Dlae002468.1
Basic Information
- Insect
- Diplazon laetatorius
- Gene Symbol
- ZFX
- Assembly
- GCA_963662125.1
- Location
- OY759153.1:15240393-15251718[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1e+02 3.6 0.1 3 23 18 38 17 38 0.94 2 15 3.4 2.7e+02 2.3 3.8 1 23 978 1001 978 1001 0.81 3 15 0.0054 0.42 11.2 0.8 2 23 1092 1114 1091 1114 0.95 4 15 0.00082 0.063 13.8 0.3 2 23 1127 1148 1126 1148 0.97 5 15 2.7e-05 0.0021 18.4 1.4 2 23 1151 1172 1150 1172 0.97 6 15 0.0075 0.58 10.7 0.3 1 23 1178 1200 1178 1200 0.95 7 15 2.7e-05 0.0021 18.4 4.5 2 23 1207 1228 1206 1229 0.95 8 15 0.12 9.2 6.9 3.7 5 23 1242 1260 1241 1260 0.97 9 15 2.4e-05 0.0019 18.6 1.5 3 23 1267 1288 1266 1288 0.97 10 15 0.014 1 9.9 0.5 2 23 1304 1324 1303 1324 0.97 11 15 7.3e-05 0.0056 17.1 0.7 1 20 1330 1349 1330 1352 0.92 12 15 9.1e-05 0.007 16.8 2.7 1 23 1360 1382 1360 1382 0.99 13 15 0.0025 0.2 12.2 3.2 1 23 1388 1410 1388 1410 0.97 14 15 4.6e-06 0.00036 20.8 3.9 1 23 1416 1438 1416 1438 0.99 15 15 0.00033 0.025 15.0 7.2 1 23 1444 1466 1444 1467 0.96
Sequence Information
- Coding Sequence
- atgGATCTGGGTGCGAGTAACAACGcaggcggcggcggcggcaccGTCGCCTGTCCGGTGTGTACGTTGTATCTGAGAGAGGGCATCAGCCTGCAGAGACATTTGGACACGCATCCGAAGGAACAGGTTATAGAGGCGCTCATCAAAGCGagttcgtcgtcttcgtcggcGTCGGCTCCGTCCGCTAGGTTAACTCCGACGCCGCCGATCACCACGACCGCGACGACTGTTCTGTCGGCCGGTGGTTCGTCCAACAACGGACAACCGACGACGAATTCGGGCGGTGCATTGTCGTCGCAACCGCCCTATCCCATGGGTCCCATATTCGAATGTCCGCCGGCCATAAATACCATGATGCCGCCGCCGCCTCAATTCGCGTCGTTCAGTTATCAACAATTCGTGAACAACGGAACTATGATGATACCACAGTACGCGATGGCGCCGCCTCAAGCCAATCAGATGATGCAAATGCTTTACAATCCTTACGGAATGTATCAGCAGCAACAGATACCGACGATACAGATGCTTTCGCCCATAGCGGCCATTCCCACGGCCAGAATGAGGCAGGTTGTGTCGGTGGGCGCCGATTCGCCGTCCAGGAACGTCGTGACGACCAACCCAACGGGCGACAACAAACAGATGAGCAACGACTCGACGGACGAGGCGGAGGCCGAAAGAATATTGCCTGACATGGAACCCGAATCCATGGCCGAggcgaacgacgacgaagcgtCGCAGGCGCGCGACGACGCCAACGACGCGACCGGCTGCAGAATGGAACACAGGGAACAACAGACTCAGGACGGTTTGTTGCGCAGATTGAATTGCGAACGTCGTGATTTCATGGATTCGCGACATCTGGACGgtgaaaattgcaaaacggcgaacgacgacgacgaagaggcGGAAAGTATATTGCCCGATTTGGAAGACAGAGATTCGCAATTGGATTCGCAACCGCTAAGCAGAGCGACCGAGTTCGAGGAGAGagaagctgctgctgctgccgccgcTGCTGAGCAGTTTGCGCAGCAGGCTTACGACGGTGACATGGAAAAAATGGGTTCGGGCGATGCGGAGGGAGACGACGCCAGGGCGATAAAGATGGAGGGCGATGGGATTGCGGATTGCGCAGACGTTACGGACGACACGTCGCGAGCTGCGCGACGACACAACCAAATGGAAAAGACTAAGAAGACGGTCGGCGAGACCGAAGTCAAGAGACTGGAACATTTGTCGGTTGGGACAATGGGATCGACGTTCGACGGGGCCCATGGGAAAACGGACAAGGACGCGACGAAGAAGAACGGTCGCCAGGAGGACGCagccgacgacgaagaagacgacgatgcTGAGGAAGACGAAGAGGAGCAACAACCGCTGCGACAACAGTCGCAGGACAGTTCGAACGTCGAAGATACATCTACGCCGGACGAATCGACCGGGGACAAAATGGAACGAcctgaaaaaatgtacaccgACGAAATCGTCGAAGAAGCGATAGCCGGCGCAATCGCCAACGACAACGTCGAAACCATCGACGAAGTCCAAGGCGTAACGACCGACGCTTATCGTTACAGATGTAGCTCGTCGGTTCCCTGTTCGCCCAcggctacgaaaaaaatttacagaaCTTGTTCGGTAAGATCGTGGTACGGTTCGAAcgataatttcaatttgtatTCCGTTGGATTCGAAACCGTCGGTCTGCAGGATCCGGATATGGACGACGATATGAAACACATGGAGGACAATTTGGACGAGGAAGACATGGAACTCGATGATATTCCCAATTCCCACGCGAATTTTACGAAACAACACGATAACACGAATCCCATGAGATCTCACAGTCGTACATCGGTGATAAGCGCAATTTCCGGTTTGAGAGTTCACGACGATCGGGTCAAAGCTTGTTCGCCTGAGTTTGCCAACGATTCGGGACACGCGGATGCGGTCGAAGTGGCGGATGAGGATCGACGAGATGCAGCGCCACCGCGGCACAAACGCGAACCCGAAGCTGAAGAGGGCGTCGAagacgaggacgaggacgacgatgaggacgacgacgaggattacgacgacgatgacgacgacgacgacgacgacgatgaaatgaTGAATTTTGCCGATTGTTCGATGAAACAACACAATCAAGATTGCGGGCTAAACGTTGATGAACAATTGAAATCCGAATCGTTGAAAACAAGTCCGATCGATAATTTCGAACGTAAATTCGATTCCAACGAAATTTATCATCAATCGGTGATAACCGAACACGTTAGTTCGTTTCCCACGATAAATTCTCAACAATCGATGatcattcatgaaaattatttgaacgccaatgaaaaatcttcgaacGATAATATGATGAATATATCGGAATTCGTGGATCCGACGACGAGCGCCGAATCCGCGAGCTTTCGGGACAGCAACAAAATCGTTAATCAACATTTACCGTCTACCGAACTTTTGAATATAAACGAGGACGCTCATGCGGGACCGATGAACGTTTTTGAATTCGACGGTCTTCAAATTTTAGTTCCTAGTACATTCATAAGCGAATCGTCGCAAAAAGCCATAAGCGCGACCAGCCGACAATCCATGGCGAGCAGCGAGGGCGGAATCGGCATCGACGAGGAGGTCAAGAGCGTTAACATGCGGGCCGACGAGACCATGCCGCCACGCGGCGAATTGTCCGAACAAGAGAGCAACGGATGCAACGAACCTTCCGCGTGGCAGTTGTACATGGGTCAAGAATCGTCGCGAATGTCGACATCGTACGATCTGATGGCTCGCGAGAGTTGGGAAGAATCCGAGGGTTCGGACAACGAGACGGGAGTGCCACTGCTTGACAGTCGTTCCCTGGCCACGCATTTCACGTCGAGCCTGTTTCTCGATCGCGATCGCAAAACCCCGACTAAACGTACATTCAAGTGTTCCCACTGCTCGGAGGTGTTCGACTGTCCGAAGGAGCGTCGCGTTCACAGCACGACCGTTCACAAGGAAGCCGGGCCGAGTTCGAGCGCCAACAATCATCCGACCCACGAACAATCCGACGAAACCAAGGACATAAAATTGCTCGACGGTCGTATGAACGCTTTCGACGATATATTCGTGTCCGGTATTCACGTGcaacaaaattatcatcatcatcaacaacCTTTGTTGCACCAATTGCAACCGCCCCAACAGCCCGCGGATCCGACAAAATCGGAAACCGAACAAAAAATCGACGGCGGTCTGTCGtcgatgacccaaaatttggaaataagTTGCGCAATGTGCAGTCAACGTTTTACGAGCGAAAGATCGTTGCAGATGCACAATCGTCGGGTTCACGGTACCGAAGTGGCTCGTCGTCTTCAAGAAATTTCCAAATGTCAAATTTGCAACGAAGAATTTTCCACGGTTATGCTCTTCAACGCGCATTTGAAGATACATCCGCTCGAATGCGCTCAGTGtggtaaatatttttatcgtaaaccGAATTTCAAGCTGCACATGAAACGACATTTGGGAATAAAACCGTTTCCATGTACCATATGCGACAAAGCATTtttgacgaaacaaaaattggacGAACACACAAACGGTCATACGGGCAACGCACCCGTCAAATGCAATTTGTGCAACGAAACCTTTCGACGTTATTCCAATTTGACGCAACACAAAAATCGTCATCATTTGAATATAAAACGCAAATTGAAGGATTACATATGTCATTGCGGCGAAGtttttcatacgaaaaaaaaattggcctgGCACAAAGAGACCCACGATGAAAAACCAAAAGCTTGCACGTATTGCAACGAAAGATTCATACACATGGCCAGTCTGACGAGACACATGAGACGCGCTCAcaatcgtcgtttcgttcCCGATGCTCATCGCGAGAGCGAAAACGTCGAATGTCCGATATGCAAATGCATTTATTTGCGTTCATCGTTGTCCGTACACATGAGAGTTCACAATGGGGAACGTCCGTACGAGTGTCAAGTTTGTTCGAAAGCATTTAGCACCAAATGGAATTTACAATTGCACAAATGGACACACGCCGCACGCAGCACCAAACCATTCAAGTGCAATCAGTGCAGCGCCGCGTTTTATCGTCACAGCGATTATACGGCACACATGAATTCACATCGCAATGTACGTCCTTACACGTGCAATTATTGCGGTGCTCAATTTATAAGAAAGTACAATTGTCTGAGACACGTTAAGGAACACGAGGAAAACAAGGCTTACACGTGCGACGTTTGCAACAAAACTTTTCATCGTTCTTATTATCTCAAGGAACATTTGAGAGTGCATTCGGGCGCGAGACCCTATACTTGTCATATTTGCGGCAAATCTAGCAGCACCAAATCCAATCATAACAAACACGTTAGAATTCATCACGCTCGCGAACCTGTTAATacggaaaattga
- Protein Sequence
- MDLGASNNAGGGGGTVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSSSSASAPSARLTPTPPITTTATTVLSAGGSSNNGQPTTNSGGALSSQPPYPMGPIFECPPAINTMMPPPPQFASFSYQQFVNNGTMMIPQYAMAPPQANQMMQMLYNPYGMYQQQQIPTIQMLSPIAAIPTARMRQVVSVGADSPSRNVVTTNPTGDNKQMSNDSTDEAEAERILPDMEPESMAEANDDEASQARDDANDATGCRMEHREQQTQDGLLRRLNCERRDFMDSRHLDGENCKTANDDDEEAESILPDLEDRDSQLDSQPLSRATEFEEREAAAAAAAAEQFAQQAYDGDMEKMGSGDAEGDDARAIKMEGDGIADCADVTDDTSRAARRHNQMEKTKKTVGETEVKRLEHLSVGTMGSTFDGAHGKTDKDATKKNGRQEDAADDEEDDDAEEDEEEQQPLRQQSQDSSNVEDTSTPDESTGDKMERPEKMYTDEIVEEAIAGAIANDNVETIDEVQGVTTDAYRYRCSSSVPCSPTATKKIYRTCSVRSWYGSNDNFNLYSVGFETVGLQDPDMDDDMKHMEDNLDEEDMELDDIPNSHANFTKQHDNTNPMRSHSRTSVISAISGLRVHDDRVKACSPEFANDSGHADAVEVADEDRRDAAPPRHKREPEAEEGVEDEDEDDDEDDDEDYDDDDDDDDDDDEMMNFADCSMKQHNQDCGLNVDEQLKSESLKTSPIDNFERKFDSNEIYHQSVITEHVSSFPTINSQQSMIIHENYLNANEKSSNDNMMNISEFVDPTTSAESASFRDSNKIVNQHLPSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSRQSMASSEGGIGIDEEVKSVNMRADETMPPRGELSEQESNGCNEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNETGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKEAGPSSSANNHPTHEQSDETKDIKLLDGRMNAFDDIFVSGIHVQQNYHHHQQPLLHQLQPPQQPADPTKSETEQKIDGGLSSMTQNLEISCAMCSQRFTSERSLQMHNRRVHGTEVARRLQEISKCQICNEEFSTVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTICDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAHRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -