Basic Information

Gene Symbol
ZNF236
Assembly
GCA_963662125.1
Location
OY759161.1:12607672-12618086[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.00059 0.045 14.2 2.4 2 23 53 74 53 74 0.97
2 23 1.3e-07 9.7e-06 25.8 1.5 1 23 93 115 93 115 0.99
3 23 3e-05 0.0023 18.3 0.6 1 20 121 140 121 143 0.96
4 23 0.00025 0.02 15.4 0.2 3 23 151 172 149 172 0.96
5 23 0.002 0.16 12.5 5.4 1 23 181 204 181 204 0.98
6 23 1.8e-06 0.00014 22.1 1.9 1 23 319 341 319 341 0.98
7 23 0.00055 0.042 14.3 1.7 1 23 347 369 347 369 0.99
8 23 0.011 0.82 10.2 4.8 1 23 375 397 375 397 0.99
9 23 0.00077 0.06 13.8 1.3 1 23 401 423 401 423 0.97
10 23 0.00031 0.024 15.1 3.6 1 23 478 500 478 500 0.98
11 23 3.2e-06 0.00025 21.3 2.8 1 23 506 528 506 528 0.99
12 23 1.6e-05 0.0013 19.1 1.3 1 23 534 556 534 556 0.98
13 23 9.5e-05 0.0073 16.7 7.2 1 23 562 584 562 584 0.98
14 23 0.2 16 6.2 2.8 2 23 944 965 943 965 0.95
15 23 1.5e-05 0.0012 19.2 2.1 1 23 971 993 971 993 0.99
16 23 0.00072 0.056 13.9 0.1 2 23 1000 1021 999 1021 0.96
17 23 9.2e-08 7.1e-06 26.2 1.4 2 23 1094 1115 1093 1115 0.98
18 23 0.088 6.8 7.4 5.6 1 23 1121 1143 1121 1143 0.93
19 23 0.00011 0.0087 16.5 4.1 1 23 1149 1171 1149 1171 0.97
20 23 0.0022 0.17 12.4 3.5 1 23 1177 1199 1177 1199 0.98
21 23 0.00037 0.028 14.8 1.8 2 23 1420 1441 1419 1441 0.97
22 23 3.8e-06 0.00029 21.1 4.4 1 23 1447 1469 1447 1469 0.98
23 23 5.6e-07 4.3e-05 23.7 3.0 1 23 1475 1498 1475 1498 0.96

Sequence Information

Coding Sequence
ATGACACTCGCCGTCGATTGCGTGAATTTCGCTATTCTACTCATTTGCTCGCGGGTGTTTCACTTTGCTCTGGGTCTGAGCGCGCAATATTACAAGGCCCAACTGGACGCCCATTTGAAGCTCCACAACGAAAAATGGTCGACCGAGGACGTGCGAAAGTGCAGACTCTGTCACAAACAGTTCACCCAACCGGCTCTATATCGTTTGCACATAAGAGAACATTACAGAacgaaaatcgtgaaacagACGAAGCGTGGTACTTGCAAAAAAACCACGTACAAGTGCAAGATATGTTCGAAATCGTTTCAAAAACCGAGTCAATTGATGCGTCACATAAGGGTGCACACTGGTGAAAAACCGTTCAAGTGTACGGTATGCACCCGCGCCTTCACCCAAAAGGGATCGTTGCAGATACACATGTGGCAGCACGTGGGTGTCCGTCCGTACGGTTGTGAATTTTGCAACGCTAAATTCAGTCAGAAAGGCAATTTGAACGCTCACGTATTGAGAGTGCACAACGCACCGGATGGCGAACCTATTTACAGCTGTACCCATTGTACTTGCGTGTTCAAGAAATTGGGCAGTCTAAACGGTCACATGAAGAAAATGCATTCCCAACCCACCGagGAAGCACCACAAAAATGTGATAGCTCGACGGAAGCCGATATACAAGCGACCGTCGACACAGTAATGTCCCAACTGGCGTCGCTCGACGCGAGCGTTAAAAATCCGGCAGATTCCACGGATCCGGAACTGACAACGACTTCCGAGGGCGATATACTGCAACAGGCTCTGAAGAACAGCGGTTTGGAAAGCAAAGATAAACATTCCGTGATATTGAACAAAAAAGCCGATGCCCAAACGTCTTTTGTTACACTATTGGACAGAGCGCCGGACGGTTCGATGAGgaGATACTTGACGATAAAACAACGATGCATAGGAAGCACGAGATGGTACGCTTGTTCGTTTTGTCACAAGGAATTCAAAAAACCGTCGGATCTCATAAGACACTTGCGAGTTCACACCCAAGAAAAACCCTTCAAGTGTTCATTCTGTTATCGTTCGTTCGCCCTGAAATCAACGATGATAGCCCACGAGAGAACGCACACGGGTACGAAGAAATATCAGTGCAACACTTGTGACAAAACTTTCGGTTGTCACGGTAGTTTATCGACGCACGCGCGTACACACGCGAAACCACACAAATGCTCGTCGTGTGACAAAACTTTCGGTACCATTGCCATGCTGAAGAGTCACGCGAAGATTCACGCGAAAACGAAATCAAAATTGTCACCGGAGGCCGAGATTCTGGTGCCGCAAATCGTTCTCGAAGAACCGTTGATCATAAGCGACGCGGGTAATAAAATTAGCGTCGCTCACGTTCAATCGAAGCAGAAACAGATTTACGACAACGCGGATTTGGCGAGACCCCACAAATGTTGGGTATGTCCCGCGGCTTTTCGCAAAATCAGCCATTTGAAGCAACATTATCGCAGACACACCGGTGAAAGACCTTACAAGTGTTCCAAATGCGACAGgagatTCACGTCTAACAGCGTTTTAAAATCGCATCTGCAGACCCACGAAGAATCGAGACCCTACAGTTGTTCGGTTTGCAACGCCAAATTTTCGACCCAGAGCAGCATGAAACGACATTTGGTGACTCACAGCAACAAACGTCCTTTTATGTGTCCCTATTGTCACAAAACTTTCAAGACGTCGGTAAATTGTCGTAAACACATGAAGATTCACAAAACCGAACTGGCCCAACAGCAATTGGAGCAACAGAGGACACAGCAAGACGTTCAACTGGCATCGCCGATGAAGGACGGACGAGCCATGCCGTTATTGACGGAAAACGTGACGATTTCGGATGACACGAGATTAGTGACGTTTCAGTCGGAACAAACTGCTCCGGATTTCGATCAAGCGTTCAACGATCAGTTGCAAAAAATATCCGTAGACAaggaaaaaacatttctacCCAATGACGAGATAACTCGGACGATTGACAATCAGACATTACCCGTGATTGATAGCGATAACTTAGGAACATCCCAGACCCTGCATGCCGACGAAACGGGCACCATTACCCTACCCAACTATTCCGGAGATCAAACACTCACGCCAGAAAGCATAAGAGAGATTGAAGAAACGTTGAATCAGCAATTGTTCAATATCGGAATGCACGATGCGAATTCGGAATCTCTCGAGTCGCGAGATCAGCCGGTATTGAACATCATTTACGAAAATTCCAAAGAATTGGATTCGACGAACAACGGTTCCATAAATTCGAGCATATTTCCGTCGCACTTCGATGCCTTCGACATGAGTCACATTACCTTGCAGaCGGACACGGAAATCGATATGGGAATAAGTTCGGCAAATTCGACGAGCATGGCGAGCATATTGCCGAGATCGGCGCAGGAGGAGCAACGACTCGTGCCCGTGACGACGTGCAGCAACGTCGACGATTCGCCGAACAAATCTTCGAGACACTTGATGGTCGTGAGTTCGATGCAAACCTGTCCCGAGCTCTCGAGACCGGTTCAGGCGTGTCCTAGGTTCTCCAAGGTCATTGCCAAGGCCGACACGACGGACCTCACGGATATTCCGCACGCGGATGAGGATGCGAACGGTCgaaactcgtcgtcgtccgcgATATTGACGACAGACACAGTCGTCTTCGCATGCAGCAATTCGTCCGACAAACGAGTGAGGAGTCAAAAAATTCTTGATACTCGTGAAAAATCTGGAACTTTGGATCAAACGTCGTCGATGATGAACAACGAGACACCGACTTACGTGTTCGAGACCGAATCTTTGCTGCAGTGTCACATGTGCAGTCAAAAAGGATTTACCATGGAAACTTTGAAgAATCATCTGAGCACACATCGAGGAACCAAAGAATTTCAATGCACCGAATGCCCGATGAGATTTTGCACCAACGGCGGTCTTAGCAGACACTTGAAAATGCACGCCAGTAAACAACAATGGAACTGTCCGATGTGTCTGGAATCGTTTCCGAACGAGGCCCAACTGAAACTGCACACGAAGATGCACGACGACCTCGGTTGGAACGTTTGTCCGATCGAACCCGACAGTTCGCAAAAAGATTCGCGCACCATCGAAGCCTCCACGAACTTCCcaaccgtcgaaaaaaaatttctcacccCCTTAAATCCCCAAACAATCTCGTCCCACGATCGACCGACCGTccccgaaaaaattcatcaaaattccTCGGCcacgacgatcgaaaaaaaagaacacacgAACAAATGCAAATACTGTCCGAAAACATTTCGCAAACCGAGCGACCTGATAAGACACGTGAGAACCCACACGGGCGAGCGACCCTTTCGTTGTGAATATTGCGACAAAAGTTTTGCGGTCAAATGCACCCTCGATTGTCACACGAAAGTCCatacgggaaaaaaaactttttgctGTCACGTTTGCAACAGCATGTTCGCTACGAAAGGCAGTTTGAAGGTTCACATGCGTTTGCACACGGGTTCAAAACCCTTCAGATGTTCCACGTGCGATCTGCGTTTTCGCACATCGGGACATCGAAAGGTTCACGAATTGACGCACACGCGGGAATCCaatcgcaacgacgaaaaacgaaaattaaaacacGTTAAAATCGCGGCGATAGCGGAAGTCGTGGCGCAAGTGGAAAAAACCAtcgacaacgacaacaataATGTTGACACGAACGTTGTGGACGATGAGCAACGTAATATCGGTGAATTCACGTCGTTGGACAATATTACCATCGACGGGAACGAAATTACCGATCATCAGATTACTTTTAACGCCGATGGAacgattttcaacgataattcgatattgTCGATAAACGAGAGCAATCAGTTGGTCgctaatttacattttttgctCGCCAATGGATTGGTCACCATTCAGGCCGACGAGACTTTGCTCGATCAGGGACAGAACGTTGATGTCGATGGGATGAGTGAGAATGTGGAAATCGGTGAAATTTCTACGATCACAAATGTTAATTTGGATCAACGACAGCagcaaaatttgaatttcgatgataATCAAACCGAGGGTCTTATAATTACGACCCAAATGACGACCGAGGATCATCAACAGCATCGACAATTGAACGATTGCATGACCATCGTTCAAATCGATTCACAAAATGAAACTTCAACCGTCGATATAAAATCTacggaaaataattcttcgaaaGAAACTATCGTAAAATCTTCGCAATCGAAGAAAGAGTGCGACGTTTGTGGAAAGACATTTATGAAACCTTGCCAAGTGGAGAGACACAAACGCGTACACACGGGCGAACGTCCGTACAAGTGTCAATTGTGCGACAAATCGTTCGCACAAAAATCTACTTTGCAGATGCATCAGAAACATCACACGGGCGATCGTCCGCATCCGTGTCCACATTGCGACTATTCGTTCACGCAAAAAGGCAATTTGCAGACGCATTTGAAACGCGCCCATCAATCGGACGCGAACGTAacgacgaagattcgacgggGACAGCAGCAACAAGGTTTCACAGCCAAGATCGATTCGGAATCCAACGACGATGGCAGATTGTTGAATTTCGATGATATTtcttttgtggaatttttaaagtga
Protein Sequence
MTLAVDCVNFAILLICSRVFHFALGLSAQYYKAQLDAHLKLHNEKWSTEDVRKCRLCHKQFTQPALYRLHIREHYRTKIVKQTKRGTCKKTTYKCKICSKSFQKPSQLMRHIRVHTGEKPFKCTVCTRAFTQKGSLQIHMWQHVGVRPYGCEFCNAKFSQKGNLNAHVLRVHNAPDGEPIYSCTHCTCVFKKLGSLNGHMKKMHSQPTEEAPQKCDSSTEADIQATVDTVMSQLASLDASVKNPADSTDPELTTTSEGDILQQALKNSGLESKDKHSVILNKKADAQTSFVTLLDRAPDGSMRRYLTIKQRCIGSTRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSFCYRSFALKSTMIAHERTHTGTKKYQCNTCDKTFGCHGSLSTHARTHAKPHKCSSCDKTFGTIAMLKSHAKIHAKTKSKLSPEAEILVPQIVLEEPLIISDAGNKISVAHVQSKQKQIYDNADLARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLQTHEESRPYSCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKTELAQQQLEQQRTQQDVQLASPMKDGRAMPLLTENVTISDDTRLVTFQSEQTAPDFDQAFNDQLQKISVDKEKTFLPNDEITRTIDNQTLPVIDSDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMHDANSESLESRDQPVLNIIYENSKELDSTNNGSINSSIFPSHFDAFDMSHITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTTCSNVDDSPNKSSRHLMVVSSMQTCPELSRPVQACPRFSKVIAKADTTDLTDIPHADEDANGRNSSSSAILTTDTVVFACSNSSDKRVRSQKILDTREKSGTLDQTSSMMNNETPTYVFETESLLQCHMCSQKGFTMETLKNHLSTHRGTKEFQCTECPMRFCTNGGLSRHLKMHASKQQWNCPMCLESFPNEAQLKLHTKMHDDLGWNVCPIEPDSSQKDSRTIEASTNFPTVEKKFLTPLNPQTISSHDRPTVPEKIHQNSSATTIEKKEHTNKCKYCPKTFRKPSDLIRHVRTHTGERPFRCEYCDKSFAVKCTLDCHTKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFRCSTCDLRFRTSGHRKVHELTHTRESNRNDEKRKLKHVKIAAIAEVVAQVEKTIDNDNNNVDTNVVDDEQRNIGEFTSLDNITIDGNEITDHQITFNADGTIFNDNSILSINESNQLVANLHFLLANGLVTIQADETLLDQGQNVDVDGMSENVEIGEISTITNVNLDQRQQQNLNFDDNQTEGLIITTQMTTEDHQQHRQLNDCMTIVQIDSQNETSTVDIKSTENNSSKETIVKSSQSKKECDVCGKTFMKPCQVERHKRVHTGERPYKCQLCDKSFAQKSTLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQSDANVTTKIRRGQQQQGFTAKIDSESNDDGRLLNFDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-