Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963662125.1
Location
OY759165.1:3123598-3125860[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8e-13 6.2e-10 38.9 15.6 2 59 88 159 88 165 0.81
2 3 4.1 3.2e+03 -1.8 0.1 35 48 227 240 225 242 0.74
3 3 0.31 2.4e+02 1.8 0.2 27 49 329 351 320 357 0.81

Sequence Information

Coding Sequence
ATGAGTACTCTGAAGAGCGTTATCATAACATTGCCTAAGAGCCTGACCAAGGCTCCGGGCAACGTGAATCACGGCGAACTCAGAGCCAACAACGCCAGATTGAACTTCGCAACGTCCGTTGTCGCAACGATGAACGACATCAAGATGGAACGCAAACCGATGATGAAGCAGCTCGACGAAGCGATACCCATGGAAACCGAACTCGTCAAACCGGACATGTGGTTCAGAGGAAAGAAACGACGATTGGATCATCTTACTTGGGAAGAAAAATTACAGCGAAaaaaattgaaaaatcgagtaGCAGCACAAACGTCGAGGGACcgtaaaaaagcaaaattagACGAATTGGAAGACACGGTGAAGGCGTTGAGCGACAGTTATGACATGCTGAGCCAAGAGTGCGACATGTTGAGATCGCagaacgaaaatttgttgttgGAAACTGAGAGAttgagacgagagagagacgaagctaaatcgacgacgacagcgacgatgacgacgacgacgacgacgacgacgacgacggacgaGACTTTGTGCTCGGGTTGGTGGGGCAGCACAGCCGGCACAGTTTCCGAACTGCCTGAGCACAAACGCATCGATAATACTGAAGATCATGACTCTCTACCTCCTCTCGAGGAACTCTTCGGCGAGTTCGAGGGCGACGATTACATCGAACGACTCGAGGAACTCGCCGAAAGCCTTTTGCGAGAAGTTACCGCAGAAGTGGAAGGAAGTTCTTGTAAACCAAATGAACAGATCGCGGTTAAGCAAGATCCCACTGAAGAATTTGACGATACAGAAGGAATGGTGGGGAAGACAtcaaaaaatgtggaaaccGGTGCAATCGTTGAAAGTTTGAATTTCAACGATGGGAAATACGTCGTGGCCGGGCCAACGACAACGCAAACAACGAATTTACCGATTAATTGCACGAGAACGAAACCAATGACGAGCAGCATCGATAAATTGTcgaatacgaataaaaaatgtcaaacaaaCGTCGAAGACCCGAAATCGACGAATTTATCGTTGAAACGTGAGATCGAAGTGAAGGAAGAACCATCGAACGACATGGACACGGTTTACGGAACTTACGACGAGGCGACCAATTGCATAACGATAATATATCCGGGCGATAACGACGACGTTGGGATACAGGAATGCGTTCAAGAAATCACGAGCACGAGCACCAGCACAAACGtcgaaaattccattttcgacgaatccacgaattatcgacaatcaaaaattgtcgtaccgaaaaattccaacaattatttattgtcaCCGGCTTACACATTCGCAGACTCGTTGTCGTCACCATCGAGCATTAATTCCGACGATTCCGAtgtgcaaatgaaaaattcgtgcaaattcgaaacaaatttgTCGGATTGCGGTTACGAATCACACGATTCGCCGATACAGTCGCAAAATTATGACAAAAGTTTGTCGTACGGACGAACTAATGTTAATTCCAGTGCGAATAACGCGGCTCTCAATGATCTTTGGCACGAAAGCTTTTCCGAATTGTTTCCGAGTCTTgcgtga
Protein Sequence
MSTLKSVIITLPKSLTKAPGNVNHGELRANNARLNFATSVVATMNDIKMERKPMMKQLDEAIPMETELVKPDMWFRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVKALSDSYDMLSQECDMLRSQNENLLLETERLRRERDEAKSTTTATMTTTTTTTTTTDETLCSGWWGSTAGTVSELPEHKRIDNTEDHDSLPPLEELFGEFEGDDYIERLEELAESLLREVTAEVEGSSCKPNEQIAVKQDPTEEFDDTEGMVGKTSKNVETGAIVESLNFNDGKYVVAGPTTTQTTNLPINCTRTKPMTSSIDKLSNTNKKCQTNVEDPKSTNLSLKREIEVKEEPSNDMDTVYGTYDEATNCITIIYPGDNDDVGIQECVQEITSTSTSTNVENSIFDESTNYRQSKIVVPKNSNNYLLSPAYTFADSLSSPSSINSDDSDVQMKNSCKFETNLSDCGYESHDSPIQSQNYDKSLSYGRTNVNSSANNAALNDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-