Basic Information

Gene Symbol
Trerf1
Assembly
GCA_963662125.1
Location
OY759159.1:11177185-11194007[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-10 9.9e-08 32.0 0.0 2 46 836 880 835 880 0.96

Sequence Information

Coding Sequence
ATGAGATTGCACGGTGGTTACTTCAAAAAGgATGAGAACAAGAAAACGGAGAAGAAGGAAACACCGGGACCACCGCTGCAGACGGCTTCGGTGAACGTTCGAGCTTTGATAGAGGAAAAGATTATACAGAAACGAACGACCGAAGCTAACAACAGCAGTCAAGCCCGAGCGAACGCAGCTTTCGCCAATCAAGATGGCACGACCCACGTTATCGGAAAAACGAGTTTCGCGGTGCCTGCGCCCCCGCCCCTCGGTCCGGGCGAGAAGATACGACGACTCTCGGACTCGGAACACTTTCGACAGCCGAACGTCACCGTGGGGGGTCACGCGGCCGTTCAGAAACAGCTGCAGGAGGCCCAGACCCAAGCCCAGGCCCAAGCTCTCGCCGATCTCATTCTCAAGGGCACGACGAAAATGGCTGTGAAGAGAGCGACCTCCGAACCAGGTCAAAGGCTTCAGCTTACTTATCAGACTTCCGTTCCATCAACGACCGCCacccagcagcagcaacagcaacaacaacaacaacagcaacaacaacaacagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagaatcAAACCCAAGCGTCAACACAACCGGCGATGACGGAAAGTTTCACGATGACCGGATATTCGGAGGACGGTGGCTACTTCAGTCCGAGTTTACAGGACGAAGTTTTTCAACAGGTGACCGCGGTTCCGGACTCCGTTCTTCTTCACGCGACCCAATTGGATTCCATTCAgTTTCAGACGACGAGTCTTCTTCAGGAACAGTCCCCCGATCAATTGCAGGACATAACCCTGGAGGATCGTTTCACGTCTCAGCACACGGTAAATCCGGATCTCCAGGCGCTGGTGAACTCGCCCCTGCCCGATTCACTGGCGGAATTCAGTACATACGGCGCCCAGTACACGGAGAGTCCCCACACATTGCCAGCCCAATCGCCATTGCCTTCGCCCCTGACGCGACACGACAGTCCGAGTTTCACCTATCCAACCCCACCGGCCAGTCAGGAGGGTCTGTTGACGGGCAGCCTGCCGCTCCTCAGTCCCCAAGAGGATCCGGACAGCGTCCGATCCGTGTCGTCACCCTTATCCGCAGCTTTCTACACAACGACAATGTCCTCAGCCGCAGCCGTCGAAGAAGCTCTGAGCGAGGTGCTTCCCGGTGAATCGGAAACCGATGCCGATCTTTACGGTCCAGGTTCGCCAAATCCAAACTCTCCATTGCCGAGTCCATTGTCGGCAACTCCAGCCCCATCGCCACTTTCCTCTTTGCCTCCCTCATCGGTGTCCTCACCCGGCCCGGCAACCTTTTCCACCGGTTTCCCAGTCTCCCCCCATCACGGTTTGCAAAATCAAATGATGCCAAATTCCGAAGATCCACTACTGTCATCCAGCCCCAAAGATTTCACCGTTGGCAGACgcaaattcgaatttcaatcCTACAAACTGATAACCAGCCAGAATCTTGTGGATTTCGGTCTGGGCAATGGCAGCCTTGCCGGCATCGTCGTTGACAACAATGGCGAATACAAACTCATACAAACCGCTGGTCTGCAAAAAGCCAATGTTCTCGTGCAAGCTGGAACTCTCAGTCCTGCGATGACTTTCCGAAAGGAAATACGTCTGGCCACACCGAAGATCGAACCTGGCATCGTCAATATCACGAATCCCGGACTCAACGTtcacaatcatcatcatcatcagttTTCACAAAATTCCATGCATCAACAAGCTATCAATCCGGCAAAATTTCTCATACAAACCAATCACGGAACGAAGAATTCGTTGAAGCACAAAATAACGATGAACAACAGTTTGCCGGTTCCTGTGGAACACATCAAGGAGGAACTTTTGGACGACGATGTGTTTTTGAGTCCCGGAAGTATTTCGAACAGCAGCCCGGTCAGACAATCGCGGAAACGGCCGAGAATGGACGGTCATTGTGCGAATTCCGCACATTCTTGTCCGTCGAGGTTGAGACGGGTTTGCGATCGTCATTGGGACAGCAGTTACACACCTCCGCCCATGCTCGATCCTTCCCGACCGGGTTCCGGTCTTTACGCCAGATTGCATCAACACGAACGCGAATCCGAATTCAGTAGCGACGATTCGCAGGGCAACGACGGCCCACCGCCGAGAATAAACATCGGCACGAGGTATCAGGCGACGATACCGCCTTTGGGCTGCGACGGCGATCGGGGAAGGGGAGGACGCGAAACCGATCATCCGCTTTGGGATCCCGGTATAACCGGTCATCTGACCGACAACGAACTGGAAATGTATCTGCAGTTTGCTTGTTGCGCTGCAACCCCCGGGGGTGGAAGAAACAAGGAATACGCTATTCACCTGTTACACATGTGCAAAGGAAACATTCGGGAGGCAATGCTGAAATTAATGAGACCCACACCGACACTGCCGTCCCAACATCCGTTGCTGAGTTACGAGTGTCAGGAGTCCGATCGTTGGACGTCACGGGAAAtggatttattttatcaagGACTTATCGAGTACAACAaagattttccatcgataGCCCGTGACGTTGGCAACAAAACCGCGAAACAGTGCGTgcaattttattatctttgGAAGAGATTGTGTCCGGACGAATACAAGAGGATTCGCGCGAGACACGGAAAAACGAAGATAAAGAGCGAGAACAAAGATGCGAATCGTGATACAAAGGACACCAAGGAATTGCGCGATGCCATTGCCTCGGTCACGGAAATGGATTtcagcgaagaaaaatcgatactTCATCGCACACTCTTGCagacgaacgagagagaaaattCTGCGACCCTCACAACGAGCGAAGGCGAATTGAGACTCTTTGCCTACGACTGTCCAGATAGCTTTAGCGGAAGCGTAACAGTTACGATGACCGGATGCACCCAAAACGTCAAAGCCGGCATTAACAACCGCGTCAACTCTACAGTCAACACCAACTCACAAACTCACATTAGTTCCGAGCAACAACTAACCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCCCACATGAAATCACACAGGCCAATACCTACGCCCGATACAACGGGTCAAGAATCTAAGAGACCATTGCCACAGCCGATAAATCATCAACTTAAGCAACCCCAGCATCATCAACAGACAAATTTGTCGACCCAGTCGCaggattatcaaaaaaaattgcaatcgtcGACCGGCAACGATGCGAACAATCCGAATGCCAATCATTTGTGGCACAATCCGACGAGATTGAGGCCCCCGTAG
Protein Sequence
MRLHGGYFKKDENKKTEKKETPGPPLQTASVNVRALIEEKIIQKRTTEANNSSQARANAAFANQDGTTHVIGKTSFAVPAPPPLGPGEKIRRLSDSEHFRQPNVTVGGHAAVQKQLQEAQTQAQAQALADLILKGTTKMAVKRATSEPGQRLQLTYQTSVPSTTATQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNQTQASTQPAMTESFTMTGYSEDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSIQFQTTSLLQEQSPDQLQDITLEDRFTSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPAQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPDSVRSVSSPLSAAFYTTTMSSAAAVEEALSEVLPGESETDADLYGPGSPNPNSPLPSPLSATPAPSPLSSLPPSSVSSPGPATFSTGFPVSPHHGLQNQMMPNSEDPLLSSSPKDFTVGRRKFEFQSYKLITSQNLVDFGLGNGSLAGIVVDNNGEYKLIQTAGLQKANVLVQAGTLSPAMTFRKEIRLATPKIEPGIVNITNPGLNVHNHHHHQFSQNSMHQQAINPAKFLIQTNHGTKNSLKHKITMNNSLPVPVEHIKEELLDDDVFLSPGSISNSSPVRQSRKRPRMDGHCANSAHSCPSRLRRVCDRHWDSSYTPPPMLDPSRPGSGLYARLHQHERESEFSSDDSQGNDGPPPRINIGTRYQATIPPLGCDGDRGRGGRETDHPLWDPGITGHLTDNELEMYLQFACCAATPGGGRNKEYAIHLLHMCKGNIREAMLKLMRPTPTLPSQHPLLSYECQESDRWTSREMDLFYQGLIEYNKDFPSIARDVGNKTAKQCVQFYYLWKRLCPDEYKRIRARHGKTKIKSENKDANRDTKDTKELRDAIASVTEMDFSEEKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMTGCTQNVKAGINNRVNSTVNTNSQTHISSEQQLTVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPTPDTTGQESKRPLPQPINHQLKQPQHHQQTNLSTQSQDYQKKLQSSTGNDANNPNANHLWHNPTRLRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00841014;
90% Identity
-
80% Identity
-