Dlae007008.1
Basic Information
- Insect
- Diplazon laetatorius
- Gene Symbol
- lola
- Assembly
- GCA_963662125.1
- Location
- OY759156.1:21196944-21206607[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-16 2.3e-13 49.6 0.0 2 42 426 467 425 470 0.94
Sequence Information
- Coding Sequence
- ATGTCTATGCAACAGTTCTGTCTGAGATGGAACAATCATCAACCGAATTTCATATCCGTGTTCTCGTCACTTCTGAACAACGAGACTCTGGTTGACGTGACCCTCGCGGCCGAGGGACGTCATCTTCAGGCCCACAAAGTCGTGCTGTCCGCTTGCAGCACGTACTTTCAATCGCTCTTCACCGTTAATCCGTGCCAACATCCCATCGTCATTCTCAAAGATGTCAAATTCTCCGATCTCAAAATCATGGTGGATTTCATGTATTACGGCGAAGTAAATGTCTCGCAGGATCAGTTGCCGTCGATAATAaagACGGCGGAAAGCTTGAAGATCAAGGGCTTGGCGGAGATGCACACGGCTTCGTTGACAAAGTGGCCGAGCGGTGGCAACGAGCcgggcggcggcggcggcgggggAGGCGACAGAGGCGAGTCCTGCTCGCCGTCACCTTCGCCCTTGTCGCCGTCCTTTCGCCGCAAACGTTTGCGAAAAACGTCGACCGGCTCGACGTCCGGAACATCGGCCGAGAAACCCGAAGAGATGAGCGAAATCACACTCGTCGCGACGAACATCGTCAAACCCGAACCGCACATCGTGTCCCAAGAACCCGGTGGAAATATCAGACGACCCGTTAACACGACCACGGAATCTCAAGGCAGCATCGACGAGGATCAGATATCGattATGAGCAACATGGAAACGAGCACGGCCACGACTACCGCTCAGGGCGAGGGATCCATGCAAGAAGTGAGTCAACAACAGGGCGGTAACATAGGCCAGAGTTCTCTGGCTTCGCAGCCACCGGCTCATCATCAAGGATTGCAATGGACAATAATGGAGCATACTTATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGTCCCAATCGTCGTCTACGTCGGCATTCACGACCCCAGAAATCACCGCGACTTCGAGCATCAGCGAGCATCAGTACCAAACGGCGGGTGGTTCGAGCACAACGACGACCTCGTCGAGTTGTGCCTTGTCGAGTTATCCGAATTCGTCGTCGCACGGACcgatgcagcagcagcagcaacagcaacaacagcaacaacagcagcaacaacagcaacaacagcattCGACAAACGCGAACAGCGGTGGAGGAGGAAGTTCAACCGGAAGTGGCAACAGTGGAAACGGTGGTCCATCGCCCGGATCCACTCAATGTCCGAGCAATTGTCAAAGTCCATGCGCAAGTCCTCAAGCAACGATAAAACGCAAAAGATCGACGAATCCTCAAgccgatgaaaattttattcgcgCATTGGAAGCCGTGCGTTACGGTGGAATTGGATTTTGCAAAGCCGCGAGAATGTTCGGAGTTAACAATCGTACGCTATGGTTGGAATACAAAAAACGTGGCTATCCGAACAATCGTCCGAGTTTAAAATCGCGAGTTAAACAGGAAGTAAACAATTCACCGCCACCGTCGGGTGGAGGGACGAGTGCTTCGCAACCGGTTAATTCGCAGAGTCCTACGCCAATGGGACCACCTACAACGCCCCACagcacacacaacacacatcCGACGCACACAATGCTAACCGCTCATACACCGCACACCATGCTTTCCGGTTATATCGACAGTCGTCACACGGATTATTCGCTACCCACCACGGCCATGCCCATTAATCTTCATGGGGTCAATTATAATTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGGNEPGGGGGGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSGTSAEKPEEMSEITLVATNIVKPEPHIVSQEPGGNIRRPVNTTTESQGSIDEDQISIMSNMETSTATTTAQGEGSMQEVSQQQGGNIGQSSLASQPPAHHQGLQWTIMEHTYPRFALSSCQTNLSSQSSSTSAFTTPEITATSSISEHQYQTAGGSSTTTTSSSCALSSYPNSSSHGPMQQQQQQQQQQQQQQQQQQQHSTNANSGGGGSSTGSGNSGNGGPSPGSTQCPSNCQSPCASPQATIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNNSPPPSGGGTSASQPVNSQSPTPMGPPTTPHSTHNTHPTHTMLTAHTPHTMLSGYIDSRHTDYSLPTTAMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_00459884;
- 80% Identity
- iTF_00459884;