Dcar000172.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- GATA4
- Assembly
- GCA_029229535.1
- Location
- CM055252.1:4855205-4865224[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 5.3e+03 -2.4 0.1 15 24 369 378 369 378 0.87 2 2 2e-16 7.4e-13 48.4 3.6 1 34 395 427 395 429 0.98
Sequence Information
- Coding Sequence
- ATGATTTGGCTTCTGGTATCTAGTCAGAAGCCAGAATGTTGTATACTGAACGGTTTCCGGGCAGAATTATATCCGGGTGTACAACTTTTGTTAGGGTTGATCGCAGCTTACGGGGAAAAGGAAAATAAGCAGCAATCTGAAGAACTTCTTGAAAATCTGACCACTTCCATAAATACTTTACCTCttgattttaaaatagaaaaaccagTGATACCTTTACAAAAAAAGGTTCCAATCTCTCCTAGAGAACCAACAGAAGTAGTAGCAACAAAGACAGTGGAAATTAAAAAGgaacctgtatataatgatgaAGAAGACGTACCTCATGAACCTAAGGAATTTGAAAGTAGTAGTGGAAATATTGTTCCCAAAGTTGAAGTAAGTGAGACGCTTCTACCTCCTCAAGATGTTTCTATGGATTTATCCAAAGATAATACTGAAGAACATCTGCGTGAACCGTTAATAAAGGTAAAACCCCCCAGTGCTTTACATTACACCCCCGAAAATAGTAATGTGGAGATATCAAATATTCCTAGGATTATAAGTCAAGATTTCAGCCGGTTTGTAGATAATGACAAAAGTGACAATACCAGTTCTATTGAACCCACTGATCTCTCGaataagaaaactgaaaaattaacaTGTGTGCCAGAAATAAGTTACATCAAAGAAGAAGCTGATGCTGTTTCCCTTTCAAGCAATAGCTCCGATCCAGAACGATTAGAGGTGGATATGTCTCAGGTAACCGAGGAGCAAAGCGATTCAACAAATAGCGCAACATCTCCTATTTCTGAGTCAGTGTTAAACCAAAATGAAATTGATCCTTCAGTATGGCAGACGCTTTCTCGAAATGGTTATAATCCTCCTCTAAGTGGGGAAGCAAGCCAGTTACTGAGGAAGCTCATAACCTGTCGAAAGTTAGGTATGACCATAACTCCAGCACAACCACATGTTTTAAACTATACTTTATTTGATGAGAGACAAGCACAAGCAGATagtattaatcaaaaaaatgcCTGTAGAAGAAAACAAAGCTATCCTTTAAAAGCAACTGTTCCACCTGAAGGGGCACCGATGGAACAAGATAATGAAGAATATGACTATGGGCCTGATAATTCTCTTATATTATGTAATATGGGAAAGGGAAAGagAATGGAATTGAAACGAATGGTAGCTATATCTTGTACAAATTGTGGTACTCAGACGACGACGATTTGGAGACGTAATCTGAGAGGAGAGATGGTATGTAATGCTTGTGGtctttatttcaaattacatGGAATTGACAGGCCTGTCACAATGCGAAGAGACACAATTCATACACGACGTAGAAGGCCAAAAGCAGCAGAATCAGAAAAACCTCCTCCCAAagAATATACAGAACACAACCCATTCAGTAATCATCCAGGACAATTCAGAGGAAAAATTGATCaaTTCAGTCCATTTAGTAATCCTCCAGTTCACACATACAAAGGAAAAATTGTTAAAGGATCTTCCAAAGAAAAAAGCAATACAGAATCATCCGACACGGAAGATATGTTGAGTGCATTGAGGCGTCAACTGCAACCTCATTTGGTGATGGCCTTACAAGGAcatcgaaataattttaattctaaCTCGGACAGTAGTCCGAAGATTCCGTCACGCGCACACATACAGGGTCCACCTTTACCAAATTTCTTGCCATTAGAGAAATCCAGTGGAGTCTCTACAAGGGAAGCCGTTTCCGATGAAGACAGCATAGCAGACTTACCGTTAAACCTTGTTTCAACACATATGACTGAGGgtgaattaatttaa
- Protein Sequence
- MIWLLVSSQKPECCILNGFRAELYPGVQLLLGLIAAYGEKENKQQSEELLENLTTSINTLPLDFKIEKPVIPLQKKVPISPREPTEVVATKTVEIKKEPVYNDEEDVPHEPKEFESSSGNIVPKVEVSETLLPPQDVSMDLSKDNTEEHLREPLIKVKPPSALHYTPENSNVEISNIPRIISQDFSRFVDNDKSDNTSSIEPTDLSNKKTEKLTCVPEISYIKEEADAVSLSSNSSDPERLEVDMSQVTEEQSDSTNSATSPISESVLNQNEIDPSVWQTLSRNGYNPPLSGEASQLLRKLITCRKLGMTITPAQPHVLNYTLFDERQAQADSINQKNACRRKQSYPLKATVPPEGAPMEQDNEEYDYGPDNSLILCNMGKGKRMELKRMVAISCTNCGTQTTTIWRRNLRGEMVCNACGLYFKLHGIDRPVTMRRDTIHTRRRRPKAAESEKPPPKEYTEHNPFSNHPGQFRGKIDQFSPFSNPPVHTYKGKIVKGSSKEKSNTESSDTEDMLSALRRQLQPHLVMALQGHRNNFNSNSDSSPKIPSRAHIQGPPLPNFLPLEKSSGVSTREAVSDEDSIADLPLNLVSTHMTEGELI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -