Dlae006752.2
Basic Information
- Insect
- Diplazon laetatorius
- Gene Symbol
- -
- Assembly
- GCA_963662125.1
- Location
- OY759156.1:17954185-17965704[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.03 2.4 8.8 2.5 1 23 359 381 359 381 0.95 2 19 0.029 2.2 8.9 0.6 2 23 426 447 425 447 0.95 3 19 0.0014 0.11 13.0 2.6 1 23 530 552 530 552 0.97 4 19 0.00066 0.051 14.1 1.4 1 23 556 578 556 578 0.96 5 19 3.8e-05 0.0029 18.0 0.7 2 23 686 707 685 707 0.97 6 19 1.2e-05 0.00093 19.5 2.1 1 23 712 735 712 735 0.94 7 19 0.0027 0.21 12.1 0.3 1 21 742 762 742 766 0.91 8 19 0.00014 0.011 16.2 3.6 1 23 849 871 849 871 0.97 9 19 6e-05 0.0046 17.3 5.0 1 23 940 962 940 962 0.97 10 19 0.00059 0.046 14.2 1.1 1 20 967 986 967 988 0.94 11 19 0.0018 0.14 12.7 0.5 2 23 999 1020 999 1020 0.96 12 19 1.4e-05 0.0011 19.3 0.7 2 23 1057 1078 1056 1078 0.97 13 19 2.9e-05 0.0022 18.3 1.6 1 23 1083 1105 1083 1105 0.95 14 19 0.00022 0.017 15.5 1.8 1 23 1111 1133 1111 1133 0.98 15 19 5e-06 0.00039 20.7 0.4 1 23 1149 1171 1149 1171 0.95 16 19 1.6e-06 0.00012 22.3 0.3 1 23 1177 1199 1177 1199 0.99 17 19 3e-05 0.0024 18.2 0.3 1 23 1205 1227 1205 1227 0.98 18 19 0.00016 0.013 15.9 4.1 1 23 1233 1255 1233 1255 0.96 19 19 0.007 0.54 10.8 0.7 1 20 1261 1280 1261 1282 0.89
Sequence Information
- Coding Sequence
- atgGACGCCGTTGAAATTGATACGACGGAGGAAGTGCAAAACGACGATGGCATTGATACGACAGTGCCGGAGGTCTGTCGCGTGTGTTTGCACGGAAATTTGTTGATGAGAGATCTTTTCGTCGAGAACGAGGTTGTCTCGTTGTCGACGAAAGCCATGAGTTTCGCTAGTGTGAAGATGCTACCCGAAGACGGCCTGCCCGGTCAGGTGTGCTGCGACTGCGCCGACAAATTGGATTCGGCTTACGAATTCAAGCTGCAAGTCGAACAAGCTGACAACGTACTCAGACAGAGATACGATTCGTTGAACATCAAGgaggaactttttttcaacgaagtCGAAGTGCACTTGGAGGGCGAACGAGCGGACGTCGAAGACGAAGATTCGCAAGTCATGGAGACGGACGAGAGTTATCAGACCAACGTCGATAGTCTGAGCGGCGAGGTGGTCGACGATGAGAAATCCACATTGCTGAAGGATCATTTGGCTCTGCTGCAAGTGCAAAAACTTGCGGAGGAAGAATGCGCGGCGAGCTTGAACGAAAAGCATTCCAACGAGATTGCCGAAGAATCAACTGTAGCCGAGATGCTCGAATCCACATCGGATCACAGTCAGTATTTGGACgtgaacgacgacaacggcGACGAAATAGCGACGTGCGAAATTTACGGACAATCCGTGAAGGAAGAAACGATGCACGTGATCGAAGGAATGGCCATTGACGAGCACAATTACATAATGCAACAGGGTTACGGTCTGGCGAGAACCGAGGAAGAATTGGAATCCCAAGAAACCGTCGATTCGACAGCAAACGAAACATCCGAATATCTGTCAATGAtgaacgacgaaataaattcgaaaaacacaTCCGAACAATCCGAAAATTccataaaaatcgaacaatcgataaatcacgaaaacgtTAAAAGCGACGCAACAACACCGAACGAAACGCGTCGTAGCAAACGTCAATCGTCAAAACGCATGCGCAACACCGATCAagacaattatttcgaaaatttaaatctCAGCagcagattgaaaaaaaatcatgaaaaattggaaaaaatattttttttgtgttatctCTGTGACAAACAATTCGTATCGAAGAACATATTGAAGGAACACATGCATTCGCACGAGGAAGTTCGTCGTAcgttgtcgttgaaaaaaacggaaaaatttgataaacgtTCGAGTCCGACGAAAATATCATCGACGAGAACGACGTCGGCCACTTCAACGCCAACGTCGTCCGGTAAAAAATCCAACAAATGTCCGTACTGCGGAAAAGAATATTTGTACGTGATATCGTTCAACAAACATTTGaaacaacatgaaaaaaataaagattcgTCGAGGGACGAAGGTTCGATGACTTTTGAAGAATCTTTGCGagccaacgacgacgaagacgacgaagacgaggaCGATGAGTCGAATTTCGTGACCCacgaagacgacaacgacgatccAACGTCCGAAAACCCGAACGAACGAGTCAAACGGGAAAACGACGATCGTGAAAACGACGAacaaatcacgaaaaaacgtaATTCCAATCGTTCGACAATCACACAAAATTTTACGTgcgaaatttgcgaaaaaaatttcgacgcaAAATCAGCTCTTAACGATCATCATTGCGAacacgtgaaaattttcaaatgcaacACTTGCGATCGTGAATTCGacgaattggaaaaattacgTCGTCATCGTTCGGACCACGTGGTAGACGGTGTATTATCGTCTCAGGATCTCGACGATCACATTTATCAACGTGAATTCGACGTCGTTGGTCCCCACGACGATGAGACATCGATCAATTACGAAACAATCGACGACGAACAATCGCAAATTAATTTGCAAACTATAAACGacgaacaaaatatttcacaacgtgaaaatgataatgacGATTCGGCGaatgacaacgacaacgaatgGACGTTGGAAATTCAAccgaacgacgatgaaaattacgaGGCGACGGATTGCAaggaaaaaattgaggaaatAGACGAGAATTGGTCGGAGAGCAAAGATTTGAAATGTCCGAATTGTCCGGCTGTTTACActcacgaaaaatcattgtcCAGACACATGGAAACTCACATCGATGCGAATTacgtttgtaaaatttgtaaaaaaaaattttcgcgaaaaGAACGTTTGCAACGTCACGTGGAACAGCAGCACGAACGTGAAATCTGTGCTTACAAGTGTGacgattgtgaaaaaacaTTTGGCAACGAATTGACTATGAGAAATCATTTGATCGCGACTAATCACAAAACTCGTGTTCACGGTGTGAATTACGATCCTAATAAACGTTTGAAACGCGTTGCCGCCAAAGCCGcgcaaaaaataatcgacaagATAAAAACCGAGGATATCATGGACGACGATGGAACGTCGGGTGAGACGATCGAtggtaaaaattcgaaaatcgacGCGCGTTGGTCGGCGGAAAATTCGAAGACTCATCAGACGTCCGCGTCCCGAAAATCGCATCAACGCAACGGACGACGATGCGATTTCGAGTGCGAGACTTGCGGACGTAAATGCAGTTCGAAACAATCGTTGACGAAACACGTGCAACAGCAcggaattaaaaatgaaaatttcgatgattttgcgaaaattgatggaggaaaaaaatcggttagTTTCGATCTTGGCGATGGTTCGACTTTGGCGAcgcagcaaaaaaaatcgtcgagtcGCGACGAAGCGACGATCAAGCGGGAAAACCCGGAGGACGATGATAATTCGGATTTCGAGAGCGGTCTCGATTGGCCAATGGACAGTCACAAATGTCCgacttgcaaaaaaaaatacagcacgaaaaaatcattgttgcGTCATCAGTTGTTGCACGAGGAGCCCCATTTCGAGTGCGACATATGCAAtgtgaaattttatcgaaaggaCAAATTGAAATCGCATTATGACAaatgttcggaaaaaaatccggaTCAGGTGAGAAAGTGTAATATTTGCGGTGATAGTTTTGAGAACAATGAGATGCTGAAGGAACATCGTGGGAAACACGTGGATGAGGGAATTTTGACGGAGGACGATTTGAGGGACATAGAACCGGATGAGAGGAGAGAGGGCGGGAAGATTGTGAGGAAGAGGAGAACGGATATCGTGGGTTTGGAGTGCACGGAGTGCAACAAACGTTACACATCGCGGAAAGGACTTCTTCGGCATATACAggTGCACGAGGGTAAAAAATATCTGTGCGACATatgtccgaaaaaattttatcgtcgcGAACATTTGAAGATTCACGTTGCAAAACACAACATGATAAAACCTTACAAATGTTCGCGTTGCACAAAACGTTTCATCAAAGAGGAACAATTGGCCAATCATTTGTCGAAACACGAtcgtaatttcaaaaaaacaaaagaaacggACAGTTCGAAAAGATTTTTGTGCGAAATATGTTCGAAGAGTTTTACGCAATCGACGACGTTGATCGCCCATTTGCGAGCTCACAACGGAATAAAACCGTACGTTTGCGAGGTTTGCGCACGTCCGTTCACGACTAACGCATATCTGAAGATGCACATGAGAACGCACACGCAGGAACGTCCGTACAGTTGTCAATATTGTTCGCGGGCTTTCGCACGTGCGGACACGCTGGCCAATCATTTGACGTCGCACACGGGCGAGGCCAAGTATCATTGCAAATATTgtccgaaaaattttcgacgattgaaaTCGCTCAAGGAACACGTTTTCATACACACCGGACAACGTCCGTACTCGTGTCCAACGTGCGATCGTCGTTTCAACAACAACGGCAGTCGTTATGCTCACAGCAAACGTtgcaaacaaaatattttgcaaaatcaaAATCGTGAGCAATCGTCGTCGCAGAATTTGGTTCAAGGATCGCCACAACACATTCGCATACATCAGTTGGCCGGTGATCAAACGGGACAGATGCAACTTGTGAAATCGCAGAATATTAAAACGATAACTATCGCCAGACCGAGCGAACAAATTTCCGGACATCAGGTTTTGCAGCATCAAGAATTATTGATGCCACTTATTTTACCGTTGACCGTGACTCTCACAGACGTCGATGAGGAAGTCATTCTACCCGAGGGCACCAAGATATTCACAACTGCTTGA
- Protein Sequence
- MDAVEIDTTEEVQNDDGIDTTVPEVCRVCLHGNLLMRDLFVENEVVSLSTKAMSFASVKMLPEDGLPGQVCCDCADKLDSAYEFKLQVEQADNVLRQRYDSLNIKEELFFNEVEVHLEGERADVEDEDSQVMETDESYQTNVDSLSGEVVDDEKSTLLKDHLALLQVQKLAEEECAASLNEKHSNEIAEESTVAEMLESTSDHSQYLDVNDDNGDEIATCEIYGQSVKEETMHVIEGMAIDEHNYIMQQGYGLARTEEELESQETVDSTANETSEYLSMMNDEINSKNTSEQSENSIKIEQSINHENVKSDATTPNETRRSKRQSSKRMRNTDQDNYFENLNLSSRLKKNHEKLEKIFFLCYLCDKQFVSKNILKEHMHSHEEVRRTLSLKKTEKFDKRSSPTKISSTRTTSATSTPTSSGKKSNKCPYCGKEYLYVISFNKHLKQHEKNKDSSRDEGSMTFEESLRANDDEDDEDEDDESNFVTHEDDNDDPTSENPNERVKRENDDRENDEQITKKRNSNRSTITQNFTCEICEKNFDAKSALNDHHCEHVKIFKCNTCDREFDELEKLRRHRSDHVVDGVLSSQDLDDHIYQREFDVVGPHDDETSINYETIDDEQSQINLQTINDEQNISQRENDNDDSANDNDNEWTLEIQPNDDENYEATDCKEKIEEIDENWSESKDLKCPNCPAVYTHEKSLSRHMETHIDANYVCKICKKKFSRKERLQRHVEQQHEREICAYKCDDCEKTFGNELTMRNHLIATNHKTRVHGVNYDPNKRLKRVAAKAAQKIIDKIKTEDIMDDDGTSGETIDGKNSKIDARWSAENSKTHQTSASRKSHQRNGRRCDFECETCGRKCSSKQSLTKHVQQHGIKNENFDDFAKIDGGKKSVSFDLGDGSTLATQQKKSSSRDEATIKRENPEDDDNSDFESGLDWPMDSHKCPTCKKKYSTKKSLLRHQLLHEEPHFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEMLKEHRGKHVDEGILTEDDLRDIEPDERREGGKIVRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCTKRFIKEEQLANHLSKHDRNFKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYSCPTCDRRFNNNGSRYAHSKRCKQNILQNQNREQSSSQNLVQGSPQHIRIHQLAGDQTGQMQLVKSQNIKTITIARPSEQISGHQVLQHQELLMPLILPLTVTLTDVDEEVILPEGTKIFTTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -