCAAACGTTGGATCGTCGGGTTCGTCGGGCACACCGTCATCGGAGTATCATCAGGAGGAAGAGGCTCAGGACGCTTTTGCCGCGGAATTTCGTAAAATGAAGTTAAAGGGCGAATTTCCATGCAGATTGTGCATAGcggtttttccaaatttacgAGCATTGAAGGGACACAATCGTGCGCACATGGGTGTGGGACCTGGCATGGCTTATCCCTGCAACATGTGTCCCTACACGAGTACCGACAAAGCCACCCTAGTGCGTCATTTGCGATCTCACAATGGCGATCGTCCGTTCGAATGTTCGTTGTGCAATTACGCATTCACGACAAAAGCCAATTGCGAGAGACACGTGCGCAATCGTcatggaaaattgaatcgcGAGGACATAAAAAGCGTGTTGATTTATCATCCGAGCGAGGATTACACGAACGACGGTTCGCTCGATAGAAATTCCTCGCCCCGAGGAAATCGCGAAGACGCTAGAAAATCGTTGGTCTACGGCAACGAGAGAGACGAATTTTCGCATCATCAATCGATTTACGGAATTTCGACGATGGACGGCAACAAGAACGATGCGGAAACTACGTCGGACGATGGTCACGCGTCTTTTACGTCGCGTCCTTTGGGCGTGCAAACCACACCCCGTGGAAATTCGTCGATCGGCCATTACGAAAGATCGGAAAGTTTGACGAGAACCCCGACGAGAGGTTCCCAATCGATTGACGCCAATACGCTTCAACGTTTTTCACGCAATTACGAACGACGGCATCACGATTTTGTGAATAATTCGGATTACAGTGGTaaacacgacgacgacatGGATTCAAGATCGTCCGAGGACGAAAGTGCATCGTTGATGAGCGATGGAAAATCGGAAATCATTCATCGAACGACGGAACCGAGTCCCAtggatttgaagaaaaattctaCGGTCACCGCGGCAACGACGATGCGCAACGACGCGACCAGCGTCACGGCGATCGGCGAAGACGCGCCTCTGGATCTCACCATGGACGTTTTGGATCTAAgcaaaaaatcaaagacccAGTACGTAGCTCAGGAATCCATTCGCGCGAATTCGGACGATGTTGGAAGAAATCATAAAGAATTTTACGACGCGAccaatcaatttttgttgacCCAAGCGTTGTTGAAAGCCGGACAAGCCGGTGGCAATCCGTCGACGACCATCGAAGCCCTCTACGCCGAGGCACAATTGTTGTGTCGTAATTTCGGTGGTTTCGCGGGTAACAACAATGCACCCGGTATATTGCCCCCTTACATGTTCAATCCACACGTTTTCGGTCAGGATTACGCGATGAAGGAACGTTTGCAAAAAGAATTGGTTCGAGGATTGCAATTGACGAGCGGTGGCACACTCGTCGAACCGACCATCGTTAATTCAACGTTCACCGGTGCTTACACACCGGCCCGCGAAATAATTCCGCACAACATAAACGAACAAACGGATTACGGTAAACAACTAATGGCTGCCAAATTGcccaacaaaatggcggccgtaagtacgcgtgaaaaaatggataattCCGGATCGTCGAATTCCGTGAAAATGGTGATTAAAAATGGTGTATTGATGCCAAAACAGAAACAACGAAGATATCGCACGGAAAGACCGTTCACTTGTGAACATTGTTCGGCGAGATTCACGTTGCGTAGCAACATGGAGAGACACATAAAGCAACAACATCCGCAACATTGGAGTCAGAGACCCAGAGGCGGTCATTCGACGAGAGGACGACCACCCGCAAATCCACCGACTTTGGTCgttaataacaacaataattcggGATTGCAACAATTGTCGCAGAATTATGCGAATATCGTGCCGAAAATCGGTCAGAATGCGAATTCGGGATTGGGTTATGAGAAACACGCAATTTCCGATCATGTTAAATACGCGATACTCGCCCAACACTTGAAGGCCAACAAAATGGAGGAAATTGACACGGAGGAGGAATTGGTTATCGACGAAGGTGGTAATGAagttggtggaaaaaaattgggattgGAAATGCAACGTCCGACGAGTTTGTTGAGAGGCAAATTGGAGGGTAACGATTTTTACAAGGATGACAATGTTAGGAaatcaaaacaacaacaacaacaacaacagcctCAACAACAgcctcagcagcagcagcaggagtCCGTGGAATCagtgacgaaaaatgttgtgaagcACGACgaagacaacgacgacgattacGACGAAGTCGTCGAGGAAGCCGATTGCTCGACCGACGATTATTCCACGATCAAGATCAAATCCGAACCCAACGACAACAATCACGACGAAGATTCCAAAGATTACGGACAAACGAGCAACAACAATCccgaaacaacaacaacaatcaaaGAAGACGATCAATGTTCGAACGACGACACGAgcgaaaaaaacgacgacggTACGGTAGATTTGGCAAGCGTATCCGAATTGTTGGACAAAGCGTCGCAACAGTATCAACAATTTCAACCGCAATACATGAGCGACGAGGAGGGTTTGGTCGCGTCAACGAGCGATTGCAACAATTCCGGTAGCGATGAAAAATCCGATTCCGTTAATTCCGCAAATTCCGTTAATTCGAATTCATCGAAAactaagaagaagaagaaaaagaagaagaagaagaagaagaaatcgGCATATTCGATGGCGCCCAATCGCGTTATTTGTCCTTATTGCGAAAGACCGTTTCCATGGACTTCGTCGTTGAGACGTCACATACTAACTCACACCGGACAAAAACCTTATCAGTGCATGCACTGCTCGTTATTGTTCACGACCAAATCCAATTGCGATCGTCATCTATTGcgtaaacacaaaaataatgccaataaaattcgtcgaatgagAAATTCTTCGTCACCGGAAACTCGCGAACAATCaaccaacaacaataacaacaacaacaataataacaataacaataataacaacaacaataataacaatagcgTGGCTTTTGCGATGAGAAACGTGCCCGAGAGACCTTACAAATGCAATTTGTGTCCAAGCTCGACTTTCTCGACTctgggaaatttgaaaaaacacaaATCTTCGAAACACTCGAGAGGTTATAAATCCAACAGGCCAGAATCACCGGTTACCAGTGAGTCGCGTAACAGTCCGTCGGTTtgcaacaaacaaaacgatcaGAGCGGTTACGATAGTCAATCGTCGGGTATGTCGGACGTTGCCGATCAACCGGACAACATGGACGTCGTGAACGATCGCAACGAATCGACGCCGATCAACAGTGTTGACGCGACGGTCAATGATAACGTCGATACGCAACGAACAACGACGAAGATGGAAGTCGCCGTTGAAACGGACGATATTATCGTCGAGGAAGACGATAATAATGCGGAAACATCGACGTTCACGggtgcgaatgaaaatttcgaacgttcgaacgacaacgacaatgCGGAAATCGCGGAATCCGCGTCATCGACgttggacgaaaattcgacgaaaatggCGGACAACAGTGCGAGTGTGGGGGTCGGGGAAAGTGCGAAATCGCGAAGACCGTCGCCGAGATCGTCACCCGGTCCCACAGACGCGCCATTCAAGTGCCATATTTGCGACAGCGGATTTTCCGAACGTCACGAGTGTCTCGAACACATTAGAATCAATCACACGCGTTCTTACGAGATACTCGTGGCCAAGGGAGCTCTGGACATGGACATCGATGGAACGGAggaacagcagcaacaacaacaacaacccccACCACCGCCGCCACCGGCCGTGACGACGTCGCAACATCACAGCGATGGCGAAGAAAAACGCGGCAGATTTCCGGATTATAGCAACCGAAAGGTGGTTTGTGCATTTTGCATGCGTCGTTTCTGGTCGGCCGAGGATCTTCGAAGACACATGAGAACCCACACGGGCGAGCGGCCGTTCTCGTGCGACATATGTTGTCGTCGTTTCACATTGAAGCACAGCATGCTTCGACACCGCAAGAAGCACGAATCCGTGGATTCGTCGATGTACGTTGGAACGAGCGGCGACGAGGATACCGTACCGGCCGCCCAACCACCGACGATAACACCCCGTAGCCAGCAACAAAATCACGGTTCAACGTCGACCATCGGGGAATCGAGGATCCAAGATAGAATCTCATCGTTGCCCACCGTGGCGACAGTGGCCACGGGCGATGCCGCACCGAGCGGTCTAATGCGTTACAACCCTTACGATAAACTCACCACCCTCACCAACAAACTCGCCAATGcccaacaaaattttcattgtcacgATGTGGCCGATAACGAAAACGATCTCATCTCGAATCTTCTCGGTATAAGGGACAAGAGCATTATCGACAAGGTGCTTCAAGCATCGGCCGACGACGCGGCCAAACTTCTCGGGGTTAATCGTAATCACGACTGA
Protein Sequence: MPIGSGDSNVVATTTTTTTAEDRSDDRHSTETHTDAASSPLGTDQQDVTYPCPACPIVLSSPRELSNHLRGHNSPRSTDYSGEDDYTCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGLSPRENGYTDSEASSDSDKPTNKRRHVEEEYNNNEITKTTISNTIEQQQQQQRESTTFVAKRKCPDLTEMDIENPKKHKILLGNSRTEIKSAPTESQTSHNCPVCGKLDFATIALLESHLERNHPQFPAKCETCNLSFKNHRVLNLHRFMIHYTENPYATNNNPRNLRNSVVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPATGEITTFQCNKCLRAFPCRTAVDAHELDCGVTNSQIRNYVDDYSRRDDFFAGLDLQNKAAMTEAKDGKDLADIQSIISVTSGPILQNFPRSDASTPEHQMKINPNVGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCIAVFPNLRALKGHNRAHMGVGPGMAYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLNREDIKSVLIYHPSEDYTNDGSLDRNSSPRGNREDARKSLVYGNERDEFSHHQSIYGISTMDGNKNDAETTSDDGHASFTSRPLGVQTTPRGNSSIGHYERSESLTRTPTRGSQSIDANTLQRFSRNYERRHHDFVNNSDYSGKHDDDMDSRSSEDESASLMSDGKSEIIHRTTEPSPMDLKKNSTVTAATTMRNDATSVTAIGEDAPLDLTMDVLDLSKKSKTQYVAQESIRANSDDVGRNHKEFYDATNQFLLTQALLKAGQAGGNPSTTIEALYAEAQLLCRNFGGFAGNNNAPGILPPYMFNPHVFGQDYAMKERLQKELVRGLQLTSGGTLVEPTIVNSTFTGAYTPAREIIPHNINEQTDYGKQLMAAKLPNKMAAVSTREKMDNSGSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLVVNNNNNSGLQQLSQNYANIVPKIGQNANSGLGYEKHAISDHVKYAILAQHLKANKMEEIDTEEELVIDEGGNEVGGKKLGLEMQRPTSLLRGKLEGNDFYKDDNVRKSKQQQQQQQPQQQPQQQQQESVESVTKNVVKHDEDNDDDYDEVVEEADCSTDDYSTIKIKSEPNDNNHDEDSKDYGQTSNNNPETTTTIKEDDQCSNDDTSEKNDDGTVDLASVSELLDKASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSVNSNSSKTKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPETREQSTNNNNNNNNNNNNNNNNNNNNNSVAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGYKSNRPESPVTSESRNSPSVCNKQNDQSGYDSQSSGMSDVADQPDNMDVVNDRNESTPINSVDATVNDNVDTQRTTTKMEVAVETDDIIVEEDDNNAETSTFTGANENFERSNDNDNAEIAESASSTLDENSTKMADNSASVGVGESAKSRRPSPRSSPGPTDAPFKCHICDSGFSERHECLEHIRINHTRSYEILVAKGALDMDIDGTEEQQQQQQQPPPPPPPAVTTSQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSSMYVGTSGDEDTVPAAQPPTITPRSQQQNHGSTSTIGESRIQDRISSLPTVATVATGDAAPSGLMRYNPYDKLTTLTNKLANAQQNFHCHDVADNENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -