Basic Information

Insect: Diorhabda carinata
Gene Symbol: stc
Assembly: GCA_029229535.1
Location: CM055254.1:38963751-38977020[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2.5e+04 -5.5 3.4 6 10 1111 1115 1108 1115 0.69

2 12 2.8e-05 0.36 11.4 14.9 3 19 1155 1171 1151 1171 0.93

3 12 5.6e-08 0.00071 20.0 12.7 1 18 1207 1224 1207 1225 0.97

4 12 2.4e-09 3.1e-05 24.4 11.4 1 19 1265 1283 1265 1283 0.97

5 12 3.6e-06 0.046 14.2 13.6 4 19 1330 1345 1323 1345 0.87

6 12 2 2.5e+04 -4.1 2.2 5 10 1374 1379 1374 1379 0.93

7 12 0.0039 50 4.5 10.7 1 11 1385 1395 1385 1406 0.94

8 12 7.9e-10 1e-05 25.9 15.9 1 18 1412 1429 1412 1430 0.97

9 12 2 2.5e+04 -4.2 0.9 5 10 1458 1463 1458 1463 0.83

10 12 0.0051 65 4.2 12.0 1 19 1469 1486 1469 1486 0.89

11 12 6.4e-09 8.1e-05 23.0 15.9 1 19 1522 1541 1522 1541 0.97

12 12 0.00011 1.4 9.5 15.5 1 18 1551 1569 1551 1570 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2.5e+04	-5.5	3.4	6	10	1111	1115	1108	1115	0.69
2	12	2.8e-05	0.36	11.4	14.9	3	19	1155	1171	1151	1171	0.93
3	12	5.6e-08	0.00071	20.0	12.7	1	18	1207	1224	1207	1225	0.97
4	12	2.4e-09	3.1e-05	24.4	11.4	1	19	1265	1283	1265	1283	0.97
5	12	3.6e-06	0.046	14.2	13.6	4	19	1330	1345	1323	1345	0.87
6	12	2	2.5e+04	-4.1	2.2	5	10	1374	1379	1374	1379	0.93
7	12	0.0039	50	4.5	10.7	1	11	1385	1395	1385	1406	0.94
8	12	7.9e-10	1e-05	25.9	15.9	1	18	1412	1429	1412	1430	0.97
9	12	2	2.5e+04	-4.2	0.9	5	10	1458	1463	1458	1463	0.83
10	12	0.0051	65	4.2	12.0	1	19	1469	1486	1469	1486	0.89
11	12	6.4e-09	8.1e-05	23.0	15.9	1	19	1522	1541	1522	1541	0.97
12	12	0.00011	1.4	9.5	15.5	1	18	1551	1569	1551	1570	0.93

Sequence Information

Coding Sequence: ATGGAACCCGAGGATGCTAAATTCATGAGAACaGAACGTAAACCAGGATCAGTTGATGTTCATCCAAATATAGATGCTATTTGCTTAAATTATGATTTGGATATTCAAATTTTAGCATCTAAAGAGAATGTCATTTATGGTGAGAAGAAGAGTCttaagaaaattatagaattacCTATGATAAACAGCAGAACTGACTGCCATGCATTGTCTAAAGAGGTTGTTAATCAGTGTGAACTGATTCATCATTCACGACTACCTGAAGTTGAACAAATTATTTACTATTTGAAAAAACGAAAGCTTCAAAATAGTGGTAAAGgTATTGGAAATTTGAGTGATGGAGATAAAATTGGTTTTGAAAAACTATCTGGTGGAATTCAAGAAGCAAACTATAATAGTTTATCAGAATATATTGATCTCTTATATGAAGGAATGGCAGAGAAAATTAAGGGAGCCCAACTTATTCAATTGTTAGCCAGGGATCCAGAAAACCTAGAAGCACTAGCAACCAATGAAACATTGATTAGTGCTTTAGGTAGGGTATTGAGAGAAGATTGGAAACGAAGTATTGCATTAAGTACCCACTTGGTATTTACTTTTTTCTGCTTTTCTATGTACTCTTGTTTCCATgaagttattttaaaatgcAAGGTAGGTTCAATATGTATGGATATAATTGATTATGAATTGAGACGTTATGATAGATGGAAAGCGGATTTTGAAGGGTCTGAAGCTCCTTCAGATATTCCTATTGTCCGCAAACCTTGTCCAAGTAGTGCTAGTATGTCTGAAATACCTCGCAGTCGAATTCCAGAACCAGTTCGTCCAAAATCAGGAAATTTTTCTGATAGTAACATTAGTCAAATTATGGAAGgTAGCATTTATGATGACTTAACAACTTCAATGGAAGGTATCGATGATAGAAAACTCACTGATGAACAGAAATTAAAAAGGTTCCGTACTTTAGTAAAAAAACAAGAACATTTACTTAGAGTAGCTTTCTATTTACTTCTGAACATTTCTGAAGACGAAATTGTGGAAGAAAAGATGTCAAAGAGAAATATTGTAGGGCTATTAGCTAAAGCTTTAGAAAGAGAAAACGACGATTTGCTTATTCTAGTCATAACGTTTCTTAAAAAGTTATCAATAATGCAATGTAATAAAGAAGTTATGGTAGGAAATTTGTGTGTGATTGATAGATTGCCTCGCATGTTAAATTCCAATAGTGCTGATCTCGTTCATTTGACATTGAAGCTTCTGTTTAATCTCTCTTTTGATAATAGAGCTAGATATAAGATTATAAAATCTGGAATGTTGCCGAAAATTATGAGTCTCTTAAgcGACGATAAGCATCAAGAAGTTGTACTTAAGATTTTGTACCATTTAAGTTACGAAGATGAAGTCAAACATCATTTTGTGGACTGTATAGGTTTGATAATCGACATGTTACTCTTAAATGTAggaaatgaaaatgataaaactaTGGTGGCGCTTTGTATAAATCTAGCTACCGATCAGTCTAATGCCCAGCATATTATTAAGAAGAATAGATTGCAAGCTTTAATAATGAGGTCTTTCACGTACCAAGATGCGATGCTGATGAAAATGTTGAGAAACATTTCAGACAATGCTGCTTCCGCTCCACCATTCATAgaATTTGTTGGAGATATTGCTAAAGCTGTAGTCGAATcgaaaaatgaagattttattagAGAATGCATTGGTATATTGAGTAACCTTCATCTACCGGATCTCGATTGGGCTGAAATATTCAAACACTTTGATATGATAAAGTGGGTCAAAAATATCATAACTAGCAATAACAGCGACGCGGAATTGGTATTACATGTTATAGTCTTATTGGGTACTGCGAGTACAGATGAGGGATGCTCAAATTTGTTTTGCGAAACTGATATTCTACCTTTACTTATTGATCTCCTGAAAACTCATCAGGAAGATGATGAAATTGTCCTTCAGATTGTTTATGTATTTCTAACAGCATTGTCGCATACTTCCAATATCGATTACATAGTAAACAAAAcagaAGCGCCAGCatatttaattgatttgttACAAGACAACAACAAAGTGATTGGCAAATTGTGTAACACTTGTCTCAATATAATTTCTGATCACGATAAAATTTGGGCTGATCGTATACGAATAGAAAAGTTCCGTAATCATAACCAACAGTGGTTGGCTATGGTGGATTCGCAGCAATTAGAGACCGAAGAAGAAGAGGAGGAAGACGAATTACCTCCGTATTTGAATACTGAGTATTTAAGCACTGCAGTGGTTCCGCCTTTATCAGaGTTGCATGATAATGCAGAAACTGAAATCATTTCAGATACAGATTTGGACATTAACTATTTCAATAATCAGGACAAAgaGGGTAGTTTTACACCAACtgaaagttattttaataatagagCTCAAAGCTCGTTATCAAATTCTCCATACTTGAGAAATTTGCCAGTTGATATATCACATTCTACACTGGAACCAACTGCCAGAGAATTTTTTCCTACCACTAGCACATCTGAAAGTCATAATGGAGCTGTTAAGAAGAGACCTCAAAATAAATTCAAGGATAAAGATAATATAAATTGGAGAAGgtACGGAAGTGGAAGAACTTTTAACAGTTCTAGACAAAATACATCTAGTAGTCAGTTTTCAATTTCCAGctatgataaaaatgataattcacaaaataatgaaCAGCATAGTGATAATCATAGAAATCCTATAAAATCTAATGAGAGATATCAAAGTAGTTCATCTTATGAAGATCGATATAATTCTGGATATGAAGACAATAATTCTTCAACCGGCTCTTCAAGAAATTTCAGAAATACTAAAAGATACGAAAATCATGAAGCAAAGTTACGGAGCAACTATAATGAGAGGAATTCAAGAaattatgatgataaaaaaaataacaaaaagcaaaataatttttcttatggtAGTGGGGAATCTGGCATGAGAAAAACTTACCAAAATCAAAGAAGAAGCTATAAATCTTATGACCAtagaaataaccaaaaattacGGGATGATCATGGGTATAATAACTGGAGAAAACAAAATGAGAAACCATCTGATTctaatttggttaaaaatagcaaaaaatTAAATGCTGCTTCTCAAAGGGAAAGGTTGGTAGAAATGCTCAATCGTCGTACCCTAGAGTGTCTCGTatgttgtgaaaaaataaaacatactgATAAAGTTTGGTCATGTTTATTATGTTGTCATATATTCCATCTTCACTGTGTGGTTGCTTGggcaaaatcatcgaaaataGAAAATGGTTGGAGGTGTCCTGCCTGCCAGAATGTCTGCAGTGAAGTTCCCAaacaatataaatgtttttgtgGAAAAACAATTGAACCTAGGTTTGAACCAGGAGTAATTCCCCATGGTTGTGGAGATATGTGTTTACGTAAGGGTCGGCATTGTGAGCACAAATGTTCCATTTTATGCCATCCAGGACCTTGTCCTGATTGCACTGTAATGATATCTAAATCATGTGGATGTGGTGCCACTCAGCAAATGGTAAAATGTAGCACAGACATAGAAATAACTTGCAACGCCATCtgcaataaatttttagaatgcGGCTTACACCGGTGCACACAATCTTGTCATACGGGTAATTGTGAATCTTGTAATAAAACGATTATACAAGAATGTTATTGTGCCAAAGAAGGAAGAAAGGTACCTTGTTGTGGTGAATACAAAGGTCAAACACAATATTCCTGTGGAGAATTATGTGATAAGATTCTATCTTGTGGAAATCACAGATGTGAGAAAATTTGTCATGAAGGTTCATGTGAGATGTGTACAACTGATGTTAATAATATTAGAACATGTCCTTGTGGAAGGACACGTCTCACTAAAGAAAGATTATCCTGTTTGGATCCTATTCCATGTTGCGATaagGTTTGTGGTAAAGTCTTTAAATGCGGACAACCAAATATGCCACACAGATGTGAAAATAATTGTCATGAAGGATCATGTCCCACTTGTCCTTTAACCACTGTTATCAAATGTCGTTGTGGTCATATGGATAAAGAAATACCTTGTTCAGAATTAACAACGAAAGCTGATGATGCCAGGTGTCAGAAAAAATGCACAAAAaaacGTTTGTGTGGTAAACACAAATGCAATCAACTATGTTGTATAGAAGTAGAACACGTATGTCCTCTTCCATGTAACCGTCTTCTATCTTGTGGTCAACACAGATGCGAACGTACATGTCATTCCGGCCGTTGTCCGCCGTGCGAAGAAACTAGCTTTGAAGAACTCTTCTGCGAATGCGGTGCAAGCGTATTATATCCTCCGATACCGTGCGGCACCAAACCGCCCAATTGTTCCAAACCTTGTTCAAAACCGCGTCCTTGCGGCCACGAAGTAAATCATTCCTGTCATACCGGAATGTGTCCGCCTTGCACCGTTTTATGTAAACGTTGGTGTTACGGACATCACGAACAGAGATCAGCCATTCCTTGTCATCAAGAATATTTCAGTTGCGGTTTGCCGTGTGGTAAGGATCTGTCGTGTGGGAGACACAAATGCATTAAACCTTGCCACGACGGACCGTGTCCTACGCCTTGTAAACAGCCGTGTACGGTACCGAGGGATTTGTGTGGACATACTTGTAGCAGACCATGCCATGAACCACCATGCCCTGAAAGTAGTTGTAAACAACTTGTTCCAGTGACTTGTTTATGTGGATTGCAAAAATCTACTAGACCTTGTATAGAAGTAGTTGATGAGTTCAAAAATATCCAAATGGctcaattgaaagaaaaaatgggCAGCTTGTCGACTAATTCTACAATAGATTTATCTGATATTTTGAATGCGCCTAAAAAACCAACTGTTCTTAAAATtttaGAATGTACTGAAGAATGTCGAGTTTTGGAAAGGAACAGAAGGCTAGCTATTGGTTTACAAATACGCAATCCAGATTTGAGTCAAAAACTTACACCGCGTTATTCTGATTTCCTCCGCCAATGGGCCAAAAAGGATCACCATTTTTGTCAAAAAGTACACGACAAGTTAACCGAATTAGTTCAATTAGCTAAAAATAGTAAACAGAAGAGCCGCTCCTATTCCTTCGAGTCGATGAATAGAGATAAACGTCACTTTATACACGAATACTGCGAACATTTCGGCGTCGAAAGTGCGGCTTACGATATGGAACCAAACAGGAATATTGTAGCAACTGCTATTAAAGATAAATCTTGGTTACCGAGTATGAGTTTGTTAGAATTTATTCAAAGAGAAAATGGACAGAGGAAAGTACCTGGGCCCGTGTTGGGTCGCGGTTCTAGCGGTAAAACTGAAACGGTCTCTTTGAAATTGCCTAGTAGAGTTCAAAGGCCCAGTACACCATCTCATGAAATCGTTGATCCCTTCAGATCATCGTAG
Protein Sequence: MEPEDAKFMRTERKPGSVDVHPNIDAICLNYDLDIQILASKENVIYGEKKSLKKIIELPMINSRTDCHALSKEVVNQCELIHHSRLPEVEQIIYYLKKRKLQNSGKGIGNLSDGDKIGFEKLSGGIQEANYNSLSEYIDLLYEGMAEKIKGAQLIQLLARDPENLEALATNETLISALGRVLREDWKRSIALSTHLVFTFFCFSMYSCFHEVILKCKVGSICMDIIDYELRRYDRWKADFEGSEAPSDIPIVRKPCPSSASMSEIPRSRIPEPVRPKSGNFSDSNISQIMEGSIYDDLTTSMEGIDDRKLTDEQKLKRFRTLVKKQEHLLRVAFYLLLNISEDEIVEEKMSKRNIVGLLAKALERENDDLLILVITFLKKLSIMQCNKEVMVGNLCVIDRLPRMLNSNSADLVHLTLKLLFNLSFDNRARYKIIKSGMLPKIMSLLSDDKHQEVVLKILYHLSYEDEVKHHFVDCIGLIIDMLLLNVGNENDKTMVALCINLATDQSNAQHIIKKNRLQALIMRSFTYQDAMLMKMLRNISDNAASAPPFIEFVGDIAKAVVESKNEDFIRECIGILSNLHLPDLDWAEIFKHFDMIKWVKNIITSNNSDAELVLHVIVLLGTASTDEGCSNLFCETDILPLLIDLLKTHQEDDEIVLQIVYVFLTALSHTSNIDYIVNKTEAPAYLIDLLQDNNKVIGKLCNTCLNIISDHDKIWADRIRIEKFRNHNQQWLAMVDSQQLETEEEEEEDELPPYLNTEYLSTAVVPPLSELHDNAETEIISDTDLDINYFNNQDKEGSFTPTESYFNNRAQSSLSNSPYLRNLPVDISHSTLEPTAREFFPTTSTSESHNGAVKKRPQNKFKDKDNINWRRYGSGRTFNSSRQNTSSSQFSISSYDKNDNSQNNEQHSDNHRNPIKSNERYQSSSSYEDRYNSGYEDNNSSTGSSRNFRNTKRYENHEAKLRSNYNERNSRNYDDKKNNKKQNNFSYGSGESGMRKTYQNQRRSYKSYDHRNNQKLRDDHGYNNWRKQNEKPSDSNLVKNSKKLNAASQRERLVEMLNRRTLECLVCCEKIKHTDKVWSCLLCCHIFHLHCVVAWAKSSKIENGWRCPACQNVCSEVPKQYKCFCGKTIEPRFEPGVIPHGCGDMCLRKGRHCEHKCSILCHPGPCPDCTVMISKSCGCGATQQMVKCSTDIEITCNAICNKFLECGLHRCTQSCHTGNCESCNKTIIQECYCAKEGRKVPCCGEYKGQTQYSCGELCDKILSCGNHRCEKICHEGSCEMCTTDVNNIRTCPCGRTRLTKERLSCLDPIPCCDKVCGKVFKCGQPNMPHRCENNCHEGSCPTCPLTTVIKCRCGHMDKEIPCSELTTKADDARCQKKCTKKRLCGKHKCNQLCCIEVEHVCPLPCNRLLSCGQHRCERTCHSGRCPPCEETSFEELFCECGASVLYPPIPCGTKPPNCSKPCSKPRPCGHEVNHSCHTGMCPPCTVLCKRWCYGHHEQRSAIPCHQEYFSCGLPCGKDLSCGRHKCIKPCHDGPCPTPCKQPCTVPRDLCGHTCSRPCHEPPCPESSCKQLVPVTCLCGLQKSTRPCIEVVDEFKNIQMAQLKEKMGSLSTNSTIDLSDILNAPKKPTVLKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFLRQWAKKDHHFCQKVHDKLTELVQLAKNSKQKSRSYSFESMNRDKRHFIHEYCEHFGVESAAYDMEPNRNIVATAIKDKSWLPSMSLLEFIQRENGQRKVPGPVLGRGSSGKTETVSLKLPSRVQRPSTPSHEIVDPFRSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -